G73817


Basic Information

Item Value
gene id G73817
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 15428748 ~ 15429645 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU99549
gaGATAAGCCAGCGCTAAGCCGGAGGATCATAGAATCAATaagacagaagaaaatacaTCTAGACTAGTACTTTAGCAAGCAGCATTTTATACAACATTTGATTCGGACATCATTCAGCAACTCCCTACCTTCAACTACTGCCTAAGACACAGAGAcagtattagaaaaaaacattttggacaATGCAGCATGCATGTATATGTAGCACCAACACTTCAGTGTTAGTACAACACAGGTTGGtcattaatattttgtgtactaaCCTGTCAGATCCCACTATGAAGATTATCATTTAGTTTAAACCTACGGTAATACTCCTGGTGTGTATTATACGACTGGCACACAGCCTTAATTACCAAGTCTGAGCAGCTAATATGCCAACACACTTTGACTTAATCTGGCTGTTAAATTACAGACAGAATGATGAGGACACACTGCATATCCTACTACAGAGCGTGTGAGTTTCCCACGTCTACCAAAATCAACACATCAGTTTGGCTTGGCCACTTCTCGCTCCCGTAGATTCAAATTTGAAAGGCATGCAAGAGGCACCTTTGATGCTGAAAGCAATGAACCCAaacttatttcttttctttttttttttgtttccgcTGAACAACCCGAAACTGGATCCAGATGGACGTACTCAAGCCGCCTGCTGAATAGGAGCCAGATCTGCTAACATTAGGCAGTTAGCAAATTCACTCTCCTCCTGCTTCCAAGCTTCCAGACTCAACCTCGGAGGATAGATTAACAGGAAAGGCTGCGTTCTTCCCCTGAGGGAATATGAGTAGGCATATGcacgttattattattgtgcttAGTGGCTGAAATGATACTACAGCCTCAAACGCTCAAATGTTCCAGTGAACACTTAAAAGATAATTTAACTCTTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU99549 True 898 lncRNA 0.41 1 15428748 15429645

Neighbor

gene id symbol gene type direction distance location
LOC103040017 LOC103040017,LOC108442681,LOC108274534,LOC105913127,LOC107695923,LOC107555711,LOC107723960,LOC107701590 coding upstream 10201 15403842 ~ 15418547 (+)
LOC103041261 clpx,LOC108442679 coding upstream 48204 15362768 ~ 15380544 (+)
LOC111193056 rsph3,LOC107580271 coding upstream 70854 15355735 ~ 15357894 (+)
lrrk2 lrrk2 coding upstream 77404 15308529 ~ 15351344 (+)
irx5 LOC108428750 coding upstream 347725 15075459 ~ 15081023 (+)
slc5a12 slc5a12 coding downstream 6754 15436399 ~ 15449870 (+)
fancf NA coding downstream 195183 15624828 ~ 15627708 (+)
LOC103044315 ano9,LOC108442698 coding downstream 287420 15717065 ~ 15738062 (+)
sigirr sigirr coding downstream 309917 15739562 ~ 15755106 (+)
LOC103046771 LOC103046771,LOC108442701 coding downstream 356308 15785953 ~ 15798451 (+)
G73801 NA non-coding upstream 43624 15384855 ~ 15385124 (+)
G73800 NA non-coding upstream 44511 15384023 ~ 15384237 (+)
G73798 spi1a,LOC108442687,LOC108275191,LOC107555713 non-coding upstream 45165 15382078 ~ 15383583 (+)
G73799 NA non-coding upstream 60365 15365643 ~ 15368383 (+)
G73715 NA non-coding upstream 239362 15188895 ~ 15189386 (+)
G73819 NA non-coding downstream 25290 15454935 ~ 15457857 (+)
G73832 NA non-coding downstream 141624 15571269 ~ 15629178 (+)
G73891 NA non-coding downstream 236703 15666348 ~ 15669769 (+)
G73941 pkp3,LOC107589311 non-coding downstream 334895 15764540 ~ 15765125 (+)
G73970 NA non-coding downstream 466074 15895719 ~ 15896522 (+)
rpgrip1l rpgrip1l other upstream 507745 14891534 ~ 14921003 (+)
G73533 NA other upstream 779197 14648829 ~ 14649551 (+)
LOC103043719 NA other upstream 2530817 12871484 ~ 12897931 (+)
LOC103022150 brsk2a,brsk2b,LOC107707552,LOC107675281,LOC107600443 other upstream 4801784 10272919 ~ 10626964 (+)
G72621 NA other upstream 5346608 10078579 ~ 10082140 (+)
svip svip other downstream 142657 15572302 ~ 15577533 (+)
G74169 NA other downstream 857031 16286676 ~ 16288329 (+)
G74649 NA other downstream 3025206 18454851 ~ 18455197 (+)
LOC103029914 scamp5,scamp5a,LOC108436905,LOC103363822,LOC107395508,LOC107703195 other downstream 3041059 18470704 ~ 18479345 (+)
G74832 NA other downstream 3653171 19082816 ~ 19085556 (+)

Expression


Co-expression Network