G73415


Basic Information

Item Value
gene id G73415
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 14162827 ~ 14163220 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU99012
cagaaagtgtgcaataattcttgaAACAAAATGTGGCAGGTGCATAAATATGGACACCCTAAATTTTTAGTTCAGATTTTTAGATCCtctgccacttcaggtcttaactagaactgtgtctgtgatttttcatttcctcactatgttcctcacagtggaaactgacagcagAAATCTCTGAGACTGAGCTTTTTCTATCATTCCTccaaaccatgatgttgaacaatctttgttttcaggtcatttaagAGTTCTGTTTTGAAGCTTCCATGTTGCCTTCAGAAAAGATGCAAAAAGAAGACAGACTTGCAATTGGCTCCTTAACCTTTTCTCATAATTCAGGATTCAACCGTGTATGTAGTTCAAACGTCAAaactgcctaattttgtttaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU99012 True 394 lncRNA 0.37 1 14162827 14163220

Neighbor

gene id symbol gene type direction distance location
trim44 trim44,LOC107716865 coding upstream 1528 14078012 ~ 14161299 (+)
fjx1 NA coding upstream 151107 14008632 ~ 14011720 (+)
cd44 LOC106561308,LOC106573350 coding upstream 334405 13794413 ~ 13828422 (+)
pdhx pdhx coding upstream 397777 13694428 ~ 13765050 (+)
ehf ehf coding upstream 485751 13662809 ~ 13677076 (+)
ldlrad3 ldlrad3,LOC106573355 coding downstream 74819 14238039 ~ 14389321 (+)
rccd1 NA coding downstream 383577 14546797 ~ 14550920 (+)
LOC103025904 metap2,metap2b,LOC108428789,LOC108275287,LOC107569354,LOC107701059 coding downstream 392800 14556020 ~ 14562537 (+)
LOC103026417 LOC108428785 coding downstream 427383 14590603 ~ 14595936 (+)
slc25a3 slc25a3,slc25a3b,LOC107732290 coding downstream 434745 14597965 ~ 14605957 (+)
G73423 NA non-coding upstream 92443 14070044 ~ 14070384 (+)
G73422 NA non-coding upstream 94033 14068583 ~ 14068794 (+)
G73419 NA non-coding upstream 155692 14006822 ~ 14007135 (+)
G73417 NA non-coding upstream 157603 14004653 ~ 14005224 (+)
G73416 NA non-coding upstream 159401 14003072 ~ 14003426 (+)
G73414 NA non-coding downstream 124 14163344 ~ 14164340 (+)
G73443 NA non-coding downstream 1574 14164794 ~ 14165656 (+)
G73464 NA non-coding downstream 103556 14266776 ~ 14269724 (+)
G73468 NA non-coding downstream 160745 14323965 ~ 14324623 (+)
G73514 dynlrb2,LOC103025073,LOC106573385 non-coding downstream 378978 14542198 ~ 14545513 (+)
LOC103043719 NA other upstream 1264896 12871484 ~ 12897931 (+)
LOC103022150 brsk2a,brsk2b,LOC107707552,LOC107675281,LOC107600443 other upstream 3535863 10272919 ~ 10626964 (+)
G72621 NA other upstream 4080687 10078579 ~ 10082140 (+)
LOC103043718 LOC103043718,LOC108442465 other upstream 4192785 9968506 ~ 9970042 (+)
G72281 LOC107754548,LOC108274935,LOC107754545,LOC107754498 other upstream 5013408 9142899 ~ 9149419 (+)
G73533 NA other downstream 485609 14648829 ~ 14649551 (+)
rpgrip1l rpgrip1l other downstream 728314 14891534 ~ 14921003 (+)
svip svip other downstream 1409082 15572302 ~ 15577533 (+)
G74169 NA other downstream 2123456 16286676 ~ 16288329 (+)
G74649 NA other downstream 4291631 18454851 ~ 18455197 (+)

Expression


Co-expression Network