G73605


Basic Information

Item Value
gene id G73605
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 14797355 ~ 14800633 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU99250
AATTAAGGACAACTGTTTATTATTCTTGTCTTAGAATAAAACCCTTTTACACTGAGGTACATCCCCCATGCTGGGGCTGAGAATGAACATAGATGTTACTGTAGATGtacataaagaaagaaatgcaaagttaaatcaacactgaaaGAATCTGGTGACACTCAATTCACAGGGCATGTCAGTAACAGCATTTGCCATAAGCACTGCCATAAGTCATCACAATTCTGTTGATTCTGACAATCCCAGCatgctgcctgtgtgtgtgttacaggtccaAGCGTATATATGAAGAAAATGAATGTCTGCATGTATCTGTGTACCACACATTTCTAAATTAAACAGGTTGATCGTGGATCAGCAGGACCTGATTCTGCTTTCATATGCTTAGTAAAGTATTCAGATAGATGTTGTGTACCTGTGAGAAAGCTGGATTTTATATTAGCTCCAACAGAAATCAAAAGACATGCCCAACATGACTGAATATGTCAAAACTAAATGAACAATTGTATTGATTACAATGGTAAAGCTGAATCTCTTGAATTGTTTCATTACAACATTCTTACACTTGTGATAAAATCTTAAGTGGACATTCCACTATAACCATTACTTTTTCaggcagtgtgcaaaaaaaggtaaattagCATCTATTAATGAGAATGACATCTTAATGTTTTTAAGACGGAAGTCTTGATTATTCCATTATAAATGCTGCTCACATCCAGAAGAACTATGTAAGGTTAGCCATGCTTAACGTACATTAAAGCTGTTAAGGACTGAGAAACTGGATTAGAAGAAGTGTAACTAATCTTCCCCAAATCAAACCATATCCGGCTCTACAAGTAGCTACTTTCACTTTAATATGCTATTGGCCTTTTATAGCACCCAGGAATCTTATCAGTTGTTCAATGTTCAAACAGGACAATGACAAAATTATAGCTGTGCTGCGAAAGTCCAACTAGAAATGCACCAAACTGATCTGCAGTTAGTGGGAAGTGAGAAAATGAGGAGAACCTAATTATCTGGCAAGGTTGCATCTCACTTAAATGACAATTAATCCACAAAACAAATCTACTAAACaacatttaagtatttttgtCTCGCATTTCCACACAGAAGTTCAACAATCGGTTCTGTGGTTGACCTCTTTAGACCCAATAACAACATAACAATAACAAATTATATAAAAGGACTGAACAGAcaacaaaaattacattttccccTCAATAAGAAATGGCCTGAGAATACATCACACAAAATCACATTTCTAGCCAGTGAAAGTTAAATCAAACAAGAATGTGACATAGGAGCACAAAATCAAATTTGAATGAATCAAATGGTCAAAATTAGTGAGCacaataaaggcttttttatatataaattctaaAACCTGTGGGCTGTATCTTCTACATGTCAGTGGGACTGCAAAATTAGTAGAGTGTTTTACGTTTCGTAAAAGCATCTGGTCACTTCATGCATTatgagtatcaggattatatctgaaAGAGGCTAATCCACATGAAAAcgcaagtgtaaacacacaaaaagacaaaaaggtaCAAATCCAGTTACACAAACCACCTCAGAagtggtctgagatgcatttgGGCCAAATGttagagcagtgtaaatgcttTAGTATCTCAAACACTCATTCAACAACTGAAACAAACCTTAGCTGTGCAATGAGTGAATTTGAATGTTCTGCCCCACAAAGCAGTCAGACTAACAGAAGTCGACaactaaatgtaaatgatttggCCAAATTCTAATCTCTAATCAAAATATAATCCAGATACTAGTCTCACGAAATGATCCGGTGTGAGCAGAGTCTTAGCATCTGtagaattatttaaatgtcaaaatcaAGTGAGCATCATACTGAACACTATCTTCCTGTCAAGAGGTTTTATCTCCAAGACTGGGCcctggttatttgtgtttcacaTAGAGCTTTTAATAAGCCCAATTCATTTACTTGTGTGTCAGCATTATAGTAAATAAGATAAGAGTACTGCACAAATCTCTACTTTAacttaaaccatatttttacaATTCTTTACGCAATTATTTTCAGCAGCTGAAATTCACTCTAAATACAAGATTAGTTTATGAAAGGTCTTTAAATGTGCTTATATATGATTGAGTGTACAAGTGTAGTGTTTGCTCTGGGTGTAGTGGGTTTAGAGTGAGTGTGTTTTATTGGGTTGTCTTGCCACAAGCTTTAAGCAACACAAGCTTGAGTTAAAGGGTGTAGATTAAGGTTAAACATGGCAGACACTTTAGTGCAAATTATCATCAATACATTTGCAGTGATTGCCATTTATGACATCATTTTATCTGTGTCTgtattacaatttaaaatgttaagtcTTCTATTACCAAGTCAGAGTGATCGTAAGCAGAACTAATCTGCAACTCAAAAAACCATAAAGTGTTTAATAAGCAGAGCTTCTGATAAGCAGGGACAATAGGGACTTCAGATGCAGTATATGACATCACACACAGTGAAACATCCAATTGGGGTTGGAGCTCCTAGTGGGACTAGGAACAGATTGCACATAATGCacaccaactacaggtgtagaCAAAAAACGTACAACGTGTAAATACACTCCCAACAGTTTTAAGTCACTAGTCAAACACTATGATATCCAGTTATAATTTCAACAGGTGAGCATGCTAGTGAAACTTGAATCCGCAGGATGCATTAGCTCTACATTTGGTGActgatattataaaatatacagcgGCACCTCCCAGCTCCACACAGCTATACAACAGGCAATGCAAAATTAGTTCATGACTAAATATCATAACTAAAGTAAACAGCTTTCTGCAGTGGAGGATAGCACAAATACAGCCTCACTATACATTACATTCACCTACTCACTACACTGGCAGCTAGTGTAGCTTCTGTGCCGATCGATACACAGACCACTGTAACACTTTATTACAACAGCAGATTAACGCATCAGCAGCAAATACTCTGGTAAGTTATATGCAATATAGCGCCACTAGTGGCCAATTTTATCAGGACATTTAAAGCCCACAGCTAGTCAAACATGACCAGTAGTTATGGTTTGCAGATATTGACACCACCGTAAAAGTCAGAAGATAACTGTAGCATATCCAGATCATATAGACTGGTAGTCATATTCGCTTGACTATATTGCCAGGTACCAGTTTTTGTATCTGTTGCTGTCccaagtgcatttaaaaaatctgaacaGGCAAATACTTACAAAACGTACCTAAACCATGccaagagtgaacacaaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU99250 True 3279 lncRNA 0.36 1 14797355 14800633

