LOC103044315 (ano9,LOC108442698)


Basic Information

Item Value
gene id LOC103044315
gene name ano9,LOC108442698
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 15717065 ~ 15738062 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007228230.3
AAGTAGTTAACAGTAGTGAACAATGCCCTGAGTGTTTCCTTTCcagaagagataaaaaaaacctgCACCGGTTAGACCAACCCGCACATCCTTCAGCTTCAGAAACCTGAGGAGTGACAAATCACAGCAAGTCAACCAGTGACATTCCAGCCCcgagagcagcagcagaaaccaGCTGCATTACGCCCGAGTTCCTCCTGCCATGGCGGAAGTAGGGAGTTATATAGGGGACAGTGCTGCTGAGGGCTGGACTCAGTGCCCAGGCTCGAGACAGAGGCTCTCCCTCAGAGGAGATGGAGTGACCCGGCTCGAGCGGCCAGTCTCCTTACCTCTGCTGGAGGTTCCCTCAGAGATGGCACCACAGAAGCTTACCAAGAGAACGGGGAGCATTGAGCTATTGGAGGCTATTGGAGTCGTGAAAAAGGATAATGGTACCGGGAGCTTTTCTCTGCTGCCTGGGGCCCCTCAGTCCTTTGACTATGTTCTAGTAGCCCAGAAAAACGAGGATGGAGATCACGAGAGCTTCAAGAAGCAGAGAGACTTTATCAACGCTCTGAaggacaaaaaactaaaaataacgAAAATTGTTGACGAGGACAGAGTTTTTTATGGAATTACTGCGCCAAATGAGACCTTTGAGACGTACACATATCTGCTCAAAGTGTCTGATGCCTGTAATTGGAGCTGTGAGGAGCAGGGAAAAGTACCACAGTCCACCAGGATACGGATAGTTGAGTTCATTGTGGATCACACCTTCATAGAATCTTCCCATTGTGGCGCAGAGTATCTGTCAGACCTTATCAAGAAGAATGTTTTTGAGGCTCAGTTTTGTCTGCACGAGaaacaagaacaaaaagaaCTGAAAAACAGTTGGGCTCGATGGACGGCTTGTTTTAATGGTCAGCCAATAACTGATGTAAGAACCTACTTTGGGGAGAAGGTGGCTCTGTATTTCTTGTGGCTGGGATGGTACACATTTCTGTTGATCCCTGCTGCCCTGGTTGGGGTCATAGTCTTCCTTTATGGCCTGGCCTTCTTCAAAACCAGCCCACTCATAAAAGAAGTGTGTCAGTCAAATATTGTCATGTGCCCGCTGTGTGACGAGAAATGCAAGGTCTGGCAGCTTTCTGACACCTGCATATATGCAAAGTTGAGTATCCTGTTTGACAATGAGGGAACAGTCGCATTTGCCATGTTTATGGCAGTCTGGGCTACTGTCTTTCTAGAGTTCTGGAAACGCCACAGAGCATCATATGTCTCTGAATGGAAAGTTTTTGATTGGTGTGAAGAAGAGgaggaGCTGATTCTTCAGATTGTGAACGATGCCGATTGTGAATCCAAGAAGTACAGGCACTCCTACCTTCGTAGTACACTAGTGATGATTTTAGTGACACTTATGTTGCTGCTCATCATTGGCCTTGCGCATGCTCTGGTGGTGTTCAGAGTAATTGCCAGTGTGCTGTTTGCCAAGCCCACTAACTGGGCATTCCTGAGGGAAAACTCCAGTACAGTGGCTTTCTTGATGGGAGCTGTGCTGCATTACCTCACAATAACCATCATGACTCGGGTCAATCGCACAGTTGCTATGAAGCTTTGTGAACTAGaGAAAGTTCGCTCCCATGCAGCTGTTGAAAGAAGCTTCACAGTGAAgatgtttgtttttcagttcTTCACTCTGTTCTCCTCGCTCATATACACAGCCTTCTTTCTTGGCAGGATAAACGGACACCCTGGTGGATATGTGCGTATTGCTGGCATCTGGAGGTTGGAGGAGTGTCACCCTAGTGGATGTCTGACAGACCTGTTCATTCAGATGGCCGTCATCCTCATTCTCAAACAGACTATCAATAACGTGGTTGAGATCGCTGGCCCCTGGTTTACACGCTGGCGGAAGAGGCTGCGGAGTCGGAAGCTGAGGCAAAAGGTCCGACAGTGTTCGAAGAGGGACTGTATGGAGAGCACGCCAGGAGCTGAACTGTGTGACAACTGTAAAGTGAAGGACCTTCTGAGGAATTTTGATCTGGAAAATGTGGACCACTTCAGCCTCTTCAATGAGTTCCTGGAAATGGTGCTACAGTTCAGTTTCACCACCATCTTTGTGGCAGCATTTCCTCTGGCCCCTCTGCTTGCTCTGCTCAACAACATCATCGAGATCAGGCTGGATGCTATTAAGATGGTCAGCCTGGAGCGCAGACTCATACCCAGGAAGACTAATGACATCGgtaTTTGGACAGATGTGCTGGAAACGATTGGGGTGCTAGCAGTCATCGCTAATGGGCTGGTCATTGGGATATCCTCTGATTTTATCCCTCGTCTGGTTTATCGTTACCGCTATGGTCCCTGTGCCAACTCTGATGCTTCTGATATTGACTGTATGTCAGGATATATCAATAACTCTCTGTCCACTGCAAACATCAGTGATAAAAACATCAAGAGAGACTTTCTCCCTGCCCAGGTTATTTTATCTAATGGCAATAATGTGACATACTGCAGCTATAGAGATTATAGGAGTAATGAGGACCAAAGTTTGACCAATCAATTTTGGGTAATTCAGGCAGTCCGCTTTGCTTTTGTCGTCCTTTTTGAGCATGTTGTGGTTATGTTTAAGTTCATAGCAGGGTGGTTTGTGCCTGGTTCTCCTCTGGAGGTGAGAAATAACAGGCTGCAAGACAAACTCAACAGACTGAAGGAAGAACTGAGAGCTGAACGAAAAAGacataaagaaaaatcacaGGATAAATGACCAAGGCATCAAAAGGAAGGCCAAAATGGACACACACAAAACTGTTGTACAGTGTGTCAGCATGAGATCTGACCACTCAAATGCTTGTTTTTAGAAACTCTGGTCAGGTTTCTACAGTTCTGTAAAAAAGGCTTGAAGCAGAATGACTATCTATTGTGCACAACTGCAAACCTGCTGAATGTTTAAGTATGCACAATTTCATGCACTTTCTATAGATCTATTTTTACAACTGGAAAAAATGTCTGCTTTAGACCAAACCTGTGACCTTTTATTTTGTGTCCTAAACAcctatgtatatttttgtactgtaaattgaagattgtgttttagtgtgttttagttGCATTAATTTTGTTGCTTGTTTATACTTATTTACtggataaatacagtatataaatacatatattttatacttatttaaaaaaagaaatatcttGACTATGATAGAAATATGACCTGTTTTTTGCAAGCCTGAttgggtttttaataaaatctaaGTAACTAAATCTAA
>XM_022672192.1
AAGTAGTTAACAGTAGTGAACAATGCCCTGAGTGTTTCCTTTCcagaagagataaaaaaaacctgCACCGGTTAGACCAACCCGCACATCCTTCAGCTTCAGAAACCTGAGGAGTGACAAATCACAGCAAGTCAACCAGTGACATTCCAGCCCcgagagcagcagcagaaaccaGCTGCATTACGCCCGAGTTCCTCCTGCCATGGCGGAAGTAGGGAGTTATATAGGGGACAGTGCTGCTGAGGGCTGGACTCAGTGCCCAGGCTCGAGACAGAGGCTCTCCCTCAGAGGAGATGGAGTGACCCGGCTCGAGCGGCCAGTCTCCTTACCTCTGCTGGAGGTTCCCTCAGAGATGGCACCACAGAAGCTTACCAAGAGAACGGCCCCTCAGTCCTTTGACTATGTTCTAGTAGCCCAGAAAAACGAGGATGGAGATCACGAGAGCTTCAAGAAGCAGAGAGACTTTATCAACGCTCTGAaggacaaaaaactaaaaataacgAAAATTGTTGACGAGGACAGAGTTTTTTATGGAATTACTGCGCCAAATGAGACCTTTGAGACGTACACATATCTGCTCAAAGTGTCTGATGCCTGTAATTGGAGCTGTGAGGAGCAGGGAAAAGTACCACAGTCCACCAGGATACGGATAGTTGAGTTCATTGTGGATCACACCTTCATAGAATCTTCCCATTGTGGCGCAGAGTATCTGTCAGACCTTATCAAGAAGAATGTTTTTGAGGCTCAGTTTTGTCTGCACGAGaaacaagaacaaaaagaaCTGAAAAACAGTTGGGCTCGATGGACGGCTTGTTTTAATGGTCAGCCAATAACTGATGTAAGAACCTACTTTGGGGAGAAGGTGGCTCTGTATTTCTTGTGGCTGGGATGGTACACATTTCTGTTGATCCCTGCTGCCCTGGTTGGGGTCATAGTCTTCCTTTATGGCCTGGCCTTCTTCAAAACCAGCCCACTCATAAAAGAAGTGTGTCAGTCAAATATTGTCATGTGCCCGCTGTGTGACGAGAAATGCAAGGTCTGGCAGCTTTCTGACACCTGCATATATGCAAAGTTGAGTATCCTGTTTGACAATGAGGGAACAGTCGCATTTGCCATGTTTATGGCAGTCTGGGCTACTGTCTTTCTAGAGTTCTGGAAACGCCACAGAGCATCATATGTCTCTGAATGGAAAGTTTTTGATTGGTGTGAAGAAGAGgaggaGCTGATTCTTCAGATTGTGAACGATGCCGATTGTGAATCCAAGAAGTACAGGCACTCCTACCTTCGTAGTACACTAGTGATGATTTTAGTGACACTTATGTTGCTGCTCATCATTGGCCTTGCGCATGCTCTGGTGGTGTTCAGAGTAATTGCCAGTGTGCTGTTTGCCAAGCCCACTAACTGGGCATTCCTGAGGGAAAACTCCAGTACAGTGGCTTTCTTGATGGGAGCTGTGCTGCATTACCTCACAATAACCATCATGACTCGGGTCAATCGCACAGTTGCTATGAAGCTTTGTGAACTAGaGAAAGTTCGCTCCCATGCAGCTGTTGAAAGAAGCTTCACAGTGAAgatgtttgtttttcagttcTTCACTCTGTTCTCCTCGCTCATATACACAGCCTTCTTTCTTGGCAGGATAAACGGACACCCTGGTGGATATGTGCGTATTGCTGGCATCTGGAGGTTGGAGGAGTGTCACCCTAGTGGATGTCTGACAGACCTGTTCATTCAGATGGCCGTCATCCTCATTCTCAAACAGACTATCAATAACGTGGTTGAGATCGCTGGCCCCTGGTTTACACGCTGGCGGAAGAGGCTGCGGAGTCGGAAGCTGAGGCAAAAGGTCCGACAGTGTTCGAAGAGGGACTGTATGGAGAGCACGCCAGGAGCTGAACTGTGTGACAACTGTAAAGTGAAGGACCTTCTGAGGAATTTTGATCTGGAAAATGTGGACCACTTCAGCCTCTTCAATGAGTTCCTGGAAATGGTGCTACAGTTCAGTTTCACCACCATCTTTGTGGCAGCATTTCCTCTGGCCCCTCTGCTTGCTCTGCTCAACAACATCATCGAGATCAGGCTGGATGCTATTAAGATGGTCAGCCTGGAGCGCAGACTCATACCCAGGAAGACTAATGACATCGgtaTTTGGACAGATGTGCTGGAAACGATTGGGGTGCTAGCAGTCATCGCTAATGGGCTGGTCATTGGGATATCCTCTGATTTTATCCCTCGTCTGGTTTATCGTTACCGCTATGGTCCCTGTGCCAACTCTGATGCTTCTGATATTGACTGTATGTCAGGATATATCAATAACTCTCTGTCCACTGCAAACATCAGTGATAAAAACATCAAGAGAGACTTTCTCCCTGCCCAGGTTATTTTATCTAATGGCAATAATGTGACATACTGCAGCTATAGAGATTATAGGAGTAATGAGGACCAAAGTTTGACCAATCAATTTTGGGTAATTCAGGCAGTCCGCTTTGCTTTTGTCGTCCTTTTTGAGCATGTTGTGGTTATGTTTAAGTTCATAGCAGGGTGGTTTGTGCCTGGTTCTCCTCTGGAGGTGAGAAATAACAGGCTGCAAGACAAACTCAACAGACTGAAGGAAGAACTGAGAGCTGAACGAAAAAGacataaagaaaaatcacaGGATAAATGACCAAGGCATCAAAAGGAAGGCCAAAATGGACACACACAAAACTGTTGTACAGTGTGTCAGCATGAGATCTGACCACTCAAATGCTTGTTTTTAGAAACTCTGGTCAGGTTTCTACAGTTCTGTAAAAAAGGCTTGAAGCAGAATGACTATCTATTGTGCACAACTGCAAACCTGCTGAATGTTTAAGTATGCACAATTTCATGCACTTTCTATAGATCTATTTTTACAACTGGAAAAAATGTCTGCTTTAGACCAAACCTGTGACCTTTTATTTTGTGTCCTAAACAcctatgtatatttttgtactgtaaattgaagattgtgttttagtgtgttttagttGCATTAATTTTGTTGCTTGTTTATACTTATTTACtggataaatacagtatataaatacatatattttatacttatttaaaaaaagaaatatcttGACTATGATAGAAATATGACCTGTTTTTTGCAAGCCTGAttgggtttttaataaaatctaaGTAACTAAATCTAA

