rhcg (rhcg)


Basic Information

Item Value
gene id rhcg
gene name rhcg
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 12638871 ~ 12651916 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007228128.3
cctggtttATAAGGCTGTATTGAGGGACAGACAGCTCTCACTCTGGCCGCTCTGTCTGCTCTGTGGCTGAAATGGGGAACTGCATCGTGCCCTACTGTGACGGGCCCAAGAGCACCAACGTCAGATGGACTCTGCCGGCCGTTTGCTTCGTCTGGCAGTGCGCCATGGTCATCCTGTTCGGCTGCTTCGTCCGCTATAACGACGAGGTGGACGCGCACTGGCCTGAGTTCAAAATCGAAAAGAACATAACCAGCGACGCAGAGAACGACTTCTACTTCAGATACCCCAGTTTCCAGGATGTCCACGTCATGATTTTTGTGGGATTTGGTTTCCTCATGACGTTTATGAAACGCTACAGCTTTGGTGCTGTGGGCTTCAACTTCCTTGTCGCAGCTTTTGGAATTCAGTGGGCTCTGCTAATGCAAGGCTGGTTCCATCATATTGATTCCGAAGACGGGATGATCAAGATCGGTGTAGAAAACATAATCAACGCAGACTTCTGTGTAGCATCGTGTCTGATTGCATACGGAGCACTGCTGGGGAAGGTCAGCCCTGTGCAGCTGATGGTGATGACCCTGTTTGGTGTCACCTTGTTTGCTGTAGAGGAATATATTATACTGAACCTCATTCATGCCAAAGATGCTGGAGGCTCCATGGTGATTCATACCTTTGGAGCTTACTTTGGTCTGTCCATCTCGTGGGTCCTTTATCGGCCAAACTTGAAAGACAGCAGTAAGCTAAATGGGTCAGTCTACCACTCTGACGTGTTTGCTATGATTGGAACTCTGTTTCTGTGGATGTTCTGGCCCAGTTTCAATTCTGCCATTTGTCAACACGGAGATGGTCAGCACAGAGCAGCCATCAACACCTACCTGTCATTGGCTGCCACAGTTCTCACCACGTTTGCCATCTCCAGCCTGTTGGAGAAGAATGGAAAACTGGACATGGTACATATCCAGAACTCCACGCTGGCAGGTGGTGTTGCTGTAGGAACAGCTGCTGAGTTCATGCTGTCGCCATATGGAGCTCTGATAGTAGGATTCTTCTGTGGTGTCATCTCCACACTGGGCTACATCTATCTCTCACCCTTCTTGGAAAGGAAGCTTAAGATCCAGGATTCATGTGGTGTTCATAACCTGCACGCCATGCCAGGTGTGATTGGAGGAATTGTAGGAGCCATATCTGCTGCTGGTGCTACTGAATCTGTTTATGGCTTACAAGGGTTGAAAGATACATTTGATTTTACTGGTGATTTCAAGAACAGGACTCCTGCTGCCCAAGGCGGATTCCAGGCAGCTGCaatgtgtgtgtctatatgttTTGGAATAGGAGGTGGAATATTTGTGGGTCTAATCTTGAGGATGCCCCTCTGGGGAGATCCAACAGATGATAAATGCTTTGATGATGTCATCTACTGGGAGGTGCCTGATGAAGAAGAGCCTGTTGAAGCGGATTTACACTACAACAATCACACAGTGGCCAATAATCATGTAGAAGTAACTGAAACTCGCTTCACTGTGGGTCAGCAATAATCCTGCAACCGGGATGTGATTCCAGCCTCCTCTCTACAACCCTGAGTCTGCACCTTCTCCTctactagcagcagcagcagcagcagcagcagcacagcaagATCTCCTCTACTGTATCCCTCACACCAGTAACCCCGTCACCAGCATCTGTGGACTGAAAGAATTAGGGGACCCATTTACTGTATcactatatttttataaatatcagAGACTATacataaaacacatgaaaataaatagaaattgaACACATAATTtgtttcagttatttattaattctccaaaaatagcattttttaagtaacaccTGACAGACAGTGACGTTTTACAGTATCAGAGTTTTTAAGCAACATTTAATATGATCAAATAGAAGGTGGGTTTTGCCGTTTTACTTCTACACAACAAATCTGCCAGTGCTCATTCAACACTGTCAGAGTAAAATTAACACGTGACTCATAAAATtctagttttattttaacactgaCAAATTTGCTGTGTACATCATTTTTAACCCAACAATCCAAAAATCAATCTATCTAAAtctattttatatgtatttatttctgtgttcAGTTTTACTATCTACAATTGCTGATTATATATTAATCTTACAAAAtcaaacacattataaaaaaaatcaattgtgTAAATGAAAGAGTGAATTAATGATTTGAATTAGAACACGTAACAAAGTTACACAATTGAAAATTGTACAAAATGTGTCAGTAAAACTGACTGGCTGTAAATTTTCCTTCTTTCAGAATAGAATCAATTAATCCTGTCATAAAAAAGCCCTGATTTATAATCTTATTTAAATATCTTGTGTAATGCTTACATTGAGAAAGAACATTTCTTCCCTTGTAAGAAATTTTATCTTTATGCATAAATActtcatttttgtc

