G73288


Basic Information

Item Value
gene id G73288
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 13097741 ~ 13098590 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU98857
tgaatcaaatcaaatcaaatcaaatttatttgtatagcgctttttacaactggtgttggcacaaagcagctttacagaaacatgattacaggacaaagaatcaggcaaaacattaaacacagaatatacataatacagaacccccagtgagcgcggaggcaaggaaaaactccctcagagctgcaggaggaggaagaaaccttgggaggaccaagactcacattaaaggggggaccatcctaccactggtcaaatggcttttaaattaatttaaaaaagtctttcatacatccacataggttttatatattcaggtgtatagcagctccactaatggcttatagagtaagatggatgatgagcagctgatctgtggtggtggatggagaagagctgtcttcagaaacttccagtctggccagacagaggacatgagagcctgagggtccaacatcccgcggtatcgggtcagacaggtgggcagtcagtaactcggaggaaggcagagagatggaattagttttgactggatttatgtaaaacagagaatattaaaacattatcagagtgtggctaatgactccggcagatctaaataaaacagcctaactaaaggcagagagccagaaggtaacatagacatggaggctccctgaaacactggcatccacccactccaccgtccacaaacctgagtgaccgtgtgcagtgggagaacaacagcaccagcatctcagtttaccacaatttcctctgtccatgaacccctgaatctgcagccttatctaaagggaaaaacattaattaccaaaagctaaactaaacaagtaagttttcagtctagacttaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU98857 True 850 lncRNA 0.43 1 13097741 13098590

Neighbor

gene id symbol gene type direction distance location
rag1 rag1,LOC107750737,LOC107670202 coding upstream 154779 12934452 ~ 12942962 (+)
LOC103044030 LOC103044030,LOC108428802,LOC108428756 coding upstream 188680 12897785 ~ 12909061 (+)
man2a2 man2a2,LOC107750719,LOC107720774,LOC107670215 coding upstream 382083 12680106 ~ 12715658 (+)
trnar-ucg_4 NA coding upstream 494317 12603352 ~ 12603424 (+)
fanci fanci,LOC107673243,LOC107670230,LOC107564606 coding upstream 510198 12568837 ~ 12587543 (+)
ehf ehf coding downstream 564219 13662809 ~ 13677076 (+)
pdhx pdhx coding downstream 595838 13694428 ~ 13765050 (+)
cd44 LOC106561308,LOC106573350 coding downstream 695823 13794413 ~ 13828422 (+)
fjx1 NA coding downstream 910042 14008632 ~ 14011720 (+)
trim44 trim44,LOC107716865 coding downstream 979422 14078012 ~ 14161299 (+)
G73214 NA non-coding upstream 145421 12947646 ~ 12952320 (+)
G73191 NA non-coding upstream 421393 12674986 ~ 12676348 (+)
G73189 unc45a non-coding upstream 428012 12663967 ~ 12669729 (+)
G73177 NA non-coding upstream 455919 12639245 ~ 12641822 (+)
G73146 fbxo31 non-coding upstream 532949 12564133 ~ 12564792 (+)
G73292 NA non-coding downstream 59179 13157769 ~ 13158679 (+)
G73298 NA non-coding downstream 127081 13225671 ~ 13225955 (+)
G73301 NA non-coding downstream 139370 13237960 ~ 13238212 (+)
G73332 NA non-coding downstream 411166 13509756 ~ 13510238 (+)
G73337 NA non-coding downstream 538426 13637016 ~ 13637702 (+)
LOC103043719 NA other upstream 199810 12871484 ~ 12897931 (+)
LOC103022150 brsk2a,brsk2b,LOC107707552,LOC107675281,LOC107600443 other upstream 2470777 10272919 ~ 10626964 (+)
G72621 NA other upstream 3015601 10078579 ~ 10082140 (+)
LOC103043718 LOC103043718,LOC108442465 other upstream 3127699 9968506 ~ 9970042 (+)
G72281 LOC107754548,LOC108274935,LOC107754545,LOC107754498 other upstream 3948322 9142899 ~ 9149419 (+)
G73533 NA other downstream 1550239 14648829 ~ 14649551 (+)
rpgrip1l rpgrip1l other downstream 1792944 14891534 ~ 14921003 (+)
svip svip other downstream 2473712 15572302 ~ 15577533 (+)
G74169 NA other downstream 3188086 16286676 ~ 16288329 (+)
G74649 NA other downstream 5356261 18454851 ~ 18455197 (+)

Expression


Co-expression Network