LOC103022764 (uevld,LOC108275186)


Basic Information

Item Value
gene id LOC103022764
gene name uevld,LOC108275186
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 11037500 ~ 11048398 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007228059.3
GGCTGCTGGTGGAGTGTTGATGTGAGCGTTTGCGGAAGCTGAGGGAGCTGTCAGGAGGCTGAGCTGAAGAGTTAGTGTTAAACATGGAGCTGAACTCAGAGCCGCTCAAAAAGATCCTGTCTAAGtataaatttcGAGATGTTGCCATTGAGGAGCTTCAGAAACTTAACCGTGTTTATCCTGACATGAAACTGAAGACTGGTTCTTACACGTTTAGTGACAGCACTCAAAGGGACCTGCTAAACCTGGTTGGCAACATCCCAGTCAAATACAAggGACACTCTTACAACTTGCCCATCCAGTTATGGCTGTTGGATTCATTCCCCTTCACACCACCCATTTGCTTTCTACGGCCCACTTCCAACATGATGATCAGAGAGGGCAAACATGTGGATGCCAAAGGCAGAATCTACCTGCCTGGCCTACACAACTGGGACCATCCAAAATCATCTGTAAGTGTGCTCTTGGAGGAGATGATTGCTAAGTTTGAAGAGGATCCTCCATTAGGCATGAAGTCTACAGGAGATGGAAAAGATCCCAATGAGCTGCTCGCTTGTGTGTCGCATCTAAACATCACTGAAGGGGGAAATCGACCTGATAAGGGTGTGAATAAAGTCTCTGTGATAGGAGGAGGAGACCTGGGGATGGCTGCTGTGTTGAGTATCATggcaaaaAGCCCTGTGGACAAACTGGTTTTGATTGACATACCAGAAAGTTCAACCAAGGGTGGTACAATGGACCTAGAGATCTTCAGTTTGCCAAATGTGGAAGTTTCAAAAGACCTGTCAGCCTCAGCAGGTTCcaaggtggtggtggtgactGCAAACGCTTGGAGTGAGGAGCAGTCGTATGCAAGTGTGGTGCAGACAAATGTAGATATGTACAGCCGCATCATCCCGAGCCTGGCCCGCCTCAGCCCCACGGCAGTGCTGCTCATCGTTTCCCAGCCTGTGGATATAATGACGCATGTGGCTTGGAGGCAGAGTTGTCTGCCGCCAACACACGTGATTGGTGCAGGCTGTAACCTGGAATCAGAGAGACTCTCTTATGTCCTCAACATTGCTCTACTGGCCAACAAATCCGACAAACAGGCCTGGGTCATAGGAGAGGTGTCCGACAACAAGGTTGCTGTATGGGGGAGTTCAGGAACAAGTGTGGACAAACATCAAGTGCTGGCTCCAGTGACCAGCTCCACAAAGCCACTAATAGAGAGGGGGCTGGAGATGTTGAAAGGgagaggtcagaggtcatgGTCAGTGGGACTGTCCATCGCTGATATCACTCACAGCGTTCTCACTGATCAAAGGAAAACACACTCCATCACCACGCTGGCTCAGggatgGGGTGGAATTGGTTCGGAGGTGTTCCTCAGCTTACCTTGTGTGCTGGGAGCGAACGGATCTACCCGCCTGGCAGGAGTGGCTCTTACACCAGAAGATGACGCCAAACTGAGGGAGAGCGTCACATCTCTAAGCAACTTCTTCACGCAATTGAGAATATAGCTACAAAAACCCCTCTGAGACACCAGCGCTGCTGCAGTGCAGTAACCAAACAATCATCATATGTTTAGAGGGATTCATGAAAATAACCTCATTCAGTCCCACAGCCTCTGGCTGAGTTCAATACTATAAAATTGCAATCTTAGACTGCATGGTGCCTTCTGATAAAACAAACCTTTGCCAGCATGTAAAGTAGGCGACCACAAAGATTGTGTGTAGCCTTGTGCTGTCTGAATGCACTGCATTACCAAAGGTGacacatacacaaataaacattcCATAACCCAGTGTTTACCCACCTTGGTTCTTAAGGCACCCTGCCCTGCGCATTTTATATGGATACCCTGCTTCTGATTCCTCTGCAACTCAGGAAAAAGGTTTTGCAACTCAGGAGGGCTTGTGAATGTGAGAGCtggaaaaacactaaaatgtgcagagcagGGTGCCTCCAGGACTGAAGAATACTGATATAAACTGAATAGACATTAGTGTCATCACTCAGagagctttatatatattttccatctAATAAATTAAAGTTGCTTCAAATGGTCCTTTGAGCAATGCCAAAG

