G73371


Basic Information

Item Value
gene id G73371
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 13828718 ~ 13830757 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU98957
gcaAATCTGAAAGATTATGCATGGAAAGATTTATATTTGCTGTGGAGACGCTGCAGGATATAACTCAAGAATAAGCAGAAGCAGAATCATTCAATTCTACTACTTTATGAACCATCACGTCCTGCATTATTCGCAAAGAAGATCACACGCCGCTATCCGTATTTTAAACCAAATTATGCAAAACTCTCATCAAAGTAAACAGAAATATTGTAAATTGCATATGAAAGACAAGAGTGATGTTGCATGAATCTATGATAGCATTTCCTGGACTACTTCTCTTCCAGCATGTTCTTTAATACTATACATTCAcggttttaaaaatacaaacaaatcagTGGTGAGTTCTTAAACATTGCATCATCAACATGAGCCaaaaatgagtttatatttaaactaattAAGGCAATTAATATGACAGTAAGAGAAAGATGAAGGAATGTTTGGAATAAATCTATTCTCTGGACATCGACTTTTAAAAGCTATGATAAACAAGCAAtggtatatacacacacaacattcaAAAAAGCATAAATTAAAGTAGCAACATTTTAttccattaaaagaaaaaacaaatgcataCATCCCAATCCAcaggaaaacaaaaatgaaacaaaacaaacagtaaacagaacaaaaatgaaacaaaacaaagaaaaaacatataagGTTAtaattgaaagaaaaataagagaaagatACATAACAACTTCAAAACACACATCAGCGGCCTGCATCATCCCTGTCCACTCAAAATGACACACCTCTATCCACTGGCAGTCTTCTGCATTTGcttgctgtttgtttgtgtgtgtgtttttttctcatcaCCCACAGCAGAGAAAAGTCCAGCACTAATTACTGCCAGACtcatatttacagttttacatcCCCCTCCCCAAACCTCGAACCCCGCCCTCTGTGTGTCCTAACACCGTATATTCCCTAATATTGCagtaacatttttaaaggaATTTCTCCAAACCCATAAGTTTAGATTTGAAATTAATTCGTATGGAGCATCATAGTAAATAGATTGTCAAACTAAATTAGATTTCAGCAATAAAACCAGCATGAATACTGACACCTAGAGAACAGTGAGAGTTTCACTCATCGTTAAAGAAATAGTCGCAGAAATAGTTGCGCTCAGAAGGAAGTGACTGATTGCAATGCCATCGAGCGTTGATAGCACGTCCAATAGCATCCAACACATTTTTATTCTGGTAATGCAGCTGGTCATGGCATAACATCTGTCTTCAGTGCAAGCTTTTAAGACAGCAGCAATAtatggacaagcattgtcctatTAAAACAGAGCACTGGCGTGTAcgttcagaaaaggtagggccGGCtaagagtggtccagcggggaGATCGcctgttcgaatcctgttcatgtagcttgccatcagctgccagagccctgagggagcacaattcacctttgctctctctctctgggtgggtagatggcactctcttcccacatcactacaaagggtgatgtcctcAGCACTaggtatctgtgagctgatgtatcagaaccgagtcgctgcgctttcctccgagcgctgGTGTttactgacttcacatgtactggaggaggcatgtgctactcttcaccctcctggtgttggggcatcactagtgatagggggagtcctaatgagtaaaTTAGaggtagggccactggttgcaggacctcattaacggAACACTGGGCTGTCAAAAGAGTAGTCTGCATTTAAGTCCAAAAGATAATGTGGAATTGTACGAAATTGCACCAAAAAAGCATGACACGAGGCCTTCTAGACATGACGTGATGTGTAACCACAAGTTGTTCATCATggtgcctccacacacagattTGTTGGTCATTTTCACAGTCAAGGGAAACTCATTGGACTCGTCACTGAATATTACTCACTCCATGACTGGCATGTCTGGCACAGcgacccaccaagtttcattcctgtaggttgattccttctgggtgcaactataaattttttttacgatgagtgtatataaatataatgaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU98957 True 2040 lncRNA 0.40 1 13828718 13830757

Neighbor

gene id symbol gene type direction distance location
rag2 rag2,LOC107581808,LOC107720771,LOC107673237,LOC107750738,LOC107670203 coding downstream 879279 12944453 ~ 12949439 (-)
LOC103043208 furin,furinb,LOC107581806,LOC107720773,LOC107750721 coding downstream 957336 12722277 ~ 12871382 (-)
unc45a unc45a coding downstream 1154196 12662741 ~ 12674522 (-)
gdpgp1 NA coding downstream 1166911 12658893 ~ 12661807 (-)
rhcg rhcg coding downstream 1176802 12638871 ~ 12651916 (-)
LOC103022766 NA coding upstream 2796 13833553 ~ 13848142 (-)
slc1a2 slc1a2,slc1a2b,LOC107740049,LOC107570361 coding upstream 30793 13861550 ~ 13909603 (-)
pamr1 pamr1,LOC102307280,LOC107570358 coding upstream 89416 13920173 ~ 13964026 (-)
LOC103024229 LOC108428793 coding upstream 559928 14390685 ~ 14460388 (-)
cib1 cib1,kip1 coding upstream 720115 14550872 ~ 14554955 (-)
G73322 NA non-coding downstream 411256 13416657 ~ 13417462 (-)
G73302 NA non-coding downstream 590404 13237953 ~ 13238314 (-)
G73281 NA non-coding downstream 740282 12989186 ~ 13088436 (-)
G73238 NA non-coding downstream 967090 12861113 ~ 12861628 (-)
G73176 NA non-coding downstream 1204300 12621682 ~ 12624418 (-)
G73429 NA non-coding upstream 175995 14006752 ~ 14007149 (-)
G73432 NA non-coding upstream 207312 14038069 ~ 14038368 (-)
G73434 NA non-coding upstream 239742 14070499 ~ 14072038 (-)
G73491 NA non-coding upstream 445922 14276679 ~ 14277106 (-)
G73509 NA non-coding upstream 636865 14467622 ~ 14468141 (-)
G73172 NA other downstream 1207362 12610834 ~ 12621356 (-)
fbxo31 fbxo31,LOC107675295,LOC107751272,LOC107742043,LOC107662464 other downstream 1263740 12548690 ~ 12564978 (-)
LOC111193053 tnni2a.2,LOC108428758,LOC108275295,LOC103035007,LOC107549280,LOC107595232 other downstream 1777229 12048626 ~ 12051489 (-)
LOC111193052 NA other downstream 2283472 11520887 ~ 11545246 (-)
LOC111193093 NA other downstream 2602764 11224779 ~ 11225954 (-)
LOC103025073 dynlrb2,LOC103025073,LOC106573385 other upstream 711439 14542196 ~ 14545536 (-)
hbp1 hbp1,LOC107732286,LOC107701066 other upstream 878301 14709058 ~ 14797283 (-)
LOC103037068 cpne8,LOC108274474,LOC107679956,LOC107752477,LOC107723993,LOC105026415,LOC106561599,LOC105028206 other upstream 1293057 15123814 ~ 15214284 (-)
LOC103040324 NA other upstream 1550572 15381329 ~ 15414613 (-)
LOC103046265 pkp3 other upstream 1927546 15758303 ~ 15780678 (-)

Expression


Co-expression Network