slc25a3 (slc25a3,slc25a3b,LOC107732290)


Basic Information

Item Value
gene id slc25a3
gene name slc25a3,slc25a3b,LOC107732290
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 14597965 ~ 14605957 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007228170.3
CGTTGCGGTCTCCTTCCTCCGACATTAGTGAGCGCAGAGCTCTCCTCGGTCTCTACGAGCGGCCGGCTGCGGAGGACAGAGGCGCCATTTTGAGTCGACCTTAACAACTACCTTCAATATGTATCCCACCACATTAACGCAGCTCGCCCGGGCGAACCCCTTCAGCGCCCCCCTCTTCACCCTGCAGAAAGTGGAGGAGCCCTCACAGACCGTCTCCACTAAAGCACAGAGCCGCAGACTCGCTGCAGCTTCTACAGCCGACACAGGTGATAGCTGTGAGTTTGGCTCTATGAAATACTACGCCCTCTGTGGCTTTGGGGGCATCCTGAGCTGCGGTATCACTCACACAGCTGTAGTGCCCCTGGACTTGGTCAAGTGTCGACTGCAGGTGGACCCAGCTAAGTACAAGAGCATCTTTACTGGATTCTCAGTCACAATCAAAGAGGATGGTGTGCGAGGCCTGGCTAAAGGTTGGGCACCCACTTTCATCGGCTACTCCATGCAGGGTCTCTGCAAGTTCGGATTCTATGAGGTGTTCAAGATATTGTACAGTGATATGCTTGGAGAGGAAAATACCTACATGTGGAGAACCTCTCTGTACCTGGCAGCATCTGCAAGTGCTGAGTTCTTTGCTGATATAGCTCTGGCCCCTATGGAGGCGTGTAAAGTGCGCATCCAGACCCAGCCAGGTTATGCCAACACCCTGAGGGAGTGTGCCCCCAAGATGTATGCGGAGGAGGGTCTCTGGGCATTCTACAAGGGTGTTGTCCCTCTGTGGATGAGGCAGATCCCTTACACTATGATGAAGTTTGCCTGTTTCGAGCGCACAGTTGAATTGCTATACAAGTATGTGGTGCCCAAACCCCGCAGTGAGTGCAGCAAGCCTGAACAGCTTTTGGTCACCTTTGTAGCTGGTTACATTGCTGGTGTGTTCTGCGCCATTGTGTCCCACCCTGCTGACTCTGTGGTGTCTGTGCTGAACAAGGAGAAGGGAAGCACAGCAGCTCAAGTACTCAAGAGGCTTGGACCCATGGGTGTGTGGAAGGGTCTGGTTGCCCGTATCATCATGATTGGTACTCTGACTGCCCTGCAGTGGTTCATCTACGATTCTGTCAAGGTCTACTTCCGCCTGCCCCGTCCCCCTCCCCCCGAGATGCCAGAGTCTCTGAAGAAGAAGCTGGGTCTCAGCGAGTAGAGATCATCTCTGCTCACCCCTCCCATCCCTTAATAGCAAACTTCCCTCctgttttctatatttaaacTCTCACGGCTGCCCTGTTGCTCACCTGGCTGCTGCTCGTCTCTTCCATCTGTGTGGTGAGAGGAGCTTCCAGTGGAAGTTCAGTTAAACTATGACGTGAATGAATGCCACCTGGTTTTAAGTATGTTTGTCAATAGAATGATTAAAAGATCATGTGGAAATATGTGAAGCTGTCCTTTTCTTTCCTGTCTAGATGTCATTTTGCACATTTATGTCCTGATTATAGAGAATTTATTTAGCGATTAATGCAAGGGACCCTGATGGTCAGTGTCTGTAGTATTATGAACATCACACTCCACACTCAGAGCACAAATGTGCATTGTCTGGATATTTGTTGACTAAAGGGGATGAAAtaaagcaattcaactgtcaA
