LOC103031298 (gpia,gpi,LOC108428767,LOC108274969,LOC107679975)


Basic Information

Item Value
gene id LOC103031298
gene name gpia,gpi,LOC108428767,LOC108274969,LOC107679975
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 14801718 ~ 14812498 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007228187.3
GCTGCACTGCCATCTCTCTCACTTCATCCGAGTGAATTTAGTGGGTGAGCAGACAGCTGGACTGAGCTTAGGACCACCGACCATCTCTGAACTGCCACAACCACCCTCACCATCATGGGGCTAACCAACGATCCCAACTACCGAAAACTGGAGCAATGGTACAAATCAAACGCTGGAGGTCTGAACATGAGGCAGATGTTCGACGGAGACAAGGACAGGTTCTCCAAATTCAGtttaaccCTCAATACAGATGATGGAGACCTACTTCTGGATTATTCAAAGAACCTCATCAATGAAGATGTGATGAAGATGCTGTTTGCCATGGCAAAGTCAATTGGAGTGGAAGAAGCCAGATCCCAGATGTTTGGTGGTGAGAAGATCAACTTTACTGAGGGCAGAGCTGTCCTCCATATTGCCCTGAGGAACCGATCTAACACTCCCATCATGGTGGATGGAAAAGATGTCATGCCTGAGGTGAACAGAGTTCTGAAGAAGATGAAAGACTTCTGTCATaGAGTGCGCAGTGGAGAGTGGAAAGGCTTCAATGGTAAGACCATCACTGATGTGGTCAACATTGGCATTGGAGGATCTGATTTGGGTCCTTTGATGGTGACAGAAGCACTAAAGCCATACTCCAAAGGTGGTCCTAACGTCTGGTTCGTCTCCAACATCGACGGGACACACATGGCTAAGACATTAGCCCAGCTGAATGCGGAAACCACTCTCTTCATCATTGCATCCAAGacattcaCTACCCAGGAGACAATTACTAATGCTGAGACCGCAAAGGAATGGTTCCTGCAGACAGCAAAGGATCCGTCTGCAGTGGCCAAGCATTTTGTGGCTCTTTCCACCAATGCGccCAAAGTGAGCGAATTTGGGATCGACACTGAGAACATGTTCGAGTTCTGGGATTGGGTTGGTGGGCGGTACTCGCTGTGGTCTGCTATTGGTTTGTCAATCGCTCTGCACGTAGGTTTCGATAACTTCGAGCAGCTTCTTGCTGGTGCCCACTGGATGGATAATCACTTCTGCTCAGCTCCACTGGAGCAGAACGCCCCTGTTCTGCTGGCTCTGCTGGGAATCTGGTATGTCAACTTCTTCCAGGCTGAGACTCATGCCTTGCTCCCCTACGACCAGTACATGCACCGCTTTGCAGCTTACTTCCAGCAGGGCGACATGGAGTCAAATGGAAAATATATCACCAAAAATGGCACGCGTGTGAACTACCACACTGGACCCATCGTATGGGGAGAACCAGGGACCAATGGACAGCATGCATTCTACCAGCTCATTCACCAAGGAACGCGTATGATTCCTGCTGACTTCCTCATTCCTGCACAGACTCAACATCCAATCAGAGATAATCTGCATCACAAGATACTGATGGCGAACTTCCTGGCTCAGACCGAGGCACTGATGAAGGGTAAGACTTCAGATGAGGCCAGAAAAGAGCTTGAGGCAGCTGGCAAGAGTGGAGAAGCTCTTGAGAAACTCCTTCCTCATAAAGTATTTGAAGGAAACAAGCCAAGCAACTCAATCATTTTCAAGAAACTCAGTCCTTTCATGCTGGGGGCACTGGTTGccATGTATGAGCACAAGATCTTTGTGCAAGGCGTAATGTGGAACATCAACAGCTATGACCAGTGGGGTGTGGAGCTGGGGAAACAGCTGGCTAAGAAGATTGAGCCTGAGCTGCAGGATGATTCTGAAGTCCATTCTCACGATTCTTCCACCAATGGGCTCATCAGCTTCTTCAAGAAAAACCGCGCTTGAATTACCTGATCCCTCTCCTTACTGCCTCACTTCTCTGATGGGAACAATGGATTACGTATTATGCCCCGACATAGTCCAGGCTTGGTAGGCCTAACTGAAGAGGAAGAGCACTTTACATATGTCACCATTTATTGTGTACTTGAGTGTCTTTGTGCATTGTGAGATTTGACTGTAAAAGTAGACCTAATAACCAGTAAGGGAATCCCCATTACTGTATGTGCTGCAAGTTCTGGAATGCTGTAACCCTTCTCAACACGTTTACCCTTTGCTTAGTCAACACTgactgaccaaaataaatgtCTAATTTGTCACCTAAAA

