G73862


Basic Information

Item Value
gene id G73862
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 15430147 ~ 15431307 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU99596
GTCTGAAGAGTTTTAATGCCTTTAAAGGTCGACTGTCAGATTATCAGATTTAACACAATTATAGTTTGTAATAATTATTGTATGATTAGTTGATTAATCTAATGATATAAGATATACAAGATACGATAAGAGATCAGATGTAAAATGGTTTAATAAGCTGATAATTGTAAATATAACAATGTGGGTTAAGAACAACAATGCAAGAGCTTCCAAAACAGACATGAGAGGACCTAAATTATAAACCTCATGCAGAAACAATGCCAACAGCTAGTCTTAAACAGATatataaggcaaaaaaaaaaacaggtaaaggTGATCAGCAGGAGCAGGAGAACAGTCTTTGATTCGTAAAGATAGATGACATCATGAGGGGTGGAATATGGAAAATTTAGTGGAGGCAGAATGTGTGACAACAAAGACAGCAAAAAATATTCTGCAACAAAAATACTTCAGTGATAAACAGCAACCATTTACCTGAAGTGGAGTTAAACTTTATCGTAACAATGATTTACAGTCTGTAGCAACAGCCTTTTAGGTTACATTTTCTCACTCATACATGACCAGTAAAGTAAACAGAGCAAtataaaatggcaaaacaacaatgttagaAAATACATAGGTCAAAGTTACATTATCCTAACAACAGTGATCCAGAAATGACTTTTAACAtggggattcgtttctcaggagGTCCTgggataattttctcttttatgggggtcctctgagATTTAATTCCCATCTGGAACGACCATGCATGCGTTTTTCTGaggtcctctgagaaaattacagtctaagttacctactgtttttcaaggaactctgtggtcctccggtcttgtccggacgcacatctctgactTTAATCACCTTGCGTTTAACAAAATAACTATTTGTCCGCTGCCAGGCACCGTAACtacactttgggcacgcgttttcacggagatccacgtgaacacaacagcgagtggaaatggaggagcttctaaacgtgatgtcatgtgaccgagaaagccaaaaaactcctgtcctcctgtttttttcaattgcactcctgatgcaagagttttatcactgagtaaagggtgtaaaatatattttaaacagacGTCCCTAAACATtcctgtctggatagggcttatgCTGGTAGGTTAGCACATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU99596 True 1161 lncRNA 0.37 1 15430147 15431307

Neighbor

gene id symbol gene type direction distance location
LOC103038669 kif21a coding downstream 139435 15228039 ~ 15290712 (-)
LOC103035545 LOC108428749,LOC105908727 coding downstream 355378 15001175 ~ 15074769 (-)
irx3 LOC103035229,LOC108428748 coding downstream 462846 14964498 ~ 14967301 (-)
rbl2 rbl2 coding downstream 540392 14868932 ~ 14889755 (-)
LOC103033621 NA coding downstream 572551 14849582 ~ 14857596 (-)
fibin LOC108442682 coding upstream 166 15431473 ~ 15434025 (-)
ano3 ano3,LOC107677449 coding upstream 29380 15460687 ~ 15543780 (-)
LOC103042382 LOC108442690 coding upstream 132664 15563971 ~ 15571540 (-)
gas2 gas2,LOC107677431,LOC107728426 coding upstream 149729 15581036 ~ 15621857 (-)
LOC111193057 NA coding upstream 190674 15621981 ~ 15624917 (-)
LOC111193098 NA non-coding downstream 112060 15314637 ~ 15318087 (-)
G73760 NA non-coding downstream 240812 15188594 ~ 15189335 (-)
LOC103036159 NA non-coding downstream 318783 15085780 ~ 15111364 (-)
G73697 NA non-coding downstream 344423 15085494 ~ 15085724 (-)
G73694 NA non-coding downstream 348848 15081057 ~ 15081299 (-)
G73870 NA non-coding upstream 17367 15448674 ~ 15528462 (-)
G73869 NA non-coding upstream 18197 15449504 ~ 15454610 (-)
G73877 svip non-coding upstream 141027 15572334 ~ 15577498 (-)
G73910 NA non-coding upstream 212514 15643821 ~ 15644252 (-)
LOC111193099 NA non-coding upstream 421995 15853302 ~ 15953813 (-)
LOC103040324 NA other downstream 15534 15381329 ~ 15414613 (-)
LOC103037068 cpne8,LOC108274474,LOC107679956,LOC107752477,LOC107723993,LOC105026415,LOC106561599,LOC105028206 other downstream 215863 15123814 ~ 15214284 (-)
hbp1 hbp1,LOC107732286,LOC107701066 other downstream 632864 14709058 ~ 14797283 (-)
LOC103025073 dynlrb2,LOC103025073,LOC106573385 other downstream 884611 14542196 ~ 14545536 (-)
G73172 NA other downstream 2808791 12610834 ~ 12621356 (-)
LOC103046265 pkp3 other upstream 326996 15758303 ~ 15780678 (-)
LOC103041134 rps27l,zgc:136826,LOC107752326,LOC107598918,LOC101156845 other upstream 1035782 16467089 ~ 16470323 (-)
nrg4 NA other upstream 2445719 17877026 ~ 17885395 (-)
G74591 isl2,LOC105022634 other upstream 2551440 17982747 ~ 18029747 (-)
G74791 NA other upstream 3507867 18939174 ~ 18940464 (-)

Expression


Co-expression Network