>XM_007228171.3
CGTTGCGGTCTCCTTCCTCCGACATTAGTGAGCGCAGAGCTCTCCTCGGTCTCTACGAGCGGCCGGCTGCGGAGGACAGAGGCGCCATTTTGAGTCGACCTTAACAACTACCTTCAATATGTATCCCACCACATTAACGCAGCTCGCCCGGGCGAACCCCTTCAGCGCCCCCCTCTTCACCCTGCAGAAAGTGGAGGAGCCCTCACAGACCGTCTCCACTAAAGCACAGAGCCGCAGACTCGCTGCAGCTTCTACAGCCGAGGGAGACAGCTGTGAGTTTGGCTCGCAGAAGTATTTCATCCTCTGTGGCTTCGGTGGGATTCTGAGCTGTggtaccacacacacagcagtggtGCCTCTCGACTTGGTCAAATGCAGGTTGCAGGTGGACCCAGCTAAGTACAAGAGCATCTTTACTGGATTCTCAGTCACAATCAAAGAGGATGGTGTGCGAGGCCTGGCTAAAGGTTGGGCACCCACTTTCATCGGCTACTCCATGCAGGGTCTCTGCAAGTTCGGATTCTATGAGGTGTTCAAGATATTGTACAGTGATATGCTTGGAGAGGAAAATACCTACATGTGGAGAACCTCTCTGTACCTGGCAGCATCTGCAAGTGCTGAGTTCTTTGCTGATATAGCTCTGGCCCCTATGGAGGCGTGTAAAGTGCGCATCCAGACCCAGCCAGGTTATGCCAACACCCTGAGGGAGTGTGCCCCCAAGATGTATGCGGAGGAGGGTCTCTGGGCATTCTACAAGGGTGTTGTCCCTCTGTGGATGAGGCAGATCCCTTACACTATGATGAAGTTTGCCTGTTTCGAGCGCACAGTTGAATTGCTATACAAGTATGTGGTGCCCAAACCCCGCAGTGAGTGCAGCAAGCCTGAACAGCTTTTGGTCACCTTTGTAGCTGGTTACATTGCTGGTGTGTTCTGCGCCATTGTGTCCCACCCTGCTGACTCTGTGGTGTCTGTGCTGAACAAGGAGAAGGGAAGCACAGCAGCTCAAGTACTCAAGAGGCTTGGACCCATGGGTGTGTGGAAGGGTCTGGTTGCCCGTATCATCATGATTGGTACTCTGACTGCCCTGCAGTGGTTCATCTACGATTCTGTCAAGGTCTACTTCCGCCTGCCCCGTCCCCCTCCCCCCGAGATGCCAGAGTCTCTGAAGAAGAAGCTGGGTCTCAGCGAGTAGAGATCATCTCTGCTCACCCCTCCCATCCCTTAATAGCAAACTTCCCTCctgttttctatatttaaacTCTCACGGCTGCCCTGTTGCTCACCTGGCTGCTGCTCGTCTCTTCCATCTGTGTGGTGAGAGGAGCTTCCAGTGGAAGTTCAGTTAAACTATGACGTGAATGAATGCCACCTGGTTTTAAGTATGTTTGTCAATAGAATGATTAAAAGATCATGTGGAAATATGTGAAGCTGTCCTTTTCTTTCCTGTCTAGATGTCATTTTGCACATTTATGTCCTGATTATAGAGAATTTATTTAGCGATTAATGCAAGGGACCCTGATGGTCAGTGTCTGTAGTATTATGAACATCACACTCCACACTCAGAGCACAAATGTGCATTGTCTGGATATTTGTTGACTAAAGGGGATGAAAtaaagcaattcaactgtcaA

