CI01000009_05110455_05136845


Basic Information

Item Value
gene id CI01000009_05110455_05136845
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 5110205 ~ 5138314 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000009_05110455_05136845.mRNA
ACTGATTCTGTCCTTTTTCCTCATTATTTAATTTCTTTTATTACAGTTTTAGAAATACTCACTGCCGGAGCTGTGGCATGGTGGCTATCACGTGAGCTGGCTCCGGCTGTTACTGATCCTATTCCTCAATATCTTGTCTAATAGCATAATAGTGCCAGCAAGACATCAAGATGACATCACAGTCAAAGGTCATTTCTTAATCGGTATTTTTGTTGCGTTTTCCATTTAAATTAAAGGCGCAATATGTAATATTTTTGGATTAATATATCCAAAAACCACTAGTGTGAGATATATATTTGACTTGTGTACTTATATTATCCCAGAAGTTTCCAAGAATGTTTAAATCCAGAGAAATAAGAAATTTTAACCAGTACACGGAATGTGTCCATACGTCTCCTATCAATGACATCATACCCTCAATTTCCGGTTTTATTTTGCAGAAACCATGGAAACACCAAAGACGCTTTAATATATTATGTGCTTTATTCGAAAAGTGAGCAACTGTTTTGATACCTTCATCGACAGAAAACTAATCATTGTTATATAGCTCAACAAAGTAAGTCTTATTGTTTAAATTTCATTTTCTTGATTTACCGCAAGTACCATGTTTTACCATGCCTAATATCGATCTAAGTGTCTCGTAGCCGCCGAGCGTACGCACAGAGTAACGTTATAACATCATTTTCAACACACTCAAATGTATCTAATATGATAAAACAGCGCTGCTTTACCCCACATACGCTTGACCGGAAGAAGCAGAAGCGGTCGCCTGCGGCATAATAAAAGTTTTGCTGCGCTCGAGCCATGTGTCGCGCTTGTCTCTCATAAGCAATCACTCCAGTGGCCTTGTTCCGCTCCAACGGCTTTCAGCCACACCCTGCTTCATTCTACAGTAATGTTAATAAATCTTTAATACATTAGCTCATCCATGAATATTTCTGCTCAAGTCTTGTCGGATTCTTTTCCACCGGCTGTAGACGTGAAGACAACACCTCCCAAGGCGTCATCAACCTCTAGCGGTTGAAATTTACATATTGTACCTTTAACTAAACATCCTTAAAACACTCTTATGCAAAACCGCATAAGATATTAAGACTTGTTTCAGAGAATATATCTTGATTTAGCAGATACATTTTTTTTTTTTTTAAATATGCTTCTCAAGTTAGTTTGTTGTTTTAAGTATGTTTAGATGTTACTGGAAAATGAGACAAAAATATTGACATTTTTTTTGCAGTGTTGTACATGTATACGCTATATGTGAGAGAACTGTTGGAGAGAAGATGACTTGACATCTTACCTATCACATTGCTCAAGCTTTGAAATCATTGGTTCAGTTCCAGGCCTCTTTCAGCCTATTGAATGTTGAACCAATGAATCACCATCTAACATAACATACCTTGAACTACAAAGAGGTGACGTGAGCTCCGCATGCAATCTGATCGTGTCAGTGAGCACTGAGAGTTGAGATGATGTGTAACCCCAGGCTATCTGTGATAGACACATACAGTATTACAGGCTGGTGGGCAATTGGAGAAAGGTGTGTTACTGGATACGGCTGGACGTGGCTAGACTGTGAGGACATAATACAAGCTGACACAAGTTCAGATTGGAGGATGGCCCTTTTGCCGCCTTCTCAGATTTGGTTTGACCACCCACGCGGTTCTCTAGCGTGGGTAGCCAGAGCGAAAGAAGCCAAGATTGGTCAAATGAGGGGGTATGTACAGGTGCATTCCAGAGGCCCGCCTTGGCAGCTAGAGGAGAGGTCGGCCTCCGTCAACATGACAGTGTTGCCACGGTACGTGGCTTCCCTGGCTGTGCCTGGCCTTATCCTCTGTTTCATCACTCTTCCATTTCCTGCTATACTATCCCAGAGGCCCCCTCTCCCCACAGAGCCCTCCCCCACCCCAGCACCCCACACAAGGCCGGAGTGTACCCGCCTAGAGCACCCCGTCGTCTCTATTCAAGAGGCACTGAAGCCTGAACTGTTCTGTCATGTTGTTGGACCCTCTGTCACCACAGACACAGAAAATGTTGACGTGCTACGCTTCAATGGCCATTTGAAATTGGCAGCCCAGGTATCTCTCATTGGCTTTGTGAAAGCTCTAAGTCCTTTGATCTCAACTTTCTCCCATCCTGGTGTAAGGGACTACTCCCAGCTGACCCTTGACCTCACCAGGAATGAACTTATAGTGGGAGCGAGAAACTACCTCTTCAGACTAAATCTAAGCAACATTTCACTAATTCAGATCATGATTCCTGCTTGATGTGGCCTTTGTAACTTTTTGGCTAGGGCTGTCTATCAAGCCTTTGGGTGTTAGAGAGTGCTGGCTTATGGTTATTGATTCTGAAATGAATGGGTCAGCTCCCAAAACCGCCTGGACAAACTTCATAGGAAGTGGCATTGCCTGGCACAGAGAGCAAGGGCCATCCTTAGTGAATGTACCAAGAGTTTACTCTGGCTTGGTGCTAAAACCCCTAAGAAGGTCAGCCAGGACTGTCTGAGGTCTAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000009_05110455_05136845.mRNA True 2514 mRNA 0.43 7 5110205 5138314

