gas2 (gas2,LOC107677431,LOC107728426)


Basic Information

Item Value
gene id gas2
gene name gas2,LOC107677431,LOC107728426
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 15581036 ~ 15621857 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007228227.3
tcaGACCAGCCTCCCtctatcagcagcagcagcagcgccctGCTACCCACACTAttcagcacagagacagaaagagcgCGCGCCCTCACCCAGCACAGACACGCGGCGGCTCTGCCATGTCAGTGGGAGCCCCGCTGTCTGCTGTTAACGGGGGGAACCTGGAGCCAGAGCCCGGGAGAGCAGCATGAGCATAGAGAGCCGGAGACACGCACTGAGCCGGGCTGAGCTTTCTCACAGAGCCGGGCGGTCCGGAGGTCAGTAAAGAAGGAGCATCATGTGTAGCTCACTGAGCCCAAAGCAGCAGCCGGCTGGCCCCGGCTTGACTGACCTGCAGCAGTACAGCCAGTGGCTGGCCAGCAGACATGAGGCCAGCTTACTGCCTATGAAGGAGGACCTGGCGCTTTGGCTCACTAGCATGCTGGGTGTGGAGATCACAGCAGACAGCTTCATGGACAGGCTAGATAATGGTTTCCTGTTATGTCAGCTGGCTGAGACACTGCAGGAGAAATTCAGGCAAAGCAACGGGGAATTGTCGCCACCGGGCAAGccaaTCCCCAATCGGAGGATCCCATGTAGGGCAAGTGCTCCCTCCGGCTCTTTCTTTGCCCGGGATAACACTGCTAACTTCCTGTCATGGTGTCGAGAGGTGGGCGTTGGAGAAACCTGCTTGTTTGAATCTGAGGGGTTGGTTTTGCACAAACAGCCACGTGAGGTCTGCCTCTGTCTCTTGGAGCTGGGGAGGATAGCATCCAGGTTTAAGGTGGAGCCACCTGGGTTAATTAAGCTGGAGAAAGAGATTGAGCAGGAGGAGAAAGCTCCTGAGCCCCCTCCCTCCCCCGTCTCTCCTACCCAGGTTTCTTCCCCCAACAAATGCTCCTCCTGCAAGAAAAGCACTGGCAAGCTTCTGGATGATGCTGTAAAGCACATTGCTGAAGATCCTCCATGTAAATGTCCAAACAAGTTCTGCGTGGAGCGTCAGTCACAGGGCCGCTATCGTGTCGGGGAGAAGATACTCTTTATTCGGATGCTGCACAATAAGCACGTGATGGTGCGTGTGGGTGGAGGCTGGGAGACCTTTGAGAGCTACCTGCTGAAGCATGACCCGTGCCGTATGCTCCAGATCTCAAGGGTGGAGGGCAAGATCTCACCCATCTCCAACAAATCCCCCAGCATTAAAGACCTCACCCCCGATAGCTACCTGGTGGTAGCGGCACACTACAAAAGCAAGAAGTAAAGGGCAAAGGCAAAAGTGAAGACTATTTGATCAGGTGGACCTCCTCTCTGTAATGTATTTCACTGACATAcactcatcattaaaaaaaaagttgcacccagaaggaattaTTGGATTTTAATGCTATTCGGaagaaagatgaaaaaaaaaattatgattaaaaaagcaTTCAGAAGTAGTGGTGCATGTCTAGATAGACATATCAACATGGAGTTGTAGAATGTAGTATCagttagggctgcacgatactggaaacattttacattgaaaatgttcttttttgacaatatatatcatgatattaaacaaGGCAGGGCCAATGACGTCACCACCCCCACCCGCGCGCTGTCTCGCGTCCGGTTCGATCAAGTGCTGAGTCAGtgccgagcactcaaaaccagaggaaaacagcaaaacaacagtaatcggccctttaatcaggcttcttaaaaaaaaaaaaaaataaagtaaataagagCGTGTTTCTGGGATTAATAActtgaattcagctgtaactggaaatagctgtgcaaaactgttctggactgaggtgcacagctttcagcatgtgcgtttacaagcacttgcccaaccatgtggatggaggccatgcggttacctcgtaaCAGTAACTCAGTGACAGTCTGTTTCATTTCTGTTGTTtgatttattcacatttttttgatgatgagtgtatcaAACACAGCTGTTACCATGTCTTAAGAAACTTGAGAAGCAAtgtttctctgtttgtgtgtaattttacCAAAGAGCAAGACCCTCATCCTCAGAATATGGCCTTCCTCTGTGCATAGCTGGTGGTAGACATGATTTCTTGACTAGTCAAACAcaatctgtctttttttttattttttagatttttacttGCATTTGTGTATAAATACACAACATAGATTGTTATTATGGTTAGTGATAGCTtctagactgatttagatcattCGTCATATTGCATCCAAGCACAGAGGCTCTGAACTACAATACGTCTGATATTAAGAGCACTTTCACACCTGTAGCCTGAATCAGTTAAAGCAGTTATAAACTTAAAGTGCACCAAAATGCATGACAACAGACCATGTGAGTATTTtctctctgcttattggtcaAACCTAAAGTATCTGATTACTGTATCCACATTTGTtcccggaaaaaaaaaatcacaccagCAAACCATTTTGTTTTATCCAGACTAAACAaatgtgcaggtgtgaaaatgcactTAGAGAAGAGACTGGAATTCAAAAGTTTAAGATCGTTTCAGACTGTTTTagatatttgcattttattttcacATCTCAGAATACTATGCAATGATTTGTTGACGATCACTTCTAAACTGGTATAAACTGATATATTTAGTCTAgattatggtgtttttttttgttattattctaCTTGTCTATCAgcttgttttagtttgtttagctGAAATGTCTGTATAACTAATGCTTGAAGTTTGTCATCTCATCATGTTTTTGAATTCAGAACTGATTTGGTTCATTTCTTAATATCTCCCTTGATGGGTGtacatacatttacagtaaTTCCTGCATATTTAGCAATATCCATGatactgtttttatatattattaagggTATTATGAAGTCATAATATCAATACTATGCAATTTGTATTTTCTGGCAGTTGCTTATTTCCTAGCAGATGATTTTCTTATTTAGCTTGTACtgttttgtttgattatttgtaacatttgtaTAAGAAAGGAATGATGATGTAAAGTAAtgaccactctctctctctaattgcAAGGATAATCAAATATACAGTGTATGCTTTAAATAGAATTTAGCGTGTGCCTGATTTGGGGTAAATGTGTTAACTTAAACTTTTCTGTTCTCTGTATAATAAGGCCTGAGAATAAACGTTGGGAACTGATCTGAA
>XM_022672191.1
CAGTACAGCCAGTGGCTGGCCAGCAGACATGAGGCCAGCTTACTGCCTATGAAGGAGGACCTGGCGCTTTGGCTCACTAGCATGCTGGGTGTGGAGATCACAGCAGACAGCTTCATGGACAGGCTAGATAATGGTTTCCTGTTATGTCAGCTGGCTGAGACACTGCAGGAGAAATTCAGGCAAAGCAACGGGGAATTGTCGCCACCGGGCAAGccaaTCCCCAATCGGAGGATCCCATGTAGGGCAAGTGCTCCCTCCGGCTCTTTCTTTGCCCGGGATAACACTGCTAACTTCCTGTCATGGTGTCGAGAGGTGGGCGTTGGAGAAACCTGCTTGTTTGAATCTGAGGGGTTGGCTGAAGGCATGCGAGGAGATGACAGGAAATTCAGTTTTGCACAAACAGCCACGTGAGGTCTGCCTCTGTCTCTTGGAGCTGGGGAGGATAGCATCCAGGTTTAAGGTGGAGCCACCTGGGTTAATTAAGCTGGAGAAAGAGATTGAGCAGGAGGAGAAAGCTCCTGAGCCCCCTCCCTCCCCCGTCTCTCCTACCCAGGTTTCTTCCCCCAACAAATGCTCCTCCTGCAAGAAAAGCACTGGCAAGCTTCTGGATGATGCTGTAAAGCACATTGCTGAAGATCCTCCATGTAAATGTCCAAACAAGTTCTGCGTGGAGCGTCAGTCACAGGGCCGCTATCGTGTCGGGGAGAAGATACTCTTTATTCGGATGCTGCACAATAAGCACGTGATGGTGCGTGTGGGTGGAGGCTGGGAGACCTTTGAGAGCTACCTGCTGAAGCATGACCCGTGCCGTATGCTCCAGATCTCAAGGGTGGAGGGCAAGATCTCACCCATCTCCAACAAATCCCCCAGCATTAAAGACCTCACCCCCGATAGCTACCTGGTGGTAGCGGCACACTACAAAAGCAAGAAGTAAAGGGCAAAGGCAAAAGTGAAGACTATTTGATCAGGTGGACCTCCTCTCTGTAATGTATTTCACTGACATAcactcatcattaaaaaaaaagttgcacccagaaggaattaTTGGATTTTAATGCTATTCGGaagaaagatgaaaaaaaaaattatgattaaaaaagcaTTCAGAAGTAGTGGTGCATGTCTAGATAGACATATCAACATGGAGTTGTAGAATGTAGTATCagttagggctgcacgatactggaaacattttacattgaaaatgttcttttttgacaatatatatcatgatattaaacaaGGCAGGGCCAATGACGTCACCACCCCCACCCGCGCGCTGTCTCGCGTCCGGTTCGATCAAGTGCTGAGTCAGtgccgagcactcaaaaccagaggaaaacagcaaaacaacagtaatcggccctttaatcaggcttcttaaaaaaaaaaaaaaataaagtaaataagagCGTGTTTCTGGGATTAATAActtgaattcagctgtaactggaaatagctgtgcaaaactgttctggactgaggtgcacagctttcagcatgtgcgtttacaagcacttgcccaaccatgtggatggaggccatgcggttacctcgtaaCAGTAACTCAGTGACAGTCTGTTTCATTTCTGTTGTTtgatttattcacatttttttgatgatgagtgtatcaAACACAGCTGTTACCATGTCTTAAGAAACTTGAGAAGCAAtgtttctctgtttgtgtgtaattttacCAAAGAGCAAGACCCTCATCCTCAGAATATGGCCTTCCTCTGTGCATAGCTGGTGGTAGACATGATTTCTTGACTAGTCAAACAcaatctgtctttttttttattttttagatttttacttGCATTTGTGTATAAATACACAACATAGATTGTTATTATGGTTAGTGATAGCTtctagactgatttagatcattCGTCATATTGCATCCAAGCACAGAGGCTCTGAACTACAATACGTCTGATATTAAGAGCACTTTCACACCTGTAGCCTGAATCAGTTAAAGCAGTTATAAACTTAAAGTGCACCAAAATGCATGACAACAGACCATGTGAGTATTTtctctctgcttattggtcaAACCTAAAGTATCTGATTACTGTATCCACATTTGTtcccggaaaaaaaaaatcacaccagCAAACCATTTTGTTTTATCCAGACTAAACAaatgtgcaggtgtgaaaatgcactTAGAGAAGAGACTGGAATTCAAAAGTTTAAGATCGTTTCAGACTGTTTTagatatttgcattttattttcacATCTCAGAATACTATGCAATGATTTGTTGACGATCACTTCTAAACTGGTATAAACTGATATATTTAGTCTAgattatggtgtttttttttgttattattctaCTTGTCTATCAgcttgttttagtttgtttagctGAAATGTCTGTATAACTAATGCTTGAAGTTTGTCATCTCATCATGTTTTTGAATTCAGAACTGATTTGGTTCATTTCTTAATATCTCCCTTGATGGGTGtacatacatttacagtaaTTCCTGCATATTTAGCAATATCCATGatactgtttttatatattattaagggTATTATGAAGTCATAATATCAATACTATGCAATTTGTATTTTCTGGCAGTTGCTTATTTCCTAGCAGATGATTTTCTTATTTAGCTTGTACtgttttgtttgattatttgtaacatttgtaTAAGAAAGGAATGATGATGTAAAGTAAtgaccactctctctctctaattgcAAGGATAATCAAATATACAGTGTATGCTTTAAATAGAATTTAGCGTGTGCCTGATTTGGGGTAAATGTGTTAACTTAAACTTTTCTGTTCTCTGTATAATAAGGCCTGAGAATAAACGTTGGGAACTGATCTGAA

