LOC103025073 (dynlrb2,LOC103025073,LOC106573385)


Basic Information

Item Value
gene id LOC103025073
gene name dynlrb2,LOC103025073,LOC106573385
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 14542196 ~ 14545536 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU99163
TTCCGTCTCCACATAGCAACGGAAAGCACATCAGAGAAACAGCAACGGAGGAAACAGAGCGGAGGAGCTATGGCTGAAGTAGAAGACACACTGAAGAGAATCCAGACCCACAAAGGGGTCATAGGGACAATAGTAGTAAATGCTGAAGGTATTCCCATTAGAACAACCCTGGACAATTCCACCACAGTACAGTACGCTGGACTGCTTCATCAGCTTACTATGAAAGCCAGGAGCACAGTCAGGGACATAGACCCTCAGAATGACTTGACATTCCTACGCATCAGATCCAAGAAGCATGAGATCATGGTTGCACCTGATAAAGAATACCTACTGATCGTCATTCAGAACCCGAGTGAATAGTATTCTGGGACtgtaccagctttgcacattccATACACATCTTACATTTGTCATCTGTCTTTTGAGTTGCCTTTTTTCCATGTCTTTTGCCTCTTGAATTGAACTGTCACGTTCCTGTCAGTCACACACTTGTATTTGCCTTATGTTTTCCtatagaaaatgcattttaatttaataaatc
>XM_007228165.2
ttGGTCATTTTCCGATTATAATGGTGGATTTAAAAAGTGGGCAGTCTCTCCATAAACCAGCTGTGGTAAATCTTTCTACACTACTACTGGCTTCACACTTCCGTCTCCACATAGCAACGGAAAGCACATCAGAGAAACAGCAACGGAGGAAACAGAGCGGAGGAGCTATGGCTGAAGTAGAAGACACACTGAAGAGAATCCAGACCCACAAAGGGGTCATAGGGACAATAGTAGTAAATGCTGAAGGTATTCCCATTAGAACAACCCTGGACAATTCCACCACAGTACAGTACGCTGGACTGCTTCATCAGCTTACTATGAAAGCCAGGAGCACAGTCAGGGACATAGACCCTCAGAATGACTTGACATTCCTACGCATCAGATCCAAGAAGCATGAGATCATGGTTGCACCTGATAAAGAATACCTACTGATCGTCATTCAGAACCCGAGTGAATAGTATTCTGGGACtgtaccagctttgcacattccATACACATCTTACATTTGTCATCTGTCTTTTGAGTTGCCTTTTTTCCATGTCTTTTGCCTCTTGAATTGAACTGTCACGTTCCTGTCAGTCACACACTTGTATTTGCCTTATGTTTTCCtatagaaaatgcattttaatttaataaatctcATGAGAATTAA

Function

symbol description
dynlrb2 Predicted to enable dynein intermediate chain binding activity. Predicted to be involved in microtubule-based movement. Predicted to be part of cytoplasmic dynein complex. Predicted to be active in centrosome and cytoplasm. Orthologous to human DYNLRB2 (dynein light chain roadblock-type 2).

NR:

description
dynein light chain roadblock-type 2

GO: NA

KEGG:

id description
K10419 DYNLRB, DNCL2; dynein light chain roadblock-type

RNA

RNA id representative length rna type GC content exon number start site end site
TU99163 False 541 TUCP 0.43 4 14542209 14545438
XM_007228165.2 True 652 mRNA 0.42 4 14542196 14545536

Neighbor

gene id symbol gene type direction distance location
LOC103024229 LOC108428793 coding downstream 81808 14390685 ~ 14460388 (-)
pamr1 pamr1,LOC102307280,LOC107570358 coding downstream 578170 13920173 ~ 13964026 (-)
slc1a2 slc1a2,slc1a2b,LOC107740049,LOC107570361 coding downstream 632593 13861550 ~ 13909603 (-)
LOC103022766 NA coding downstream 694054 13833553 ~ 13848142 (-)
rag2 rag2,LOC107581808,LOC107720771,LOC107673237,LOC107750738,LOC107670203 coding downstream 1592757 12944453 ~ 12949439 (-)
cib1 cib1,kip1 coding upstream 5336 14550872 ~ 14554955 (-)
LOC103040849 LOC108428736,LOC104940688,LOC108274568 coding upstream 21374 14566910 ~ 14574221 (-)
LOC103041151 NA coding upstream 29259 14574795 ~ 14578518 (-)
LOC103028140 golt1bb,LOC107551388,LOC107676462,LOC108428784,LOC107754325,LOC107701063 coding upstream 68855 14614391 ~ 14619388 (-)
gpr22 gpr22,gpr22b,LOC108428781,LOC107754326,LOC107676451,LOC107561157,LOC107701065 coding upstream 94465 14640001 ~ 14649251 (-)
G73509 NA non-coding downstream 74055 14467622 ~ 14468141 (-)
G73491 NA non-coding downstream 265090 14276679 ~ 14277106 (-)
G73434 NA non-coding downstream 470158 14070499 ~ 14072038 (-)
G73432 NA non-coding downstream 503828 14038069 ~ 14038368 (-)
G73429 NA non-coding downstream 535047 14006752 ~ 14007149 (-)
G73540 slc25a3,LOC107569351,LOC107732290 non-coding upstream 52415 14597951 ~ 14605960 (-)
G73606 NA non-coding upstream 130345 14675881 ~ 14676858 (-)
G73617 dus2,LOC107555686 non-coding upstream 199634 14745170 ~ 14748658 (-)
G73622 NA non-coding upstream 211363 14756899 ~ 14757248 (-)
G73605 NA non-coding upstream 251819 14797355 ~ 14800633 (-)
G73172 NA other downstream 1920840 12610834 ~ 12621356 (-)
fbxo31 fbxo31,LOC107675295,LOC107751272,LOC107742043,LOC107662464 other downstream 1977218 12548690 ~ 12564978 (-)
LOC111193053 tnni2a.2,LOC108428758,LOC108275295,LOC103035007,LOC107549280,LOC107595232 other downstream 2490707 12048626 ~ 12051489 (-)
LOC111193052 NA other downstream 2996950 11520887 ~ 11545246 (-)
LOC111193093 NA other downstream 3316242 11224779 ~ 11225954 (-)
hbp1 hbp1,LOC107732286,LOC107701066 other upstream 163522 14709058 ~ 14797283 (-)
LOC103037068 cpne8,LOC108274474,LOC107679956,LOC107752477,LOC107723993,LOC105026415,LOC106561599,LOC105028206 other upstream 578278 15123814 ~ 15214284 (-)
LOC103040324 NA other upstream 835793 15381329 ~ 15414613 (-)
LOC103046265 pkp3 other upstream 1212767 15758303 ~ 15780678 (-)
LOC103041134 rps27l,zgc:136826,LOC107752326,LOC107598918,LOC101156845 other upstream 1921553 16467089 ~ 16470323 (-)

Expression


Co-expression Network