CI01000009_05362086_05363378


Basic Information

Item Value
gene id CI01000009_05362086_05363378
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 5362042 ~ 5364081 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000009_05362086_05363378.mRNA
ACAGTTTGAAATCTGAGATCAAGGTTATTCTTCAATCCTATCTATATGTCAGAATTTTAGGTTTTAGAATTGACACGAGTTTTTAAAGCCTAAAAAAAAGCATGCTTGTTCAGAATTAAAGTGGGAAAAATAGCTTAAAAGCAAATTTCCTTAGGGTTTGTATCTCAGCATCTCATCTGTTTAAAGGATGGGAGTCATGGGACCTATGAAAAAAAACAAAACAAAACCGAGGAGGCATGACTCTGTTGACTGCAAACAATAAGATCTTTTGTCTTCTCAGACTGTCACAGAAAAATTTAATTCTCTTCGCATGTCACAAAGGTGCTGTGGTTACAGACAAGCATGATGATGAAGACGAGTAGGATATTCCAGAATATATCATCTTCATTTACAAAATCAAAACACAAGAGAAAAGCTCACCACACTTTAACGTGAATGAGAACCGAGAATAAAATAACTGAAACAGAGTAGCAGCTTAATATATGGTCACCTCAATCAATAAAATTCTTATGATGCTCCTCATTTTGTAAGTTTCTTACAAAATATATAAAACCTCTGCTACTTTGTTAATTTATGTTGTGTTAAATTGTTCTGAACATGACAACAAGCAAACACCACTGTCACTTACATACAGCTGTGAATGTAGACCCGCCCACTTATCCAAATCGCTGTGCACTGACACATAAGTTGACCAATAGAAACAATGATTGGCAACTTGTGCAAACAACTATCCAATAGGATCGCACACGCCAGCGCTGATGATGTTGCTGCTACTGCACCAGGAGCTTTGGAGATACCTATCTGCACAGCACGGATGAAGACTCCTTCGCTAAAGGACACTTGTGAGGTCATCTTGGGGTGTACAGCTTGTGTGGATCAATGCATCAATGCGCACGCACCATGGAGTCGTACTCTGCACGGTCATCTCTCACCAAACCACACTTTTGCGGACACTATTTGCTCCTGTCATGAAAACGTGGAGATCAAGCGTGATGGGCGTAGGAAGGGGTTAGAGAATCGTAATTTGTACCCAGAGGTGGTTTGTGTTTATGAATTGAAATGTGGCGCACAATTACTCCCTCTGCTGTTTACGTCCTCTAATGCTCTAGCCAACTGAGGATGTGTCCCAAATGACTACTTTGTATAGCCTATTTAATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000009_05362086_05363378.mRNA True 1161 mRNA 0.40 4 5362042 5364081

Neighbor

gene id symbol gene type direction distance location
CI01000009_05278137_05361256 ADCY5 coding downstream 564 5277137 ~ 5361478 (-)
CI01000009_05190789_05192684 NA coding downstream 169152 5190494 ~ 5192890 (-)
CI01000009_05110455_05136845 NA coding downstream 223728 5110205 ~ 5138314 (-)
CI01000009_05046374_05094978 SEMA5B, SEMA5BA coding downstream 266069 5046300 ~ 5095973 (-)
CI01000009_04976520_04987680 NA coding downstream 374335 4976486 ~ 4987707 (-)
CI01000009_05367161_05370504 PTPLB, HACD2, DKFZP459B2333 coding upstream 1854 5365766 ~ 5370504 (-)
CI01000009_05402729_05410456 NA coding upstream 38423 5402504 ~ 5410456 (-)
CI01000009_05513478_05515588 NA coding upstream 149188 5513269 ~ 5515588 (-)
CI01000009_05571226_05587885 NA coding upstream 206420 5570501 ~ 5588015 (-)
CI01000009_05675971_05682578 NA coding upstream 311691 5675772 ~ 5683383 (-)
G53425 NA non-coding downstream 110283 5250290 ~ 5251759 (-)
G53476 NA non-coding downstream 120692 5240424 ~ 5241350 (-)
G53415 NA non-coding downstream 344884 5013895 ~ 5017158 (-)
G53173 NA non-coding downstream 514939 4846901 ~ 4847103 (-)
G53167 NA non-coding downstream 523271 4838462 ~ 4838771 (-)
G53487 NA non-coding upstream 5499 5369580 ~ 5369781 (-)
G53490 NA non-coding upstream 10189 5374270 ~ 5374719 (-)
G53498 NA non-coding upstream 23240 5387321 ~ 5387664 (-)
G53503 NA non-coding upstream 29444 5393525 ~ 5394325 (-)
G52828 NA other downstream 1130573 4217420 ~ 4231469 (-)
CI01000009_03261739_03262843 NA other downstream 2100085 3261038 ~ 3262843 (-)
CI01000009_02885473_02893975 NA other downstream 2462635 2883688 ~ 2893975 (-)
G52410 NA other downstream 2799509 2551724 ~ 2562533 (-)
G53515 NA other upstream 138314 5502395 ~ 5505248 (-)
G55814 NA other upstream 3061740 8425821 ~ 8428012 (-)
CI01000009_08858198_08860555 NA other upstream 3494071 8856310 ~ 8860563 (-)
G59097 NA other upstream 6924136 12288217 ~ 12289518 (-)
CI01000009_13975122_13976026 NA other upstream 8611307 13975099 ~ 13978614 (-)

Expression


Co-expression Network