G73540 (slc25a3,LOC107569351,LOC107732290)


Basic Information

Item Value
gene id G73540
gene name slc25a3,LOC107569351,LOC107732290
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 14597951 ~ 14605960 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU99167
ACATtgacagttgaattgctttaTTTCATCCCCTTTAGTCAACAAATATCCAGACAATGCACATTTGTGCTCTGAGTGTGGAGTGTGATGTTCATAATACTACAGACACTGACCATCAGGGTCCCTTGCATTAATCGCTAAATAAATTCTCTATAATCAGGACATAAATGTGCAAAATGACATCTAGACAGGAAAGAAAAGGACAGCTTCACATATTTCCACATGATCTTTTAATCATTCTATTGACAAACATACTTAAAACCAGGTGGCATTCATTCACGTCATAGTTTAACTGAACTTCCACTGGAAGCTCCTCTCACCACACAGATGGAAGAGACGAGCAGCAGCCAGGTGAGCAACAGGGCAGCCGTGAGAgtttaaatatagaaaacagGAGGGAAGTTTGCTATTAAGGGATGGGAGGGGTGAGCAGAGATGATCTCTACTCGCTGAGACCCAGCTTCTTCTTCAGAGACTCTGGCATCTCGGGGGGAGGGGGACGGGGCAGGCGGAAGTAGACCTTGACAGAATCGTAGATGAACCACTGCAGGGCAGTCAGAGTACCAATCATGATGATACGGGCAACCAGACCCTTCCACACACATGGGTCCAAGCCTCTTGAGTACTTGAGCTGCTGTGCTTCCCTTCTCCTTGTTCAGCAATGTAACCAGCTACAAAGGTGACCAAAAGCTGTTCAGGCTTGCTGCACTCACTGCGGGGTTTGGGCACCACATACTTGTATAGCAATTCAACTGTGCGCTCGAAACAGGCAAACTTCATCATAGTGTAAGGGATCTGCCTCATCCACAGAGGGACAACACCCTTGTAGAATGCCCAGAGACCCTCCTCCGCATACATCTTGGGGGCACACTCCCTCAGGGTGTTGGCATAACCTGGCTGGGTCTGGATGCGCACTTTACACGCCTCCATAGGGGCCAGAGCTATATCAGCAAAGAACTCAGCACTTGCAGATGCTGCCAGGTACAGAGAGGTTCTCCACATGTAGGTATTCCTCTCCAAGCATATCACTGTACAATATCTTGAACACCTCATAGAATCCGAACTTGCAGAGACCCTGCATGGAGTAGCCGATGAAAGTGGGTGCCCAACCTTTAGCCAGGCCTCGCACACCATCCTCTTTGATTGTGACTGAGAATCCAGTAAAGATGCTCTTGTACTTAGCTGGGTCCACCTGCAGTCGACACTTGACCAAGTCCAGGGGCACTACAGCTGTGTGAGTGATACCGCAGCTCAGGATGCCCCCAAAGCCACAGAGGGCGTAGTATTTCATAGAGCCAAACTCACAGCTATCACCTGTCGGCTGTAGAAGCTGCAGCGAGTCTGCGGCTCTGTGCTTTAGTGGAGACGGTCTGTGAGGGCTCCTCCACTTTCTGCAGGGTGAAGAGGGGGGCGCTGAAGGGGTTCGCCCGGGCGAGCTGCGTTAATGTGGTGGGATACATATTGAAGGTAGTTGTTAAGGTCGACTCAAAATGGCGCCTCTGTCCTCCGCAGCCGGCCGCTCGTAGAGACCGAGGAGAGCTCTGCGCTCACTAATGTCGGAGGAAGGAGACCGCAACGTCAACGGAACAGCT
>TU99170
ACATtgacagttgaattgctttaTTTCATCCCCTTTAGTCAACAAATATCCAGACAATGCACATTTGTGCTCTGAGTGTGGAGTGTGATGTTCATAATACTACAGACACTGACCATCAGGGTCCCTTGCATTAATCGCTAAATAAATTCTCTATAATCAGGACATAAATGTGCAAAATGACATCTAGACAGGAAAGAAAAGGACAGCTTCACATATTTCCACATGATCTTTTAATCATTCTATTGACAAACATACTTAAAACCAGGTGGCATTCATTCACGTCATAGTTTAACTGAACTTCCACTGGAAGCTCCTCTCACCACACAGATGGAAGAGACGAGCAGCAGCCAGGTGAGCAACAGGGCAGCCGTGAGAgtttaaatatagaaaacagGAGGGAAGTTTGCTATTAAGGGATGGGAGGGGTGAGCAGAGATGATCTCTACTCGCTGAGACCCAGCTTCTTCTTCAGAGACTCTGGCATCTCGGGGGGAGGGGGACGGGGCAGGCGGAAGTAGACCTTGACAGAATCGTAGATGAACCACTGCAGGGCAGTCAGAGTACCAATCATGATGATACGGGCAACCAGACCCTTCCACACCCATGGGTCCAAGCCTCTTGAGTACTTGAGCTGCTGTGCTTCCCTTCTCCTTGTTCAGCAATGTAACCAGCTACAAAGGTGACCAAAAGCTGTTCAGGCTTGCTGCACTCACTGCGGGGTTTGGGCACCACATACTTGTATAGCAATTCAACTGTGCGCTCGAAACAGGCAAACTTCATCATAGTGTAAGGGATCTGCCTCATCCACAGAGGGACAACACCCTTGTAGAATGCCCAGAGACCCTCCTCCGCATACATCTTGGGGGCACACTCCCTCAGGGTGTTGGCATAACCTGGCTGGGTCTGGATGCGCACTTTACACGCCTCCATAGGGGCCAGAGCTATATCAGCAAAGAACTCAGCACTTGCAGATGCTGCCAGGTACAGAGAGGTTCTCCACATGTAGGTATTTTCTCTCCAAGCATATCACTGTACAATATCTTGAACACCTCATAGAATCCGAACTTGCAGAGACCCTGCATGGAGTAGCCGATGAAAGTGGGTGCCCAACCTTTAGCCAGGCCTCGCACACCATCCTCTTTGATTGTGACTGAGAATCCAGTAAAGATGCTCTTGTACTTAGCTGGGTCACCTGCAGTCGACACTTGACCAAGTCCAGGGGCACTACAGCTGTGTGAGTGATACCGCAGCTCAGGATGCCCCCAAAGCCACAGAGGGCGTAGTATTTCATAGAGCCAAACTCACAGCTATCACCTGTCGGCTGTAGAAGCTGCAGCGAGTCTGCGGCTCTGTGCTTTAGTGGAGACGGTCTGTGAGGGCTCCTCCACTTTCTGCAGGGTGAAGAGGGGGGCGCTGAAGGGGTTCGCCCGGGCGAGCTGCGTTAATGTGGTGGGATACATATTGAAGGTAGCTGAgaggaagggaaaaaaaaaaaagacagtccGGATTAATTCTGTTTAGAAAAATCGAATTAAAAGGAGAGACAGGCAGTTTCCTGTTAATACCTGTTAGCTAGCAAACGTTACAGGTCAGTCACATTGGATAATAAGCTAGTGTTAGCTAACCAGATAACTAACGCTAGTTTTTTCAATATCAGGTTTAAAACATAGCTA

