G73529 (LOC107551388,LOC107676462,LOC108428784,LOC107701063,LOC107754325)


Basic Information

Item Value
gene id G73529
gene name LOC107551388,LOC107676462,LOC108428784,LOC107701063,LOC107754325
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 14614418 ~ 14619324 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU99154
GTGGCTTTCTccatgtaaaaatgtacagcagtcttatacattgtttaaaatacatatttacaaaGTGTGTGTTTCACAAAGGCTACTAATTGACtgagctggaaaaaaaaaaatggagtgaCATAATGAGTTGATGGGTTGTGGCTCGTCCAGTTTAAAGCACTCGTAACACATTCAACACAGCACACTTTAAAAAGCAGTTGGCACCTTAAAGCGTCACAAGGATCCAGTAACACCTTCATACAGAACCTAAAGAGATCTCTATGTAACAGCGTACAAAAGAAATAGTGAATGTAGCAGTCCTTTCAGAAGAAGCAGGCCAATGGGCCATGATTATACAGTCAGTCAATCAAAATATGCCCTTTGTTGGTTCAACAAGTCCATGTTACCTCCATGATGGAGGTAAGCAAAGTAATAACCACATAACTGGGCCCAATTTGGGCTGGTGGATCAGTTCCCAAAAATAACAGCTCTCCATAGGTAACAACTTGTGCCCAATAAAAGCACCACCTCCTCTCAAAGATGAGAGTTTCTCATGTCTGAGATTCACTGGGAGTGTTACCAGAAGGGCATCAAATTATACATCAGCGTACAGCTGAAAACTTTAAATAAGTGGCGATCACTCCTAAgatgaaaaatatttcaaagtcCGTTATACCATTGTGTTGCTCTCGCCAACTTTATCCACCAaACCACTTATTCCAGGGAGATTGAGCAGTGATCCAAGAATTGGTATTCTTCTAATAAAGCCGACCGCGACTGGGAAAAAGCCCcTAAAGAGAAGGAAGAACCCATAAACCTCCAGGACCACGCCGATGATTGGCCACCCGATCAACACCACAAACACGCCACCCAGGAAGAAACCTGTAGCTTTCATTTTGTGCCGCTGGAAAAAGAATCTGAAGGTTCGTTCCAGTCCAATAACGAAGGAGAGGCCTGCAACAAACAAGATATTCCCTATGGCCAGCAGAGCTTTATCAAAGAACAGGATCATCCcaaagaagaggaagaacacGCCGAAGCCCGTCAGACCCATCCCGATCTTCTGGGAGTCCGTTAGGGAGATCATCTTCACTCTGTGAACTTTGTTTCCGCGCTGACTGATTGCTGATAGCGGAGGAA

Function

NR:

description
PREDICTED: vesicle transport protein GOT1B-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU99154 True 1122 lncRNA 0.43 5 14614418 14619324

Neighbor

gene id symbol gene type direction distance location
LOC103028647 ldhbb,LOC103028647,LOC108428782,LOC108275055,LOC105895664,LOC103366875,LOC106573069,LOC107744904,LOC107659842,LOC107589975,LOC107586539 coding upstream 28 14607589 ~ 14614390 (+)
slc25a3 slc25a3,slc25a3b,LOC107732290 coding upstream 8461 14597965 ~ 14605957 (+)
LOC103026417 LOC108428785 coding upstream 18482 14590603 ~ 14595936 (+)
LOC103025904 metap2,metap2b,LOC108428789,LOC108275287,LOC107569354,LOC107701059 coding upstream 51881 14556020 ~ 14562537 (+)
rccd1 NA coding upstream 63498 14546797 ~ 14550920 (+)
slc35b4 slc35b4,s35b4,LOC106561668 coding downstream 1147 14620471 ~ 14626071 (+)
LOC103027493 LOC108428780 coding downstream 7888 14627212 ~ 14637073 (+)
dus2 dus2,LOC105922392,LOC108229071 coding downstream 125944 14745268 ~ 14754530 (+)
LOC103030248 NA coding downstream 137999 14757323 ~ 14775204 (+)
amfr amfr,LOC107566269,LOC107679970,LOC107752457,LOC107723982,LOC107659867,LOC107555700 coding downstream 157387 14776711 ~ 14786908 (+)
G73514 dynlrb2,LOC103025073,LOC106573385 non-coding upstream 68905 14542198 ~ 14545513 (+)
G73468 NA non-coding upstream 289795 14323965 ~ 14324623 (+)
G73464 NA non-coding upstream 344694 14266776 ~ 14269724 (+)
G73443 NA non-coding upstream 448762 14164794 ~ 14165656 (+)
G73414 NA non-coding upstream 450078 14163344 ~ 14164340 (+)
G73527 NA non-coding downstream 18623 14637947 ~ 14638553 (+)
G73532 NA non-coding downstream 27119 14646443 ~ 14647562 (+)
G73566 NA non-coding downstream 56549 14675873 ~ 14676794 (+)
G73598 NA non-coding downstream 225121 14844445 ~ 14844664 (+)
G73710 NA non-coding downstream 504548 15123872 ~ 15126987 (+)
LOC103043719 NA other upstream 1716487 12871484 ~ 12897931 (+)
LOC103022150 brsk2a,brsk2b,LOC107707552,LOC107675281,LOC107600443 other upstream 3987454 10272919 ~ 10626964 (+)
G72621 NA other upstream 4532278 10078579 ~ 10082140 (+)
LOC103043718 LOC103043718,LOC108442465 other upstream 4644376 9968506 ~ 9970042 (+)
G72281 LOC107754548,LOC108274935,LOC107754545,LOC107754498 other upstream 5464999 9142899 ~ 9149419 (+)
G73533 NA other downstream 29505 14648829 ~ 14649551 (+)
rpgrip1l rpgrip1l other downstream 272210 14891534 ~ 14921003 (+)
svip svip other downstream 952978 15572302 ~ 15577533 (+)
G74169 NA other downstream 1667352 16286676 ~ 16288329 (+)
G74649 NA other downstream 3835527 18454851 ~ 18455197 (+)

Expression


Co-expression Network