Function

symbol description
rhcg Enables ammonium transmembrane transporter activity; ankyrin binding activity; and identical protein binding activity. Involved in cellular ion homeostasis and transepithelial ammonium transport. Located in apical plasma membrane and basolateral plasma membrane. Is integral component of plasma membrane.

NR:

description
ammonium transporter Rh type C

GO: NA

KEGG:

id description
K06580 SLC42A, RHAG, RHBG, RHCG, CD241; ammonium transporter Rh

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007228128.3 True 2434 mRNA 0.42 11 12638871 12651916

Neighbor

gene id symbol gene type direction distance location
polg polg,LOC107557431 coding downstream 36630 12587239 ~ 12602241 (-)
LOC103039697 NA coding downstream 149691 12485646 ~ 12489180 (-)
LOC103038241 kras,rask,LOC105900436,LOC103038241,LOC107675271,LOC108428819,LOC108274959 coding downstream 182837 12445676 ~ 12456034 (-)
LOC111193054 NA coding downstream 289885 12343475 ~ 12348986 (-)
LOC103035544 LOC107742058,LOC107675302,LOC107595230,LOC107758756,LOC107549283,LOC108275297,LOC107675455 coding downstream 597809 12036675 ~ 12041062 (-)
gdpgp1 NA coding upstream 6977 12658893 ~ 12661807 (-)
unc45a unc45a coding upstream 10825 12662741 ~ 12674522 (-)
LOC103043208 furin,furinb,LOC107581806,LOC107720773,LOC107750721 coding upstream 70361 12722277 ~ 12871382 (-)
rag2 rag2,LOC107581808,LOC107720771,LOC107673237,LOC107750738,LOC107670203 coding upstream 292537 12944453 ~ 12949439 (-)
LOC103022766 NA coding upstream 1181637 13833553 ~ 13848142 (-)
G73176 NA non-coding downstream 14453 12621682 ~ 12624418 (-)
G73173 NA non-coding downstream 18358 12613606 ~ 12620513 (-)
G73162 fanci non-coding downstream 56417 12578858 ~ 12582454 (-)
G73159 fanci,LOC107670230 non-coding downstream 64287 12573311 ~ 12574584 (-)
G73119 LOC108428815,LOC108428741 non-coding downstream 99641 12502863 ~ 12539230 (-)
G73238 NA non-coding upstream 209197 12861113 ~ 12861628 (-)
G73281 NA non-coding upstream 337270 12989186 ~ 13088436 (-)
G73302 NA non-coding upstream 586037 13237953 ~ 13238314 (-)
G73322 NA non-coding upstream 764741 13416657 ~ 13417462 (-)
G73371 NA non-coding upstream 1176802 13828718 ~ 13830757 (-)
G73172 NA other downstream 17515 12610834 ~ 12621356 (-)
fbxo31 fbxo31,LOC107675295,LOC107751272,LOC107742043,LOC107662464 other downstream 73893 12548690 ~ 12564978 (-)
LOC111193053 tnni2a.2,LOC108428758,LOC108275295,LOC103035007,LOC107549280,LOC107595232 other downstream 587382 12048626 ~ 12051489 (-)
LOC111193052 NA other downstream 1093625 11520887 ~ 11545246 (-)
LOC111193093 NA other downstream 1412917 11224779 ~ 11225954 (-)
LOC103025073 dynlrb2,LOC103025073,LOC106573385 other upstream 1890280 14542196 ~ 14545536 (-)
hbp1 hbp1,LOC107732286,LOC107701066 other upstream 2057142 14709058 ~ 14797283 (-)
LOC103037068 cpne8,LOC108274474,LOC107679956,LOC107752477,LOC107723993,LOC105026415,LOC106561599,LOC105028206 other upstream 2471898 15123814 ~ 15214284 (-)
LOC103040324 NA other upstream 2729413 15381329 ~ 15414613 (-)
LOC103046265 pkp3 other upstream 3106387 15758303 ~ 15780678 (-)

Expression


Co-expression Network