G73566


Basic Information

Item Value
gene id G73566
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 14675873 ~ 14676794 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU99198
cgtactgcctctcggctgtggttcagggtagctagtttccactgtagctccgtggccagaacaaggtgccggtaaactttcctttccacccgttctggggtaatagcacaaactgtttctttttagcgcccacttctaagtaaagttaacctcttaacacgcgctggcccaccggcgggccagaaatatttaatatttcataactggctgtgtttctgaatagttatgaacagttacaggttcaatatagacatccaatataccattttaaagcttagaatctctgcttttgagctatttagcctatttagcggaatatcctttcagaaaataaacatttagggcgaaatatgccttggttatgattttaataattcataactctcatatttgcatttatcgttcgtccatatttcatcgaatgcggtcatgtcatacaccattcgaaccgtctggctctccggattccagaactgtgcttttactgtaggatgtatgtttcatgaattagagctgcgtcagagcgcatgtttccagtaataaaaggctctccttttgtcctggggtaacctccggtcactgccgccaccccccgaacacacacccgcgctcagccacaggtcctaccttcaaaacgcgtccagactaaagagaatccatcaatccagtctcctgtaatccacagttatatccaaacagcgctggaaatcacttcatccagaaatgaaacttatccaatctttatctctgttttaaaaccgttttattcaccgaattcggcacaacacgctattatagtcagaagcctcgcggagtaatgcggtacttgctgtgcttcaacataatattatggtctgtcggagcgttgcggctaccgttgtcaggagcgtcgcggagtaatacgtacttgctgtgcttcaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU99198 True 922 lncRNA 0.44 1 14675873 14676794

Neighbor

gene id symbol gene type direction distance location
LOC103027493 LOC108428780 coding upstream 38800 14627212 ~ 14637073 (+)
slc35b4 slc35b4,s35b4,LOC106561668 coding upstream 49802 14620471 ~ 14626071 (+)
LOC103028647 ldhbb,LOC103028647,LOC108428782,LOC108275055,LOC105895664,LOC103366875,LOC106573069,LOC107744904,LOC107659842,LOC107589975,LOC107586539 coding upstream 61483 14607589 ~ 14614390 (+)
slc25a3 slc25a3,slc25a3b,LOC107732290 coding upstream 69916 14597965 ~ 14605957 (+)
LOC103026417 LOC108428785 coding upstream 79937 14590603 ~ 14595936 (+)
dus2 dus2,LOC105922392,LOC108229071 coding downstream 68474 14745268 ~ 14754530 (+)
LOC103030248 NA coding downstream 80529 14757323 ~ 14775204 (+)
amfr amfr,LOC107566269,LOC107679970,LOC107752457,LOC107723982,LOC107659867,LOC107555700 coding downstream 99917 14776711 ~ 14786908 (+)
LOC103031607 LOC108274970,LOC108428766 coding downstream 111973 14788767 ~ 14797233 (+)
LOC103031298 gpia,gpi,LOC108428767,LOC108274969,LOC107679975 coding downstream 124924 14801718 ~ 14812498 (+)
G73532 NA non-coding upstream 28311 14646443 ~ 14647562 (+)
G73527 NA non-coding upstream 37320 14637947 ~ 14638553 (+)
G73529 LOC107551388,LOC107676462,LOC108428784,LOC107701063,LOC107754325 non-coding upstream 56549 14614418 ~ 14619324 (+)
G73514 dynlrb2,LOC103025073,LOC106573385 non-coding upstream 130360 14542198 ~ 14545513 (+)
G73468 NA non-coding upstream 351250 14323965 ~ 14324623 (+)
G73598 NA non-coding downstream 167651 14844445 ~ 14844664 (+)
G73710 NA non-coding downstream 447078 15123872 ~ 15126987 (+)
LOC111193097 NA non-coding downstream 509455 15186249 ~ 15187955 (+)
G73715 NA non-coding downstream 512101 15188895 ~ 15189386 (+)
G73799 NA non-coding downstream 688849 15365643 ~ 15368383 (+)
G73533 NA other upstream 26322 14648829 ~ 14649551 (+)
LOC103043719 NA other upstream 1777942 12871484 ~ 12897931 (+)
LOC103022150 brsk2a,brsk2b,LOC107707552,LOC107675281,LOC107600443 other upstream 4048909 10272919 ~ 10626964 (+)
G72621 NA other upstream 4593733 10078579 ~ 10082140 (+)
LOC103043718 LOC103043718,LOC108442465 other upstream 4705831 9968506 ~ 9970042 (+)
rpgrip1l rpgrip1l other downstream 214740 14891534 ~ 14921003 (+)
svip svip other downstream 895508 15572302 ~ 15577533 (+)
G74169 NA other downstream 1609882 16286676 ~ 16288329 (+)
G74649 NA other downstream 3778057 18454851 ~ 18455197 (+)
LOC103029914 scamp5,scamp5a,LOC108436905,LOC103363822,LOC107395508,LOC107703195 other downstream 3793910 18470704 ~ 18479345 (+)

Expression


Co-expression Network