Function

symbol description
gpia Predicted to enable glucose-6-phosphate isomerase activity and monosaccharide binding activity. Predicted to be involved in gluconeogenesis; glucose 6-phosphate metabolic process; and glycolytic process. Predicted to be located in extracellular space. Predicted to be active in cytosol. Is expressed in several structures, including cardiovascular system; digestive system; musculature system; nervous system; and pleuroperitoneal region. Human ortholog(s) of this gene implicated in congenital hemolytic anemia; congenital nonspherocytic hemolytic anemia; intellectual disability; and neuromuscular disease. Orthologous to human GPI (glucose-6-phosphate isomerase).
gpi Enables glucose-6-phosphate isomerase activity and ubiquitin protein ligase binding activity. Involved in glucose 6-phosphate metabolic process; positive regulation of endothelial cell migration; and positive regulation of immunoglobulin production. Located in cytosol; nucleoplasm; and plasma membrane. Implicated in congenital hemolytic anemia; congenital nonspherocytic hemolytic anemia; intellectual disability; and neuromuscular disease. Biomarker of acute lymphoblastic leukemia and acute myeloid leukemia.

NR:

description
PREDICTED: glucose-6-phosphate isomerase-like

GO:

id name namespace
GO:0006094 gluconeogenesis biological_process
GO:0006096 glycolytic process biological_process
GO:0004347 glucose-6-phosphate isomerase activity molecular_function

KEGG:

id description
K01810 GPI, pgi; glucose-6-phosphate isomerase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007228187.3 True 2094 mRNA 0.48 17 14801718 14812498

Neighbor

gene id symbol gene type direction distance location
LOC103031607 LOC108274970,LOC108428766 coding upstream 4485 14788767 ~ 14797233 (+)
amfr amfr,LOC107566269,LOC107679970,LOC107752457,LOC107723982,LOC107659867,LOC107555700 coding upstream 14810 14776711 ~ 14786908 (+)
LOC103030248 NA coding upstream 26514 14757323 ~ 14775204 (+)
dus2 dus2,LOC105922392,LOC108229071 coding upstream 47188 14745268 ~ 14754530 (+)
LOC103027493 LOC108428780 coding upstream 164645 14627212 ~ 14637073 (+)
hsd17b2 NA coding downstream 2306 14814804 ~ 14823334 (+)
irx5 LOC108428750 coding downstream 262961 15075459 ~ 15081023 (+)
lrrk2 lrrk2 coding downstream 496031 15308529 ~ 15351344 (+)
LOC111193056 rsph3,LOC107580271 coding downstream 543237 15355735 ~ 15357894 (+)
LOC103041261 clpx,LOC108442679 coding downstream 550270 15362768 ~ 15380544 (+)
G73566 NA non-coding upstream 124924 14675873 ~ 14676794 (+)
G73532 NA non-coding upstream 154156 14646443 ~ 14647562 (+)
G73527 NA non-coding upstream 163165 14637947 ~ 14638553 (+)
G73529 LOC107551388,LOC107676462,LOC108428784,LOC107701063,LOC107754325 non-coding upstream 182394 14614418 ~ 14619324 (+)
G73514 dynlrb2,LOC103025073,LOC106573385 non-coding upstream 256205 14542198 ~ 14545513 (+)
G73598 NA non-coding downstream 31947 14844445 ~ 14844664 (+)
G73710 NA non-coding downstream 311374 15123872 ~ 15126987 (+)
LOC111193097 NA non-coding downstream 373751 15186249 ~ 15187955 (+)
G73715 NA non-coding downstream 376397 15188895 ~ 15189386 (+)
G73799 NA non-coding downstream 553145 15365643 ~ 15368383 (+)
G73533 NA other upstream 152167 14648829 ~ 14649551 (+)
LOC103043719 NA other upstream 1903787 12871484 ~ 12897931 (+)
LOC103022150 brsk2a,brsk2b,LOC107707552,LOC107675281,LOC107600443 other upstream 4174754 10272919 ~ 10626964 (+)
G72621 NA other upstream 4719578 10078579 ~ 10082140 (+)
LOC103043718 LOC103043718,LOC108442465 other upstream 4831676 9968506 ~ 9970042 (+)
rpgrip1l rpgrip1l other downstream 79036 14891534 ~ 14921003 (+)
svip svip other downstream 759804 15572302 ~ 15577533 (+)
G74169 NA other downstream 1474178 16286676 ~ 16288329 (+)
G74649 NA other downstream 3642353 18454851 ~ 18455197 (+)
LOC103029914 scamp5,scamp5a,LOC108436905,LOC103363822,LOC107395508,LOC107703195 other downstream 3658206 18470704 ~ 18479345 (+)

Expression


Co-expression Network