pdhx (pdhx)


Basic Information

Item Value
gene id pdhx
gene name pdhx
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 13694428 ~ 13765050 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007228153.3
TGAACACACTGCGCTGCTGGAGGACACAAACATGGCGGCCTCCTTGCGGCTGGGGCGTCAGACGGTTTTAACCGGGTTGAGGATTATTAAAGTTAAGAGGTGTCAGTGGAGCCCGCAGGTATGCGGGGGTTTGGTCAGGCAGCTGTTTCAGTCCCCGGCTGTTTTCGGGGCCGCTCCTATCAAGGTACAGATGCCAGCGCTCTCCCCTACCATGGAGGAGGGCAACATTGTGAAATGGCTGAAGAAGGAAGGTGAGGCAGTGGCGGCTGGTGATGCTCTCTGTGAAATTGAGACCGACAAGGCTGTGGTTACCATGGAATCCAATGACGATGGAGTCCTGGCTAAAATTCTGatGGAGGAAGGTAGTAAGAGTGTGCGTTTGGGGACTCTCATTGCAGTGATGGTAGAAGAAGGGGAAGACTGGAAACAAGTGGAAATCCCTGCCGTATCCTCCCAGCCTGCCCAGTCCGCTCCATCTCCTGCTCCTCCCGCTGCTGCTCCAACCTCTACAACTCCTGTAGCCCCACCTCCTAGATCTGCAGAAGCTGGACAGTTGCGGTTAAGTCCTGCTGCACGGCACATACTGGACACACATGGCCTGGACCCTCATCTAGCCACAGCCACCGGCCCTCGTGGTCTCATCACTAAAGAGGATGCTCTAAACCTGCTGAAGAAGGGAGATGCTGCACGTCGAGCAGCTCCAGtatctgctcctcctcctcctgctgcctctgctccagctcctgcagctcctgccACTGCCACCCCCGCTCCTACAGCTGCTCCTGCCTCAGGCCGCCCTCTCTATCCAGCCATATCAGTGCCCGGCAAGCCTGGCGCTCCAGGCACCTTCACGGAGGTCCCAGCCTCCAATGTGCGCAGAGTCATCGCCCAGAGACTAACCCAGTCCAAAACCACCATCCCTCACGCATACGCTACAGTGGACTGTGACCTGGGGGCTGTCATGAAGCTTCGCAAGCAGCTTGCCAAAGagGAGATCAAAGTATCTGTCAATGATTTCATCGTGAAAGCTGCAGCTGTTACGCTTAAAGAGATGCCAGAGGTCAACGTGACCTGGTCAGGTGAAGGACCCCAGGCCCTGGACTCCATCCACATCTCCATCGCCGTGGCAACCGACCGCGGCCTCATCACCCCCATCATCAAAGACGCGGCGGACAAAGGTGTGCAGGAGATTGCCGCCAACGCCAAGGCCTTGGCACAGAAAGCAAGAGCAGGAAAACTGCTACCAGAAGAATACCAGGGGGGATCCTTCAGTATCTCCAACCTTGGCATGTTCGGCATCAGTGGCTTCAGCGCGGTCATCAACCCTCCACAGGCCTGTATCTTGGCGGTTGGCCGCTCCAGAGACGAGCTGACGCTGGCCCCAGAGGGCCCGGACGACTCGGGCCCTGTCCTTCGTACTCGGCAGCTTATGACGGTTACCCTGTCCAGCGACGGGCGGCTCGTGGACGACGAACTCGCATCCCGCTTCTTGGATAAATTTCGCGTTAATTTGGAGAAGCCCCAGCGCATGGCCCTGGCTTAGGATATGGAGGGAATTAGAGGGAAACAGAGAAATATATTGGACTGAGGGACTGTTACAAATGATGTAGAATAGAGTGATTTTCAGGGTtcagctggggaaaaaaaaaaaacgatggtCATGTTTCCTGTACTGGGATTTATTGCGTCCTCTCACTGGATATAAAGGTACATAAGTACATTGTGTGCTAGTTCTATGTCCCTTTTTTTGCTGGATGAAATGGTAAGTCGTAGGTGTGATGCTGTGGATAACAACGCTGCCTTCCCCGTGGCAGACTTGGGTTCAGTTCCCTGGCacatacacaacactacaccaaGAAGGCTAGAGATATACCTGCTGGTAAATGTGCATTcgaataccatattttttgcactataaggtgcaccgtattataaggtgcactaccaatgaacgtctattttctggtctattttcgcacataaggcgcactggattataatgtgcattttaagagacactataaggaacttctttatttagcaggtctcaccgTTGGATGGTGGTTGGGGAGTAactaactaagctaagtaaagctatgctaagtaaacaaaactgtgtt

