hsd17b2


Basic Information

Item Value
gene id hsd17b2
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 14814804 ~ 14823334 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007228193.3
CCATTCATTTGCCTGACTTTGGCTTTTTTGAGTTGTACtagataaacaaaaacaattcagttatttctttttttatttgtgtttagctCCAGGTAGGTTTACCTGAGGTGGCCCACTTCATTTTAGAAGAAGCAGACATtggaaaaaagagataaaagttaaaagTGTTCTGCAGAGAATGGAGGCAGGTGGAGGGGAAGCATGGCTGTGTCCGCTGTGTGTGCTGGTAATAGCCACCAATACCTTACTGCTCTTGCTGTGGGGTAGAGGAGGGAGCTGGGTGGCATGGTCAGTGGCATTGCTCGGGCTCACACTGTGCTGTATGGCCCCAGCTGGATGCCTGGTGTTGGCTTTGCTGAGTGTGTGCTACACTGTCTTTTACTTCACTTCAAGGAGAGAGGAGCATCTGCTGCCTGCACATAACAAATCAGTGCTGATTACAGGTTGTGATTCAGGGTTTGGCCACAGTCTTGCTAAGATTCTGGACAGTGCTGGAATAAAGGTATATGCTGGGGTGCTGAAGGAAAGTGGACCAGGAGCACAGGAGCTCAGGAGACTTTCATCTTCACAACTTACTGTCCTCCAACTGGACGTCACAGACACCAGCCAGATCTCTGCTGCCCTGCAGTTAATAAAGAGCCAGACAGGAGAGAGAGGTCTTTGGGGATTGGTAAACAATGCTGGAGTGATTGGATACCTGTGTGATGGGGAAATTCTTCCAATCAGAATACTTAGAAAAACCCTGGATGTCAATTTCATTGCCGGTGTGGAGATGACACAGACATTCCTGCCTTTGATACGACAATCTAAAGGGAGGATTGTGAACATATCCAGTCTGGCAGGGGAAGTTCCTTTTCCTGGTTTTGCTGCTTATGGATCATCTAAAGCAGCTGTGATTTCCTACTCCGGAGCTCTGAGACAAGAACTGTCCCAGTGGGGAGTGAGAGTGGCTGTTATTCAGCCTGGGGGTTTCAAGACTAACATTCTGGGCAATCAACAGGAATGGATTCAAGTTCAGAAGGAGATCCTTAGCAGTCTGCCCCAAGAAGTAAGAGAGGCATATGGGGACGAGTACATTTGCTCCCTGCAACAGCGTTTAAGCTCTATGAATACACAGGGCAGCACTGATGTTGGGCCCGTTGTGGAAGCTATAAAGCATGCACTGCTCTCAGAAACACCCAGAGCCTTCTATCATCCAGGACCAGCTGCCTGGTCTGTTCCATTCATCCACAGGTTCTGCCCAACCTGGCTATTTGATATcattttttcaaacatttttaagtattacagTGTTCCACCAGCTGGAGTGGCTTCTAAAAAATGAACAACACACAGCTTGAGCATACTGTTAAACTTTATCATGTGACctcattcattttaaagcaaTACACAAATGTTGTACAATATGAACAAAACTGTTCAAATATATGCACTTATACCACATAAATAATAA

Function

NR:

description
estradiol 17-beta-dehydrogenase 2 isoform X3

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0004303 estradiol 17-beta-dehydrogenase activity molecular_function
GO:0047035 testosterone dehydrogenase (NAD+) activity molecular_function

KEGG:

id description
K13368 HSD17B2; 17beta-estradiol 17-dehydrogenase / 3alpha(17beta)-hydroxysteroid dehydrogenase (NAD+)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007228193.3 True 1453 mRNA 0.45 6 14814804 14823334

Neighbor

gene id symbol gene type direction distance location
LOC103031298 gpia,gpi,LOC108428767,LOC108274969,LOC107679975 coding upstream 2306 14801718 ~ 14812498 (+)
LOC103031607 LOC108274970,LOC108428766 coding upstream 17571 14788767 ~ 14797233 (+)
amfr amfr,LOC107566269,LOC107679970,LOC107752457,LOC107723982,LOC107659867,LOC107555700 coding upstream 27896 14776711 ~ 14786908 (+)
LOC103030248 NA coding upstream 39600 14757323 ~ 14775204 (+)
dus2 dus2,LOC105922392,LOC108229071 coding upstream 60274 14745268 ~ 14754530 (+)
irx5 LOC108428750 coding downstream 252125 15075459 ~ 15081023 (+)
lrrk2 lrrk2 coding downstream 485195 15308529 ~ 15351344 (+)
LOC111193056 rsph3,LOC107580271 coding downstream 532401 15355735 ~ 15357894 (+)
LOC103041261 clpx,LOC108442679 coding downstream 539434 15362768 ~ 15380544 (+)
LOC103040017 LOC103040017,LOC108442681,LOC108274534,LOC105913127,LOC107695923,LOC107555711,LOC107723960,LOC107701590 coding downstream 580508 15403842 ~ 15418547 (+)
G73566 NA non-coding upstream 138010 14675873 ~ 14676794 (+)
G73532 NA non-coding upstream 167242 14646443 ~ 14647562 (+)
G73527 NA non-coding upstream 176251 14637947 ~ 14638553 (+)
G73529 LOC107551388,LOC107676462,LOC108428784,LOC107701063,LOC107754325 non-coding upstream 195480 14614418 ~ 14619324 (+)
G73514 dynlrb2,LOC103025073,LOC106573385 non-coding upstream 269291 14542198 ~ 14545513 (+)
G73598 NA non-coding downstream 21111 14844445 ~ 14844664 (+)
G73710 NA non-coding downstream 300538 15123872 ~ 15126987 (+)
LOC111193097 NA non-coding downstream 362915 15186249 ~ 15187955 (+)
G73715 NA non-coding downstream 365561 15188895 ~ 15189386 (+)
G73799 NA non-coding downstream 542309 15365643 ~ 15368383 (+)
G73533 NA other upstream 165253 14648829 ~ 14649551 (+)
LOC103043719 NA other upstream 1916873 12871484 ~ 12897931 (+)
LOC103022150 brsk2a,brsk2b,LOC107707552,LOC107675281,LOC107600443 other upstream 4187840 10272919 ~ 10626964 (+)
G72621 NA other upstream 4732664 10078579 ~ 10082140 (+)
LOC103043718 LOC103043718,LOC108442465 other upstream 4844762 9968506 ~ 9970042 (+)
rpgrip1l rpgrip1l other downstream 68200 14891534 ~ 14921003 (+)
svip svip other downstream 748968 15572302 ~ 15577533 (+)
G74169 NA other downstream 1463342 16286676 ~ 16288329 (+)
G74649 NA other downstream 3631517 18454851 ~ 18455197 (+)
LOC103029914 scamp5,scamp5a,LOC108436905,LOC103363822,LOC107395508,LOC107703195 other downstream 3647370 18470704 ~ 18479345 (+)

Expression


Co-expression Network