Function

symbol description
uevld Predicted to enable oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor. Predicted to act upstream of or within several processes, including carbohydrate metabolic process; cellular protein modification process; and protein transport. Orthologous to human UEVLD (UEV and lactate/malate dehyrogenase domains).

NR:

description
PREDICTED: ubiquitin-conjugating enzyme E2 variant 3

GO:

id name namespace
GO:0006464 cellular protein modification process biological_process
GO:0015031 protein transport biological_process
GO:0044262 cellular carbohydrate metabolic process biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007228059.3 True 2071 mRNA 0.48 12 11037500 11048398

Neighbor

gene id symbol gene type direction distance location
spty2d1 spty2d1 coding upstream 2672 11029486 ~ 11034828 (+)
igsf22 igsf22 coding upstream 36909 10975721 ~ 11000591 (+)
tsg101 tsg101,tsg101a coding upstream 815673 10212563 ~ 10221827 (+)
LOC103047796 NA coding upstream 825004 10207709 ~ 10212496 (+)
hras hras,rash,LOC107562835,LOC103357265 coding upstream 831378 10185737 ~ 10206122 (+)
th th,LOC108274586 coding downstream 57256 11105654 ~ 11116630 (+)
LOC103024122 LOC108439251,LOC100136550,LOC100304637,LOC107675272 coding downstream 74781 11123179 ~ 11132277 (+)
LOC103028645 LOC108428835 coding downstream 514934 11563332 ~ 11634593 (+)
LOC103029705 mob2,LOC108411394,LOC108274974 coding downstream 617417 11665815 ~ 11733195 (+)
LOC103038976 LOC108428833 coding downstream 877589 11925987 ~ 11938380 (+)
G72766 NA non-coding upstream 21893 11008549 ~ 11015607 (+)
G72753 NA non-coding upstream 235728 10799546 ~ 10801772 (+)
G72752 NA non-coding upstream 238655 10797992 ~ 10798845 (+)
LOC111193092 NA non-coding upstream 938355 10097259 ~ 10099145 (+)
G72617 NA non-coding upstream 978614 10058685 ~ 10058886 (+)
G72871 NA non-coding downstream 136268 11184666 ~ 11184981 (+)
G72875 NA non-coding downstream 174376 11222774 ~ 11223004 (+)
G72876 NA non-coding downstream 176396 11224794 ~ 11226186 (+)
G72882 NA non-coding downstream 472614 11521012 ~ 11522661 (+)
G72893 NA non-coding downstream 519179 11567577 ~ 11625496 (+)
LOC103022150 brsk2a,brsk2b,LOC107707552,LOC107675281,LOC107600443 other upstream 410536 10272919 ~ 10626964 (+)
G72621 NA other upstream 955360 10078579 ~ 10082140 (+)
LOC103043718 LOC103043718,LOC108442465 other upstream 1067458 9968506 ~ 9970042 (+)
G72281 LOC107754548,LOC108274935,LOC107754545,LOC107754498 other upstream 1888081 9142899 ~ 9149419 (+)
LOC103030246 pcdh2ab8,pcdh2ab10,pcdh2ab12,LOC108430950,LOC101884096,LOC108274577,LOC107588388,LOC108430926,LOC108430925,LOC108430922,LOC108275110,LOC108430948,LOC108275111,LOC107588302,LOC107660888,LOC107754492,LOC107655665 other upstream 2001474 8869128 ~ 9036026 (+)
LOC103043719 NA other downstream 1823086 12871484 ~ 12897931 (+)
G73533 NA other downstream 3600431 14648829 ~ 14649551 (+)
rpgrip1l rpgrip1l other downstream 3843136 14891534 ~ 14921003 (+)
svip svip other downstream 4523904 15572302 ~ 15577533 (+)
G74169 NA other downstream 5238278 16286676 ~ 16288329 (+)

Expression


Co-expression Network