Function

symbol description
pdhx Predicted to enable acyltransferase activity, transferring groups other than amino-acyl groups. Predicted to be part of pyruvate dehydrogenase complex. Predicted to be active in mitochondrion. Human ortholog(s) of this gene implicated in pyruvate decarboxylase deficiency. Orthologous to human PDHX (pyruvate dehydrogenase complex component X).

NR:

description
pyruvate dehydrogenase protein X component, mitochondrial isoform X2

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016746 transferase activity, transferring acyl groups molecular_function

KEGG:

id description
K13997 PDHX; dihydrolipoamide dehydrogenase-binding protein of pyruvate dehydrogenase complex

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007228153.3 True 2123 mRNA 0.53 11 13694428 13765050

Neighbor

gene id symbol gene type direction distance location
ehf ehf coding upstream 17352 13662809 ~ 13677076 (+)
rag1 rag1,LOC107750737,LOC107670202 coding upstream 751466 12934452 ~ 12942962 (+)
LOC103044030 LOC103044030,LOC108428802,LOC108428756 coding upstream 785367 12897785 ~ 12909061 (+)
man2a2 man2a2,LOC107750719,LOC107720774,LOC107670215 coding upstream 978770 12680106 ~ 12715658 (+)
trnar-ucg_4 NA coding upstream 1091004 12603352 ~ 12603424 (+)
cd44 LOC106561308,LOC106573350 coding downstream 29363 13794413 ~ 13828422 (+)
fjx1 NA coding downstream 243582 14008632 ~ 14011720 (+)
trim44 trim44,LOC107716865 coding downstream 312962 14078012 ~ 14161299 (+)
ldlrad3 ldlrad3,LOC106573355 coding downstream 472989 14238039 ~ 14389321 (+)
rccd1 NA coding downstream 781747 14546797 ~ 14550920 (+)
G73337 NA non-coding upstream 56726 13637016 ~ 13637702 (+)
G73332 NA non-coding upstream 184190 13509756 ~ 13510238 (+)
G73301 NA non-coding upstream 456216 13237960 ~ 13238212 (+)
G73298 NA non-coding upstream 468473 13225671 ~ 13225955 (+)
G73292 NA non-coding upstream 535749 13157769 ~ 13158679 (+)
G73354 NA non-coding downstream 3075 13768125 ~ 13768360 (+)
G73361 NA non-coding downstream 26280 13791330 ~ 13794158 (+)
G73359 NA non-coding downstream 63669 13828719 ~ 13830765 (+)
G73404 NA non-coding downstream 157551 13922601 ~ 13923296 (+)
G73416 NA non-coding downstream 238022 14003072 ~ 14003426 (+)
LOC103043719 NA other upstream 796497 12871484 ~ 12897931 (+)
LOC103022150 brsk2a,brsk2b,LOC107707552,LOC107675281,LOC107600443 other upstream 3067464 10272919 ~ 10626964 (+)
G72621 NA other upstream 3612288 10078579 ~ 10082140 (+)
LOC103043718 LOC103043718,LOC108442465 other upstream 3724386 9968506 ~ 9970042 (+)
G72281 LOC107754548,LOC108274935,LOC107754545,LOC107754498 other upstream 4545009 9142899 ~ 9149419 (+)
G73533 NA other downstream 883779 14648829 ~ 14649551 (+)
rpgrip1l rpgrip1l other downstream 1126484 14891534 ~ 14921003 (+)
svip svip other downstream 1807252 15572302 ~ 15577533 (+)
G74169 NA other downstream 2521626 16286676 ~ 16288329 (+)
G74649 NA other downstream 4689801 18454851 ~ 18455197 (+)

Expression


Co-expression Network