G73443


Basic Information

Item Value
gene id G73443
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 14164794 ~ 14165656 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU99043
ggacagttctggtggaaacagaagagttgaggtgcacattgaattctccgtgatttgggcagccgtggttttatgttttttggagacaatccgggttagcacccgaacatccctttcagacagattcctctcgcgtccacagttaatcctgttggatgtggttcgtccttcttggtggtaagctgacattaccctggatactgtggctcttgatacatcacaaagacttgctgtcttggtcacagatgcgccagcaagacgtgcaccaacaatttgtcctcttttgaactcttttggtatgtcacacataatgttgtgtgcattgcaatattttgagcaaaactgtgctcttaccctgctaattgaaccttcacactctgctcttactggtgcaatgtgcaattaatgaagactggccaccaggctgctccaatttagccatgaaacctcccacactaaaatgacaggtgtttcagtttcattgtccaacccctgtatgcaGCCTAGTATTAATTTGTCCATGGCAGAGATACAAGAGAACTCGAGCaaaatgtcccaactaagctttaatatatctgcattttacTAAAAAGCATTCATATTCAATGGGTatacacctctggaaaaaaattaagagaccacttcagtttctgaatcagtttctctgattttgctatttatatgtttgagtaaaataaacattgctgttttattctactaactacggacaacatttctcccaagttccaaataaaaatcttgtcatttagagcatttatttgcagaaaataagaaatggctgaaataacaaaaaagatgcagagctttcagatctcaaataatgcaaagaaatttagttcata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU99043 True 863 lncRNA 0.39 1 14164794 14165656

Neighbor

gene id symbol gene type direction distance location
trim44 trim44,LOC107716865 coding upstream 3495 14078012 ~ 14161299 (+)
fjx1 NA coding upstream 153074 14008632 ~ 14011720 (+)
cd44 LOC106561308,LOC106573350 coding upstream 336372 13794413 ~ 13828422 (+)
pdhx pdhx coding upstream 399744 13694428 ~ 13765050 (+)
ehf ehf coding upstream 487718 13662809 ~ 13677076 (+)
ldlrad3 ldlrad3,LOC106573355 coding downstream 72383 14238039 ~ 14389321 (+)
rccd1 NA coding downstream 381141 14546797 ~ 14550920 (+)
LOC103025904 metap2,metap2b,LOC108428789,LOC108275287,LOC107569354,LOC107701059 coding downstream 390364 14556020 ~ 14562537 (+)
LOC103026417 LOC108428785 coding downstream 424947 14590603 ~ 14595936 (+)
slc25a3 slc25a3,slc25a3b,LOC107732290 coding downstream 432309 14597965 ~ 14605957 (+)
G73414 NA non-coding upstream 454 14163344 ~ 14164340 (+)
G73415 NA non-coding upstream 1574 14162827 ~ 14163220 (+)
G73423 NA non-coding upstream 94410 14070044 ~ 14070384 (+)
G73422 NA non-coding upstream 96000 14068583 ~ 14068794 (+)
G73419 NA non-coding upstream 157659 14006822 ~ 14007135 (+)
G73464 NA non-coding downstream 101120 14266776 ~ 14269724 (+)
G73468 NA non-coding downstream 158309 14323965 ~ 14324623 (+)
G73514 dynlrb2,LOC103025073,LOC106573385 non-coding downstream 376542 14542198 ~ 14545513 (+)
G73529 LOC107551388,LOC107676462,LOC108428784,LOC107701063,LOC107754325 non-coding downstream 448762 14614418 ~ 14619324 (+)
G73527 NA non-coding downstream 472291 14637947 ~ 14638553 (+)
LOC103043719 NA other upstream 1266863 12871484 ~ 12897931 (+)
LOC103022150 brsk2a,brsk2b,LOC107707552,LOC107675281,LOC107600443 other upstream 3537830 10272919 ~ 10626964 (+)
G72621 NA other upstream 4082654 10078579 ~ 10082140 (+)
LOC103043718 LOC103043718,LOC108442465 other upstream 4194752 9968506 ~ 9970042 (+)
G72281 LOC107754548,LOC108274935,LOC107754545,LOC107754498 other upstream 5015375 9142899 ~ 9149419 (+)
G73533 NA other downstream 483173 14648829 ~ 14649551 (+)
rpgrip1l rpgrip1l other downstream 725878 14891534 ~ 14921003 (+)
svip svip other downstream 1406646 15572302 ~ 15577533 (+)
G74169 NA other downstream 2121020 16286676 ~ 16288329 (+)
G74649 NA other downstream 4289195 18454851 ~ 18455197 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G238754 NA non-coding CI01000055 null 2216637 ~ 2228752 (+)