Neighbor

gene id symbol gene type direction distance location
CI01000009_05046374_05094978 SEMA5B, SEMA5BA coding downstream 14232 5046300 ~ 5095973 (-)
CI01000009_04976520_04987680 NA coding downstream 122498 4976486 ~ 4987707 (-)
CI01000009_04888729_04895882 NA coding downstream 213726 4888197 ~ 4896479 (-)
CI01000009_04778332_04780190 NA coding downstream 323989 4778053 ~ 4786216 (-)
CI01000009_04738315_04741396 RALB.S, RALBA, RALB.L, RALB coding downstream 367779 4738229 ~ 4742426 (-)
CI01000009_05190789_05192684 NA coding upstream 52180 5190494 ~ 5192890 (-)
CI01000009_05278137_05361256 ADCY5 coding upstream 138823 5277137 ~ 5361478 (-)
CI01000009_05362086_05363378 NA coding upstream 223728 5362042 ~ 5364081 (-)
CI01000009_05367161_05370504 PTPLB, HACD2, DKFZP459B2333 coding upstream 227621 5365766 ~ 5370504 (-)
CI01000009_05402729_05410456 NA coding upstream 264190 5402504 ~ 5410456 (-)
G53415 NA non-coding downstream 93047 5013895 ~ 5017158 (-)
G53173 NA non-coding downstream 263102 4846901 ~ 4847103 (-)
G53167 NA non-coding downstream 271434 4838462 ~ 4838771 (-)
G53133 NA non-coding downstream 279438 4820723 ~ 4830767 (-)
G53132 NA non-coding downstream 300436 4804438 ~ 4809769 (-)
G53476 NA non-coding upstream 102110 5240424 ~ 5241350 (-)
G53425 NA non-coding upstream 111976 5250290 ~ 5251759 (-)
G53487 NA non-coding upstream 231266 5369580 ~ 5369781 (-)
G53490 NA non-coding upstream 235956 5374270 ~ 5374719 (-)
G52828 NA other downstream 878736 4217420 ~ 4231469 (-)
CI01000009_03261739_03262843 NA other downstream 1848248 3261038 ~ 3262843 (-)
CI01000009_02885473_02893975 NA other downstream 2210798 2883688 ~ 2893975 (-)
G52410 NA other downstream 2547672 2551724 ~ 2562533 (-)
G53515 NA other upstream 364081 5502395 ~ 5505248 (-)
G55814 NA other upstream 3287507 8425821 ~ 8428012 (-)
CI01000009_08858198_08860555 NA other upstream 3719838 8856310 ~ 8860563 (-)
G59097 NA other upstream 7149903 12288217 ~ 12289518 (-)
CI01000009_13975122_13976026 NA other upstream 8837074 13975099 ~ 13978614 (-)

Expression


Co-expression Network