G73870


Basic Information

Item Value
gene id G73870
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 15448674 ~ 15528462 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU99607
ggCAAAGCAAGACAGAAactagagagaaaaaaaacaggcaaagaaATTAGTGGGCCAACAGTGCTGCTCCCCTCATACGATCAGGGGAGGTTCACTCTATAggaagaaatacatttttaaaaattacaaattaaaaatctcattCAGGGCTTTTTTTCCTGCTGTTAAACATGACCAAATTTTCTTTTAGTTACCAGACATAACTTGTCCGGTTGTGTCTGGAACAAAAGCAATATTGTTGTATGCCTCATCCTGCAAGTCATAACTTTGCTTTTTCCCATTTCTCCCAGTCTTAATTATTTTGTCCTGATCTGGGTGAATCTCCCATGCGGTTCCAAAGTCCAGATCAGCCAGATC

Function

GO:

id name namespace
GO:0022857 transmembrane transporter activity molecular_function

KEGG:

id description
ko04978 Mineral absorption

RNA

RNA id representative length rna type GC content exon number start site end site
TU99607 True 357 lncRNA 0.39 2 15448674 15528462

Neighbor

gene id symbol gene type direction distance location
fibin LOC108442682 coding downstream 14649 15431473 ~ 15434025 (-)
LOC103038669 kif21a coding downstream 157962 15228039 ~ 15290712 (-)
LOC103035545 LOC108428749,LOC105908727 coding downstream 373905 15001175 ~ 15074769 (-)
irx3 LOC103035229,LOC108428748 coding downstream 481373 14964498 ~ 14967301 (-)
rbl2 rbl2 coding downstream 558919 14868932 ~ 14889755 (-)
LOC103042382 LOC108442690 coding upstream 35509 15563971 ~ 15571540 (-)
gas2 gas2,LOC107677431,LOC107728426 coding upstream 52574 15581036 ~ 15621857 (-)
LOC111193057 NA coding upstream 93519 15621981 ~ 15624917 (-)
slc17a6 slc17a6,slc17a6a,LOC107555703,LOC107570095,LOC107677426 coding upstream 116617 15645079 ~ 15660833 (-)
LOC103041761 NA coding upstream 133540 15662002 ~ 15663287 (-)
G73862 NA non-coding downstream 17367 15430147 ~ 15431307 (-)
LOC111193098 NA non-coding downstream 130587 15314637 ~ 15318087 (-)
G73760 NA non-coding downstream 259339 15188594 ~ 15189335 (-)
LOC103036159 NA non-coding downstream 337310 15085780 ~ 15111364 (-)
G73697 NA non-coding downstream 362950 15085494 ~ 15085724 (-)
G73877 svip non-coding upstream 43872 15572334 ~ 15577498 (-)
G73910 NA non-coding upstream 115359 15643821 ~ 15644252 (-)
LOC111193099 NA non-coding upstream 324840 15853302 ~ 15953813 (-)
G74091 usp3,LOC107659494 non-coding upstream 575154 16103616 ~ 16108725 (-)
G74199 NA non-coding upstream 674062 16202524 ~ 16215525 (-)
LOC103040324 NA other downstream 34061 15381329 ~ 15414613 (-)
LOC103037068 cpne8,LOC108274474,LOC107679956,LOC107752477,LOC107723993,LOC105026415,LOC106561599,LOC105028206 other downstream 234390 15123814 ~ 15214284 (-)
hbp1 hbp1,LOC107732286,LOC107701066 other downstream 651391 14709058 ~ 14797283 (-)
LOC103025073 dynlrb2,LOC103025073,LOC106573385 other downstream 903138 14542196 ~ 14545536 (-)
G73172 NA other downstream 2827318 12610834 ~ 12621356 (-)
LOC103046265 pkp3 other upstream 229841 15758303 ~ 15780678 (-)
LOC103041134 rps27l,zgc:136826,LOC107752326,LOC107598918,LOC101156845 other upstream 938627 16467089 ~ 16470323 (-)
nrg4 NA other upstream 2348564 17877026 ~ 17885395 (-)
G74591 isl2,LOC105022634 other upstream 2454285 17982747 ~ 18029747 (-)
G74791 NA other upstream 3410712 18939174 ~ 18940464 (-)

Expression


Co-expression Network