Function

symbol description
ano9 Enables intracellular calcium activated chloride channel activity. Involved in chloride transport and negative regulation of intracellular calcium activated chloride channel activity. Located in plasma membrane.

NR:

description
PREDICTED: anoctamin-9-like

GO: NA

KEGG:

id description
K19503 ANO9, TMEM16J; anoctamin-9

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007228230.3 True 3254 mRNA 0.44 24 15717065 15738062
XM_022672192.1 False 3176 mRNA 0.44 23 15717065 15738062

Neighbor

gene id symbol gene type direction distance location
fancf NA coding upstream 89357 15624828 ~ 15627708 (+)
slc5a12 slc5a12 coding upstream 267195 15436399 ~ 15449870 (+)
LOC103040017 LOC103040017,LOC108442681,LOC108274534,LOC105913127,LOC107695923,LOC107555711,LOC107723960,LOC107701590 coding upstream 298518 15403842 ~ 15418547 (+)
LOC103041261 clpx,LOC108442679 coding upstream 336521 15362768 ~ 15380544 (+)
LOC111193056 rsph3,LOC107580271 coding upstream 359171 15355735 ~ 15357894 (+)
sigirr sigirr coding downstream 1500 15739562 ~ 15755106 (+)
LOC103046771 LOC103046771,LOC108442701 coding downstream 47891 15785953 ~ 15798451 (+)
nr2e3 nr2e3,LOC107595245,LOC105892475,LOC107589312 coding downstream 72347 15810409 ~ 15814622 (+)
stoml1 stoml1 coding downstream 83331 15821393 ~ 15828549 (+)
LOC103021835 cyp11a,LOC108442685,LOC106561846,LOC105007422,LOC107703186,LOC107751280 coding downstream 93395 15831457 ~ 15839847 (+)
G73891 NA non-coding upstream 47296 15666348 ~ 15669769 (+)
G73832 NA non-coding upstream 87887 15571269 ~ 15629178 (+)
G73819 NA non-coding upstream 259208 15454935 ~ 15457857 (+)
G73817 NA non-coding upstream 287420 15428748 ~ 15429645 (+)
G73801 NA non-coding upstream 331941 15384855 ~ 15385124 (+)
G73941 pkp3,LOC107589311 non-coding downstream 26478 15764540 ~ 15765125 (+)
G73970 NA non-coding downstream 157657 15895719 ~ 15896522 (+)
G73975 NA non-coding downstream 255107 15993169 ~ 15993836 (+)
G73990 man2c1,LOC107752311 non-coding downstream 312647 16050709 ~ 16051543 (+)
LOC103025699 NA non-coding downstream 396422 16134484 ~ 16147862 (+)
svip svip other upstream 139532 15572302 ~ 15577533 (+)
rpgrip1l rpgrip1l other upstream 796062 14891534 ~ 14921003 (+)
G73533 NA other upstream 1067514 14648829 ~ 14649551 (+)
LOC103043719 NA other upstream 2819134 12871484 ~ 12897931 (+)
LOC103022150 brsk2a,brsk2b,LOC107707552,LOC107675281,LOC107600443 other upstream 5090101 10272919 ~ 10626964 (+)
G74169 NA other downstream 548614 16286676 ~ 16288329 (+)
G74649 NA other downstream 2716789 18454851 ~ 18455197 (+)
LOC103029914 scamp5,scamp5a,LOC108436905,LOC103363822,LOC107395508,LOC107703195 other downstream 2732642 18470704 ~ 18479345 (+)
G74832 NA other downstream 3344754 19082816 ~ 19085556 (+)
cadps2 NA other downstream 3402087 19140149 ~ 19322775 (+)

Expression


Co-expression Network