G73975


Basic Information

Item Value
gene id G73975
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 15993169 ~ 15993836 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU99740
tgacaaaacaacaggggaaggtgcaaagaccgacagcaaacgtagattaacaggtactatttatactaaacatgaaacaatgaacacctggggagacaggtaacgaggggcggagctacacacgtgatggaaaagtactagagaaacacactaggaaacggggaaaacacaggaaaacatagcgagggcgtaacagaagcccctccctaaacgcgcagctcccgaggcgcgtaaaaacgaaccccgggggccggcggcggggagaggccgggaaaCACAAGAGACGAGACCTGAGACTTAACATGGGGCAGAACTGGAGACTGGACTGAAGAccggacaggagactggacagagaaaGGAGACTGAACCGGGGACGTgactggagactggacattgggcgagacaggagactggacaggaaactggacaggggacgatgactggacgtgagacatgACGGGTGACTGGacaggactagacatgggaacgggaacaaaaacattaacaggaacagacacgaagacggtgacaggaacaggcacagaaaaaccagacaagacaggaacaggaacacagacagacatGGGGACCAGAACAGGAAGCGACATGGGGACCAGAACCacttggggatgcccaggactggctaaagtctgtGGGGTAGTCCATGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU99740 True 668 lncRNA 0.54 1 15993169 15993836

Neighbor

gene id symbol gene type direction distance location
stra6 stra6,LOC107751266,LOC107589314,LOC107703182,LOC107662458 coding upstream 14066 15951937 ~ 15979103 (+)
LOC103021835 cyp11a,LOC108442685,LOC106561846,LOC105007422,LOC107703186,LOC107751280 coding upstream 153322 15831457 ~ 15839847 (+)
stoml1 stoml1 coding upstream 164620 15821393 ~ 15828549 (+)
nr2e3 nr2e3,LOC107595245,LOC105892475,LOC107589312 coding upstream 178547 15810409 ~ 15814622 (+)
LOC103046771 LOC103046771,LOC108442701 coding upstream 194718 15785953 ~ 15798451 (+)
LOC103023069 commd4,LOC103023069,LOC107576274,LOC107757759,LOC107598913 coding downstream 33626 16027462 ~ 16031438 (+)
neil1 NA coding downstream 38538 16032374 ~ 16040050 (+)
LOC103024759 NA coding downstream 95029 16088865 ~ 16093616 (+)
usp3 usp3,LOC107659494 coding downstream 101373 16095209 ~ 16108728 (+)
fbxl22 fbxl22 coding downstream 127833 16121669 ~ 16133261 (+)
G73970 NA non-coding upstream 96647 15895719 ~ 15896522 (+)
G73941 pkp3,LOC107589311 non-coding upstream 228044 15764540 ~ 15765125 (+)
G73891 NA non-coding upstream 323400 15666348 ~ 15669769 (+)
G73832 NA non-coding upstream 363991 15571269 ~ 15629178 (+)
G73819 NA non-coding upstream 535312 15454935 ~ 15457857 (+)
G73990 man2c1,LOC107752311 non-coding downstream 56873 16050709 ~ 16051543 (+)
LOC103025699 NA non-coding downstream 140648 16134484 ~ 16147862 (+)
G74168 NA non-coding downstream 292422 16286258 ~ 16291939 (+)
G74182 NA non-coding downstream 379792 16373628 ~ 16373843 (+)
G74191 acsbg1 non-coding downstream 453444 16447280 ~ 16450389 (+)
svip svip other upstream 415636 15572302 ~ 15577533 (+)
rpgrip1l rpgrip1l other upstream 1072166 14891534 ~ 14921003 (+)
G73533 NA other upstream 1343618 14648829 ~ 14649551 (+)
LOC103043719 NA other upstream 3095238 12871484 ~ 12897931 (+)
LOC103022150 brsk2a,brsk2b,LOC107707552,LOC107675281,LOC107600443 other upstream 5366205 10272919 ~ 10626964 (+)
G74169 NA other downstream 292840 16286676 ~ 16288329 (+)
G74649 NA other downstream 2461015 18454851 ~ 18455197 (+)
LOC103029914 scamp5,scamp5a,LOC108436905,LOC103363822,LOC107395508,LOC107703195 other downstream 2476868 18470704 ~ 18479345 (+)
G74832 NA other downstream 3088980 19082816 ~ 19085556 (+)
cadps2 NA other downstream 3146313 19140149 ~ 19322775 (+)

Expression


Co-expression Network