Function

symbol description
slc25a3b Predicted to enable inorganic phosphate transmembrane transporter activity. Predicted to be involved in phosphate ion transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of mitochondrial inner membrane. Is expressed in several structures, including digestive system; endocrine system; epidermis; nervous system; and pectoral fin. Orthologous to human SLC25A3 (solute carrier family 25 member 3).
slc25a3 Predicted to enable inorganic phosphate transmembrane transporter activity. Predicted to be involved in phosphate ion transmembrane transport. Located in mitochondrion.

NR:

description
phosphate carrier protein, mitochondrial isoform X1

GO:

id name namespace
GO:0006810 transport biological_process
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K15102 SLC25A3, PHC, PIC; solute carrier family 25 (mitochondrial phosphate transporter), member 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007228170.3 True 1634 mRNA 0.51 8 14597965 14605957
XM_007228171.3 False 1631 mRNA 0.51 8 14597965 14605957

Neighbor

gene id symbol gene type direction distance location
LOC103026417 LOC108428785 coding upstream 2029 14590603 ~ 14595936 (+)
LOC103025904 metap2,metap2b,LOC108428789,LOC108275287,LOC107569354,LOC107701059 coding upstream 35428 14556020 ~ 14562537 (+)
rccd1 NA coding upstream 47045 14546797 ~ 14550920 (+)
ldlrad3 ldlrad3,LOC106573355 coding upstream 208644 14238039 ~ 14389321 (+)
trim44 trim44,LOC107716865 coding upstream 436666 14078012 ~ 14161299 (+)
LOC103028647 ldhbb,LOC103028647,LOC108428782,LOC108275055,LOC105895664,LOC103366875,LOC106573069,LOC107744904,LOC107659842,LOC107589975,LOC107586539 coding downstream 1632 14607589 ~ 14614390 (+)
slc35b4 slc35b4,s35b4,LOC106561668 coding downstream 14514 14620471 ~ 14626071 (+)
LOC103027493 LOC108428780 coding downstream 21255 14627212 ~ 14637073 (+)
dus2 dus2,LOC105922392,LOC108229071 coding downstream 139311 14745268 ~ 14754530 (+)
LOC103030248 NA coding downstream 151366 14757323 ~ 14775204 (+)
G73514 dynlrb2,LOC103025073,LOC106573385 non-coding upstream 52452 14542198 ~ 14545513 (+)
G73468 NA non-coding upstream 273342 14323965 ~ 14324623 (+)
G73464 NA non-coding upstream 328241 14266776 ~ 14269724 (+)
G73443 NA non-coding upstream 432309 14164794 ~ 14165656 (+)
G73414 NA non-coding upstream 433625 14163344 ~ 14164340 (+)
G73529 LOC107551388,LOC107676462,LOC108428784,LOC107701063,LOC107754325 non-coding downstream 8461 14614418 ~ 14619324 (+)
G73527 NA non-coding downstream 31990 14637947 ~ 14638553 (+)
G73532 NA non-coding downstream 40486 14646443 ~ 14647562 (+)
G73566 NA non-coding downstream 69916 14675873 ~ 14676794 (+)
G73598 NA non-coding downstream 238488 14844445 ~ 14844664 (+)
LOC103043719 NA other upstream 1700034 12871484 ~ 12897931 (+)
LOC103022150 brsk2a,brsk2b,LOC107707552,LOC107675281,LOC107600443 other upstream 3971001 10272919 ~ 10626964 (+)
G72621 NA other upstream 4515825 10078579 ~ 10082140 (+)
LOC103043718 LOC103043718,LOC108442465 other upstream 4627923 9968506 ~ 9970042 (+)
G72281 LOC107754548,LOC108274935,LOC107754545,LOC107754498 other upstream 5448546 9142899 ~ 9149419 (+)
G73533 NA other downstream 42872 14648829 ~ 14649551 (+)
rpgrip1l rpgrip1l other downstream 285577 14891534 ~ 14921003 (+)
svip svip other downstream 966345 15572302 ~ 15577533 (+)
G74169 NA other downstream 1680719 16286676 ~ 16288329 (+)
G74649 NA other downstream 3848894 18454851 ~ 18455197 (+)

Expression


Co-expression Network