G73417


Basic Information

Item Value
gene id G73417
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 14004653 ~ 14005224 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU99014
cATACCTGtcaaattttagattaaaaaataagggatattttcctctgtccgcttaaagttgtcccaccagcccaacgtaggttcagtatcccttacattttaagacaggtttacaaaaaaaatctaaaataacgacatgtgaaccacttacacacaattagattatcagaatctgaaattctgcaaactgaatcttttgatcactccacccctgatcaggggtgggtttcccgaaagcttcgtaacgctaagaacttcgttaactcgtacttaagattgatcgttaattaaagagtgtttcccaaaccggtgcgtaactaaagtactacgtaaactcgctcgcagattaacgagtgccctgACCCACTCGTTATTCTtaagagcttctttagggg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU99014 True 395 lncRNA 0.39 2 14004653 14005224

Neighbor

gene id symbol gene type direction distance location
cd44 LOC106561308,LOC106573350 coding upstream 176231 13794413 ~ 13828422 (+)
pdhx pdhx coding upstream 239603 13694428 ~ 13765050 (+)
ehf ehf coding upstream 327577 13662809 ~ 13677076 (+)
rag1 rag1,LOC107750737,LOC107670202 coding upstream 1061691 12934452 ~ 12942962 (+)
LOC103044030 LOC103044030,LOC108428802,LOC108428756 coding upstream 1095592 12897785 ~ 12909061 (+)
fjx1 NA coding downstream 3408 14008632 ~ 14011720 (+)
trim44 trim44,LOC107716865 coding downstream 72788 14078012 ~ 14161299 (+)
ldlrad3 ldlrad3,LOC106573355 coding downstream 232815 14238039 ~ 14389321 (+)
rccd1 NA coding downstream 541573 14546797 ~ 14550920 (+)
LOC103025904 metap2,metap2b,LOC108428789,LOC108275287,LOC107569354,LOC107701059 coding downstream 550796 14556020 ~ 14562537 (+)
G73416 NA non-coding upstream 1227 14003072 ~ 14003426 (+)
G73404 NA non-coding upstream 81357 13922601 ~ 13923296 (+)
G73359 NA non-coding upstream 173888 13828719 ~ 13830765 (+)
G73361 NA non-coding upstream 210495 13791330 ~ 13794158 (+)
G73354 NA non-coding upstream 236293 13768125 ~ 13768360 (+)
G73419 NA non-coding downstream 1598 14006822 ~ 14007135 (+)
G73422 NA non-coding downstream 63359 14068583 ~ 14068794 (+)
G73423 NA non-coding downstream 64820 14070044 ~ 14070384 (+)
G73415 NA non-coding downstream 157603 14162827 ~ 14163220 (+)
G73414 NA non-coding downstream 158120 14163344 ~ 14164340 (+)
LOC103043719 NA other upstream 1106722 12871484 ~ 12897931 (+)
LOC103022150 brsk2a,brsk2b,LOC107707552,LOC107675281,LOC107600443 other upstream 3377689 10272919 ~ 10626964 (+)
G72621 NA other upstream 3922513 10078579 ~ 10082140 (+)
LOC103043718 LOC103043718,LOC108442465 other upstream 4034611 9968506 ~ 9970042 (+)
G72281 LOC107754548,LOC108274935,LOC107754545,LOC107754498 other upstream 4855234 9142899 ~ 9149419 (+)
G73533 NA other downstream 643605 14648829 ~ 14649551 (+)
rpgrip1l rpgrip1l other downstream 886310 14891534 ~ 14921003 (+)
svip svip other downstream 1567078 15572302 ~ 15577533 (+)
G74169 NA other downstream 2281452 16286676 ~ 16288329 (+)
G74649 NA other downstream 4449627 18454851 ~ 18455197 (+)

Expression


Co-expression Network