G73292


Basic Information

Item Value
gene id G73292
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 13157769 ~ 13158679 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU98861
ACCGcactctccagcccggccgacttccagcactccagcgcggccggcttccagctctccagcgcggccgacttccagcactccagcgcggccggcttccagctctccagcgcggccgacttccagcactccagcgcggccggcttccagctctccagcgcggccgacttccagcactctaGCCCGACCGGCTTCCAGCTCACCAGCCCGGCTGGCTTCCAGATCTTCGACTCCGGCTCCGgaagcaagctccggtccggtGTTGACAACCACGCCCACTGCTGAATCTGCAGCTCCTGTCCGGATCTTggcggcagccgcactctcaGCTCCCGCTGAAGCGGCTTCTTCGCCAGCGGTGCCAGCCGCCTCCAAGCCCGCGGTGGCAGCCGCCTCCACGTCAGCGGTGCCTGCCGCGCCCACgccagcaggacccaccgcctttgcttcagcgctgcccgcggctccggccgcctctgcttcagcgctgcccgcggctccggccgcctctgactctgtgcccgcggctccggccgcctctgacccagttcccgcggccccggccgtctctgacccagttcccgcggccccggccgtctctgacccagttcccgcggccccggccgtctctgacccagttcccgcggccccagccgcctctgacccagttcccgcggctccggccgcctctgactctgtgcccgctgtTACCCCAGTTCTTGTGCCTGGGGGTCCAGCCTCTGCTCCTGTGCCTACTCCCAGGTCACGAGCTCCtagacccgccgcgcctgctcaagctgcacccgccgcgcctgctcaagctgcacccgccgcgcctgctcaagctgcacccgccgcgcctgctcaagctgcacccgccgcgcctgctcaagctgcacccgccgcgcctg

Function

NR:

description
transposase-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU98861 True 911 lncRNA 0.72 1 13157769 13158679

Neighbor

gene id symbol gene type direction distance location
rag1 rag1,LOC107750737,LOC107670202 coding upstream 214807 12934452 ~ 12942962 (+)
LOC103044030 LOC103044030,LOC108428802,LOC108428756 coding upstream 248708 12897785 ~ 12909061 (+)
man2a2 man2a2,LOC107750719,LOC107720774,LOC107670215 coding upstream 442111 12680106 ~ 12715658 (+)
trnar-ucg_4 NA coding upstream 554345 12603352 ~ 12603424 (+)
fanci fanci,LOC107673243,LOC107670230,LOC107564606 coding upstream 570226 12568837 ~ 12587543 (+)
ehf ehf coding downstream 504130 13662809 ~ 13677076 (+)
pdhx pdhx coding downstream 535749 13694428 ~ 13765050 (+)
cd44 LOC106561308,LOC106573350 coding downstream 635734 13794413 ~ 13828422 (+)
fjx1 NA coding downstream 849953 14008632 ~ 14011720 (+)
trim44 trim44,LOC107716865 coding downstream 919333 14078012 ~ 14161299 (+)
G73288 NA non-coding upstream 59179 13097741 ~ 13098590 (+)
G73214 NA non-coding upstream 205449 12947646 ~ 12952320 (+)
G73191 NA non-coding upstream 481421 12674986 ~ 12676348 (+)
G73189 unc45a non-coding upstream 488040 12663967 ~ 12669729 (+)
G73177 NA non-coding upstream 515947 12639245 ~ 12641822 (+)
G73298 NA non-coding downstream 66992 13225671 ~ 13225955 (+)
G73301 NA non-coding downstream 79281 13237960 ~ 13238212 (+)
G73332 NA non-coding downstream 351077 13509756 ~ 13510238 (+)
G73337 NA non-coding downstream 478337 13637016 ~ 13637702 (+)
G73354 NA non-coding downstream 609446 13768125 ~ 13768360 (+)
LOC103043719 NA other upstream 259838 12871484 ~ 12897931 (+)
LOC103022150 brsk2a,brsk2b,LOC107707552,LOC107675281,LOC107600443 other upstream 2530805 10272919 ~ 10626964 (+)
G72621 NA other upstream 3075629 10078579 ~ 10082140 (+)
LOC103043718 LOC103043718,LOC108442465 other upstream 3187727 9968506 ~ 9970042 (+)
G72281 LOC107754548,LOC108274935,LOC107754545,LOC107754498 other upstream 4008350 9142899 ~ 9149419 (+)
G73533 NA other downstream 1490150 14648829 ~ 14649551 (+)
rpgrip1l rpgrip1l other downstream 1732855 14891534 ~ 14921003 (+)
svip svip other downstream 2413623 15572302 ~ 15577533 (+)
G74169 NA other downstream 3127997 16286676 ~ 16288329 (+)
G74649 NA other downstream 5296172 18454851 ~ 18455197 (+)

Expression


Co-expression Network