Function

symbol description
slc25a3 Predicted to enable inorganic phosphate transmembrane transporter activity. Predicted to be involved in phosphate ion transmembrane transport. Located in mitochondrion.

NR:

description
phosphate carrier protein, mitochondrial isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU99167 False 1592 lncRNA 0.50 8 14597951 14605960
TU99170 True 1673 lncRNA 0.48 7 14598454 14605960

Neighbor

gene id symbol gene type direction distance location
LOC103041151 NA coding downstream 19433 14574795 ~ 14578518 (-)
LOC103040849 LOC108428736,LOC104940688,LOC108274568 coding downstream 23730 14566910 ~ 14574221 (-)
cib1 cib1,kip1 coding downstream 42996 14550872 ~ 14554955 (-)
LOC103024229 LOC108428793 coding downstream 137563 14390685 ~ 14460388 (-)
pamr1 pamr1,LOC102307280,LOC107570358 coding downstream 633925 13920173 ~ 13964026 (-)
LOC103028140 golt1bb,LOC107551388,LOC107676462,LOC108428784,LOC107754325,LOC107701063 coding upstream 8431 14614391 ~ 14619388 (-)
gpr22 gpr22,gpr22b,LOC108428781,LOC107754326,LOC107676451,LOC107561157,LOC107701065 coding upstream 34041 14640001 ~ 14649251 (-)
LOC111193055 NA coding upstream 81729 14687689 ~ 14690107 (-)
prkar2b prkar2b,LOC108275286,LOC107732287,LOC107551419,LOC107676465 coding upstream 112594 14718554 ~ 14733253 (-)
mphosph6 mphosph6 coding upstream 217258 14823218 ~ 14826889 (-)
G73509 NA non-coding downstream 129810 14467622 ~ 14468141 (-)
G73491 NA non-coding downstream 320845 14276679 ~ 14277106 (-)
G73434 NA non-coding downstream 525913 14070499 ~ 14072038 (-)
G73432 NA non-coding downstream 559583 14038069 ~ 14038368 (-)
G73429 NA non-coding downstream 590802 14006752 ~ 14007149 (-)
G73606 NA non-coding upstream 69921 14675881 ~ 14676858 (-)
G73617 dus2,LOC107555686 non-coding upstream 139210 14745170 ~ 14748658 (-)
G73622 NA non-coding upstream 150939 14756899 ~ 14757248 (-)
G73605 NA non-coding upstream 191395 14797355 ~ 14800633 (-)
G73639 NA non-coding upstream 198271 14804231 ~ 14805502 (-)
LOC103025073 dynlrb2,LOC103025073,LOC106573385 other downstream 52415 14542196 ~ 14545536 (-)
G73172 NA other downstream 1976595 12610834 ~ 12621356 (-)
fbxo31 fbxo31,LOC107675295,LOC107751272,LOC107742043,LOC107662464 other downstream 2032973 12548690 ~ 12564978 (-)
LOC111193053 tnni2a.2,LOC108428758,LOC108275295,LOC103035007,LOC107549280,LOC107595232 other downstream 2546462 12048626 ~ 12051489 (-)
LOC111193052 NA other downstream 3052705 11520887 ~ 11545246 (-)
hbp1 hbp1,LOC107732286,LOC107701066 other upstream 103098 14709058 ~ 14797283 (-)
LOC103037068 cpne8,LOC108274474,LOC107679956,LOC107752477,LOC107723993,LOC105026415,LOC106561599,LOC105028206 other upstream 517854 15123814 ~ 15214284 (-)
LOC103040324 NA other upstream 775369 15381329 ~ 15414613 (-)
LOC103046265 pkp3 other upstream 1152343 15758303 ~ 15780678 (-)
LOC103041134 rps27l,zgc:136826,LOC107752326,LOC107598918,LOC101156845 other upstream 1861129 16467089 ~ 16470323 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
bowfin (Amia calva) G38505 NA non-coding CM030125.1 CM030125.1 2414521 ~ 2431408 (+)
tiger barb (Puntius tetrazona) G32579 NA non-coding NC_056703.1 CM032072.1 1759644 ~ 1759857 (-)