CI01000009_05190789_05192684


Basic Information

Item Value
gene id CI01000009_05190789_05192684
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 5190494 ~ 5192890 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000009_05190789_05192684.mRNA
ATATCATATTTGAAATGATCATGCTGCGTCAGACACGCTGTAGTGCCACCACCTGGATGTGACAGTGGTACCACACGTCTTGACTCTTGATTGTATTGAATCACCTCCCTCATCACATCCACAGCTGCTTAATGCATATTGCAGCTTGCAGTGTTTGGGCGTGTAACGTATTTTCACAGTGTGCAGTAATGTGACAGCTCTCAAAAATGAAAGCAACTTTCAAGAGTCAAGCCAATAGATTTACACATGGTGTTTTCTTTGCATCATTTATTTATAAAAACATAAATTTAAAGCACAGCGCAGTAAAGCAGCTGCAGGTCGATCGGTGGAAGTCATTCACAGAAAAGGGATACTGCACAGGAGACCTACGCAAAGCGGAGATTGCGGTTTATGCGTTGCGTTTTACGTACGATAGAGTTTACTTCAGAGGAAGGACATCAGAAGACTCCTTATCTAATAAAAATGGATATTGGCAGATTTTCTCTCTTTATGGTGATAAAACAACCCTCATTGGGAATGTCATGTCGTGTAAACAGTGTTTTCCTCTCATTTTATTAAAGAACATGAATGTTTTATATGAACAGGATTCAGTAGAGTATTCCTTTATCCTGACAAGGAATTTACTCGCTGCTCACGTTCTGTTCAAGATCCGAGGAATTTTGCTTTGGAATCGAAACGTTCGCCCTCTCAAGCTCCCAGTAAAATACGCTATATTTCACTCTCTTTACCATCCTTTGGCATTTGAGGGGTTTTCCTCGTGCATATTTTCTTACTTTTCACCGAGAATATCTACTTTTGCACAGAATGTGCGAATAAGCCTCTCAGAAAAGGTGGAGGGAAGGATTTATCATCTCTCGGGTACCTACAGTAGGCTATATCTTAGTGTTTTCGAGCAACTTTATAAGCGTTAACAGAAAAGCTATTCATATTTCTTTTATTATTTGAATACAGAAACCGGTATTTGGCTTTTTTCAGTCAGTATTTTTGAGTGAATGATAGGCTACTGTCACTCAGCTGTCATATGTGAATGATGTGCAATGATGTTATTTAGAAAGGAAGAGAAGACTTTTTTGTAATACAACCTATATTTTTTCATAGGCACATATAACAGCAACAGTAAAGTTTCTTTTCTTTCTATAACTTAAGCTCGCTTTACAACACAAAAACAAAGGCGCCAATGCCGAAAAACAGGTAGTCTCCAATAAA

Function

NR:

description
PREDICTED: uncharacterized protein LOC107555899

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000009_05190789_05192684.mRNA True 1206 mRNA 0.38 3 5190494 5192890

Neighbor

gene id symbol gene type direction distance location
CI01000009_05110455_05136845 NA coding downstream 52180 5110205 ~ 5138314 (-)
CI01000009_05046374_05094978 SEMA5B, SEMA5BA coding downstream 94521 5046300 ~ 5095973 (-)
CI01000009_04976520_04987680 NA coding downstream 202787 4976486 ~ 4987707 (-)
CI01000009_04888729_04895882 NA coding downstream 294015 4888197 ~ 4896479 (-)
CI01000009_04778332_04780190 NA coding downstream 404278 4778053 ~ 4786216 (-)
CI01000009_05278137_05361256 ADCY5 coding upstream 84247 5277137 ~ 5361478 (-)
CI01000009_05362086_05363378 NA coding upstream 169152 5362042 ~ 5364081 (-)
CI01000009_05367161_05370504 PTPLB, HACD2, DKFZP459B2333 coding upstream 173045 5365766 ~ 5370504 (-)
CI01000009_05402729_05410456 NA coding upstream 209614 5402504 ~ 5410456 (-)
CI01000009_05513478_05515588 NA coding upstream 320379 5513269 ~ 5515588 (-)
G53415 NA non-coding downstream 173336 5013895 ~ 5017158 (-)
G53173 NA non-coding downstream 343391 4846901 ~ 4847103 (-)
G53167 NA non-coding downstream 351723 4838462 ~ 4838771 (-)
G53133 NA non-coding downstream 359727 4820723 ~ 4830767 (-)
G53132 NA non-coding downstream 380725 4804438 ~ 4809769 (-)
G53476 NA non-coding upstream 47534 5240424 ~ 5241350 (-)
G53425 NA non-coding upstream 57400 5250290 ~ 5251759 (-)
G53487 NA non-coding upstream 176690 5369580 ~ 5369781 (-)
G53490 NA non-coding upstream 181380 5374270 ~ 5374719 (-)
G52828 NA other downstream 959025 4217420 ~ 4231469 (-)
CI01000009_03261739_03262843 NA other downstream 1928537 3261038 ~ 3262843 (-)
CI01000009_02885473_02893975 NA other downstream 2291087 2883688 ~ 2893975 (-)
G52410 NA other downstream 2627961 2551724 ~ 2562533 (-)
G53515 NA other upstream 309505 5502395 ~ 5505248 (-)
G55814 NA other upstream 3232931 8425821 ~ 8428012 (-)
CI01000009_08858198_08860555 NA other upstream 3665262 8856310 ~ 8860563 (-)
G59097 NA other upstream 7095327 12288217 ~ 12289518 (-)
CI01000009_13975122_13976026 NA other upstream 8782498 13975099 ~ 13978614 (-)

Expression


Co-expression Network