G73617 (dus2,LOC107555686)


Basic Information

Item Value
gene id G73617
gene name dus2,LOC107555686
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 14745170 ~ 14748658 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU99266
TTTTCAGCTACCGCTTGAATGTAGTCACAGTGAACAGggtgtctctgtctctcatctTTCATCCTGCCATGGACAGCTATTGCTGCCACccctgttttttcaattctcTTCACCAAACTCACAGTCTCTTCCAGAGTGGGAAGAATTCGGATTTTACAGGTTACAGGCTTTGAAACTCCTCTCACAAGAGTGGTAAGAATAGTCTCAATTTTTTCAGGATCAGAGAGGAGAGCAGATCCCATTCCGCCCTTGGTGGAGTACTCTTTTGGACAGCCCATATTGACATCAATAGCTGCCACATCATTCTCAACAAGTTGGGCCACTGCCAGGGCTCTATCTGGATCTGCAGTCCCCATCTGAAAGACGACCCTGTCCTTTTCTTTACTGCAGGTTCGAAACATCACCCTCTCATCTGGAGCAATGAAATCCACCGTGTCCAAAACATCATTCACTACCCTTTCACACTGAGCCATTTTGATGTCAATTAGTTCCTCACAGTAGACAATATCTGCACCATAGTCCAGTGCCAAGAGCCTCATAGGTAGAGTGCCCACCCGCACCATTGGGGCTAGAATGATCTTATTGTTGAAACTCAGCTTTCCCAAAGCGTTGGCCATGGTGTTGCCTTGTTTACCCCGGCATCAAAACACTTCTCTGTACGGCTGCAGTGAACACGCGTGTTTAACTCCAGGTTCCTAGTTGTCGTCACCAATAAGCGACAGAGCTCGTTTGGGGTTGTTCCTTTCGCACACTGCACACTAGCTAGGTTACATACTCCACGAAGTGCACTCGAACTCCGAATCTCCCGATTAGGGACCATTTGAGACAGAGCCGGGTGTTCATTAAACAGAGCCGTCACTACAGATATATAAACAGGGGGCTAAGCTTTAACTAGGGGGG

Function

symbol description
dus2 Predicted to enable tRNA dihydrouridine synthase activity. Predicted to be involved in tRNA dihydrouridine synthesis. Predicted to act upstream of or within tRNA processing. Predicted to be active in cytoplasm. Orthologous to human DUS2 (dihydrouridine synthase 2).

NR:

description
PREDICTED: tRNA-dihydrouridine(20) synthase [NAD(P)+]-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU99266 True 900 lncRNA 0.48 10 14745170 14748658

Neighbor

gene id symbol gene type direction distance location
prkar2b prkar2b,LOC108275286,LOC107732287,LOC107551419,LOC107676465 coding downstream 11917 14718554 ~ 14733253 (-)
LOC111193055 NA coding downstream 55063 14687689 ~ 14690107 (-)
gpr22 gpr22,gpr22b,LOC108428781,LOC107754326,LOC107676451,LOC107561157,LOC107701065 coding downstream 95919 14640001 ~ 14649251 (-)
LOC103028140 golt1bb,LOC107551388,LOC107676462,LOC108428784,LOC107754325,LOC107701063 coding downstream 125782 14614391 ~ 14619388 (-)
LOC103041151 NA coding downstream 166652 14574795 ~ 14578518 (-)
mphosph6 mphosph6 coding upstream 74560 14823218 ~ 14826889 (-)
snx20 snx20 coding upstream 78746 14827404 ~ 14831477 (-)
LOC103033621 NA coding upstream 100924 14849582 ~ 14857596 (-)
rbl2 rbl2 coding upstream 120274 14868932 ~ 14889755 (-)
irx3 LOC103035229,LOC108428748 coding upstream 215840 14964498 ~ 14967301 (-)
G73606 NA non-coding downstream 68312 14675881 ~ 14676858 (-)
G73540 slc25a3,LOC107569351,LOC107732290 non-coding downstream 139210 14597951 ~ 14605960 (-)
G73509 NA non-coding downstream 277029 14467622 ~ 14468141 (-)
G73491 NA non-coding downstream 468064 14276679 ~ 14277106 (-)
G73434 NA non-coding downstream 673132 14070499 ~ 14072038 (-)
G73622 NA non-coding upstream 8241 14756899 ~ 14757248 (-)
G73605 NA non-coding upstream 48697 14797355 ~ 14800633 (-)
G73639 NA non-coding upstream 55573 14804231 ~ 14805502 (-)
G73642 NA non-coding upstream 69844 14818502 ~ 14818812 (-)
G73643 LOC108428768 non-coding upstream 70818 14819476 ~ 14819763 (-)
LOC103025073 dynlrb2,LOC103025073,LOC106573385 other downstream 199634 14542196 ~ 14545536 (-)
G73172 NA other downstream 2123814 12610834 ~ 12621356 (-)
fbxo31 fbxo31,LOC107675295,LOC107751272,LOC107742043,LOC107662464 other downstream 2180192 12548690 ~ 12564978 (-)
LOC111193053 tnni2a.2,LOC108428758,LOC108275295,LOC103035007,LOC107549280,LOC107595232 other downstream 2693681 12048626 ~ 12051489 (-)
LOC111193052 NA other downstream 3199924 11520887 ~ 11545246 (-)
LOC103037068 cpne8,LOC108274474,LOC107679956,LOC107752477,LOC107723993,LOC105026415,LOC106561599,LOC105028206 other upstream 375156 15123814 ~ 15214284 (-)
LOC103040324 NA other upstream 632671 15381329 ~ 15414613 (-)
LOC103046265 pkp3 other upstream 1009645 15758303 ~ 15780678 (-)
LOC103041134 rps27l,zgc:136826,LOC107752326,LOC107598918,LOC101156845 other upstream 1718431 16467089 ~ 16470323 (-)
nrg4 NA other upstream 3128368 17877026 ~ 17885395 (-)

Expression


Co-expression Network