G73606


Basic Information

Item Value
gene id G73606
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 14675881 ~ 14676858 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU99251
ccgtattactccgcgacgctcctgacaacggtagccgcaacgctccgacagaccataatattatgttgaagcacagcaagtacgtattactccgcgacgctcctgacaacggtagccgcaacgctccgacagaccataatattatgttgaagcacagcaagtaccgcattactccgcgaggcttctgactataatagcgtgttgtgccgaattcggtgaataaaacggttttaaaacagagataaagattggataagtttcatttctggatgaagtgatttccagcgctgtttggatataactgtggattacaggagactggattgatggattctctttagtctggacgcgttttgaaggtaggacctgtggctgagcgcgggtgtgtgttcggggggtggcggcagtgaccggaggttaccccaggacaaaaggagagccttttattactggaaacatgcgctctgacgcagctctaattcatgaaacatacatcctacagtaaaagcacagttctggaatccggagagccagacggttcgaatggtgtatgacatgaccgcattcgatgaaatatggacgaacgataaatgcaaatatgagagttatgaattattaaaatcataaccaaggcatatttcgccctaaatgtttattttctgaaaggatattccgctaaataggctaaatagctcaaaagcagagattctaagctttaaaatggtatattggatgtctatattgaacctgtaactgttcataactattcagaaacacagccagttatgaaatattaaatatttctggcccgccggtgggccagcgcgtgttaagaggttaactttacttagaagtgggcgctaaaaagaaacagtttgtgctattaccccagaacgggtggaaaggaaagtttaccggcaccttgttctggccacggagctacagtggaaactagctaccctgaaccacagccgagag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU99251 True 978 lncRNA 0.45 1 14675881 14676858

Neighbor

gene id symbol gene type direction distance location
gpr22 gpr22,gpr22b,LOC108428781,LOC107754326,LOC107676451,LOC107561157,LOC107701065 coding downstream 26630 14640001 ~ 14649251 (-)
LOC103028140 golt1bb,LOC107551388,LOC107676462,LOC108428784,LOC107754325,LOC107701063 coding downstream 56493 14614391 ~ 14619388 (-)
LOC103041151 NA coding downstream 97363 14574795 ~ 14578518 (-)
LOC103040849 LOC108428736,LOC104940688,LOC108274568 coding downstream 101660 14566910 ~ 14574221 (-)
cib1 cib1,kip1 coding downstream 120926 14550872 ~ 14554955 (-)
LOC111193055 NA coding upstream 10831 14687689 ~ 14690107 (-)
prkar2b prkar2b,LOC108275286,LOC107732287,LOC107551419,LOC107676465 coding upstream 41696 14718554 ~ 14733253 (-)
mphosph6 mphosph6 coding upstream 146360 14823218 ~ 14826889 (-)
snx20 snx20 coding upstream 150546 14827404 ~ 14831477 (-)
LOC103033621 NA coding upstream 172724 14849582 ~ 14857596 (-)
G73540 slc25a3,LOC107569351,LOC107732290 non-coding downstream 69921 14597951 ~ 14605960 (-)
G73509 NA non-coding downstream 207740 14467622 ~ 14468141 (-)
G73491 NA non-coding downstream 398775 14276679 ~ 14277106 (-)
G73434 NA non-coding downstream 603843 14070499 ~ 14072038 (-)
G73432 NA non-coding downstream 637513 14038069 ~ 14038368 (-)
G73617 dus2,LOC107555686 non-coding upstream 68312 14745170 ~ 14748658 (-)
G73622 NA non-coding upstream 80041 14756899 ~ 14757248 (-)
G73605 NA non-coding upstream 120497 14797355 ~ 14800633 (-)
G73639 NA non-coding upstream 127373 14804231 ~ 14805502 (-)
G73642 NA non-coding upstream 141644 14818502 ~ 14818812 (-)
LOC103025073 dynlrb2,LOC103025073,LOC106573385 other downstream 130345 14542196 ~ 14545536 (-)
G73172 NA other downstream 2054525 12610834 ~ 12621356 (-)
fbxo31 fbxo31,LOC107675295,LOC107751272,LOC107742043,LOC107662464 other downstream 2110903 12548690 ~ 12564978 (-)
LOC111193053 tnni2a.2,LOC108428758,LOC108275295,LOC103035007,LOC107549280,LOC107595232 other downstream 2624392 12048626 ~ 12051489 (-)
LOC111193052 NA other downstream 3130635 11520887 ~ 11545246 (-)
hbp1 hbp1,LOC107732286,LOC107701066 other upstream 32200 14709058 ~ 14797283 (-)
LOC103037068 cpne8,LOC108274474,LOC107679956,LOC107752477,LOC107723993,LOC105026415,LOC106561599,LOC105028206 other upstream 446956 15123814 ~ 15214284 (-)
LOC103040324 NA other upstream 704471 15381329 ~ 15414613 (-)
LOC103046265 pkp3 other upstream 1081445 15758303 ~ 15780678 (-)
LOC103041134 rps27l,zgc:136826,LOC107752326,LOC107598918,LOC101156845 other upstream 1790231 16467089 ~ 16470323 (-)

Expression


Co-expression Network