Function

symbol description
gas2 Predicted to enable actin filament binding activity and cytoskeletal anchor activity. Predicted to be involved in actin crosslink formation. Predicted to act upstream of or within several processes, including ovarian follicle development; ovulation; and regulation of Notch signaling pathway. Predicted to be located in cytosol. Predicted to be active in actin filament.

NR:

description
PREDICTED: growth arrest-specific protein 2

GO:

id name namespace
GO:0007050 cell cycle arrest biological_process

KEGG:

id description
K24627 GAS2, GAS2L; growth arrest-specific protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007228227.3 True 3155 mRNA 0.43 8 15581036 15621857
XM_022672191.1 False 2855 mRNA 0.41 8 15581036 15613016

Neighbor

gene id symbol gene type direction distance location
LOC103042382 LOC108442690 coding downstream 9496 15563971 ~ 15571540 (-)
ano3 ano3,LOC107677449 coding downstream 37256 15460687 ~ 15543780 (-)
fibin LOC108442682 coding downstream 147011 15431473 ~ 15434025 (-)
LOC103038669 kif21a coding downstream 290324 15228039 ~ 15290712 (-)
LOC103035545 LOC108428749,LOC105908727 coding downstream 506267 15001175 ~ 15074769 (-)
LOC111193057 NA coding upstream 124 15621981 ~ 15624917 (-)
slc17a6 slc17a6,slc17a6a,LOC107555703,LOC107570095,LOC107677426 coding upstream 23222 15645079 ~ 15660833 (-)
LOC103041761 NA coding upstream 40145 15662002 ~ 15663287 (-)
ano5 ano5 coding upstream 44492 15666349 ~ 15710606 (-)
ccdc33 ccdc33 coding upstream 217829 15839686 ~ 15856661 (-)
G73877 svip non-coding downstream 3538 15572334 ~ 15577498 (-)
G73870 NA non-coding downstream 52574 15448674 ~ 15528462 (-)
G73869 NA non-coding downstream 126426 15449504 ~ 15454610 (-)
G73862 NA non-coding downstream 149729 15430147 ~ 15431307 (-)
LOC111193098 NA non-coding downstream 262949 15314637 ~ 15318087 (-)
G73910 NA non-coding upstream 21964 15643821 ~ 15644252 (-)
LOC111193099 NA non-coding upstream 231445 15853302 ~ 15953813 (-)
G74091 usp3,LOC107659494 non-coding upstream 481759 16103616 ~ 16108725 (-)
G74199 NA non-coding upstream 580667 16202524 ~ 16215525 (-)
G74202 LOC108433646 non-coding upstream 597239 16219096 ~ 16222273 (-)
LOC103040324 NA other downstream 166423 15381329 ~ 15414613 (-)
LOC103037068 cpne8,LOC108274474,LOC107679956,LOC107752477,LOC107723993,LOC105026415,LOC106561599,LOC105028206 other downstream 366752 15123814 ~ 15214284 (-)
hbp1 hbp1,LOC107732286,LOC107701066 other downstream 783753 14709058 ~ 14797283 (-)
LOC103025073 dynlrb2,LOC103025073,LOC106573385 other downstream 1035500 14542196 ~ 14545536 (-)
G73172 NA other downstream 2959680 12610834 ~ 12621356 (-)
LOC103046265 pkp3 other upstream 136446 15758303 ~ 15780678 (-)
LOC103041134 rps27l,zgc:136826,LOC107752326,LOC107598918,LOC101156845 other upstream 845232 16467089 ~ 16470323 (-)
nrg4 NA other upstream 2255169 17877026 ~ 17885395 (-)
G74591 isl2,LOC105022634 other upstream 2360890 17982747 ~ 18029747 (-)
G74791 NA other upstream 3317317 18939174 ~ 18940464 (-)

Expression


Co-expression Network