Neighbor

gene id symbol gene type direction distance location
prkar2b prkar2b,LOC108275286,LOC107732287,LOC107551419,LOC107676465 coding downstream 64102 14718554 ~ 14733253 (-)
LOC111193055 NA coding downstream 107248 14687689 ~ 14690107 (-)
gpr22 gpr22,gpr22b,LOC108428781,LOC107754326,LOC107676451,LOC107561157,LOC107701065 coding downstream 148104 14640001 ~ 14649251 (-)
LOC103028140 golt1bb,LOC107551388,LOC107676462,LOC108428784,LOC107754325,LOC107701063 coding downstream 177967 14614391 ~ 14619388 (-)
LOC103041151 NA coding downstream 218837 14574795 ~ 14578518 (-)
mphosph6 mphosph6 coding upstream 22585 14823218 ~ 14826889 (-)
snx20 snx20 coding upstream 26771 14827404 ~ 14831477 (-)
LOC103033621 NA coding upstream 48949 14849582 ~ 14857596 (-)
rbl2 rbl2 coding upstream 68299 14868932 ~ 14889755 (-)
irx3 LOC103035229,LOC108428748 coding upstream 163865 14964498 ~ 14967301 (-)
G73622 NA non-coding downstream 40107 14756899 ~ 14757248 (-)
G73617 dus2,LOC107555686 non-coding downstream 48697 14745170 ~ 14748658 (-)
G73606 NA non-coding downstream 120497 14675881 ~ 14676858 (-)
G73540 slc25a3,LOC107569351,LOC107732290 non-coding downstream 191395 14597951 ~ 14605960 (-)
G73509 NA non-coding downstream 329214 14467622 ~ 14468141 (-)
G73639 NA non-coding upstream 3598 14804231 ~ 14805502 (-)
G73642 NA non-coding upstream 17869 14818502 ~ 14818812 (-)
G73643 LOC108428768 non-coding upstream 18843 14819476 ~ 14819763 (-)
G73644 NA non-coding upstream 19597 14820230 ~ 14820476 (-)
G73671 NA non-coding upstream 90839 14891472 ~ 14893864 (-)
hbp1 hbp1,LOC107732286,LOC107701066 other downstream 72 14709058 ~ 14797283 (-)
LOC103025073 dynlrb2,LOC103025073,LOC106573385 other downstream 251819 14542196 ~ 14545536 (-)
G73172 NA other downstream 2175999 12610834 ~ 12621356 (-)
fbxo31 fbxo31,LOC107675295,LOC107751272,LOC107742043,LOC107662464 other downstream 2232377 12548690 ~ 12564978 (-)
LOC111193053 tnni2a.2,LOC108428758,LOC108275295,LOC103035007,LOC107549280,LOC107595232 other downstream 2745866 12048626 ~ 12051489 (-)
LOC103037068 cpne8,LOC108274474,LOC107679956,LOC107752477,LOC107723993,LOC105026415,LOC106561599,LOC105028206 other upstream 323181 15123814 ~ 15214284 (-)
LOC103040324 NA other upstream 580696 15381329 ~ 15414613 (-)
LOC103046265 pkp3 other upstream 957670 15758303 ~ 15780678 (-)
LOC103041134 rps27l,zgc:136826,LOC107752326,LOC107598918,LOC101156845 other upstream 1666456 16467089 ~ 16470323 (-)
nrg4 NA other upstream 3076393 17877026 ~ 17885395 (-)

Expression


Co-expression Network