CI01000009_05522736_05523662


Basic Information

Item Value
gene id CI01000009_05522736_05523662
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 5522736 ~ 5523662 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000009_05522736_05523662.mRNA
TTCAGCGTGGCGTTGATGTGTCATTGCGATGTGAGGTCTCTTTCCTGTCTGAATCCTCAACATTGCAGTGGGAGAAAGACGGACAACAAACATCCAACACCACTCTACTGTACAACAACTCTGCCTACATCATCTTACACACCGTTGATGAACACAATAAAGGGGAATATTACTGTAGATTGATGGAAGATGGAAGAGTAAAAACTGTTAGGAATTACACGCTTACTGTCAGTTCAAATTCATGCAATAGAAATAATACAATTTACAGACAAAGCTCTAATAATAGTGACGTATTACTGGTCTGCAAGTCTGTCAAGAAGTACGAGAGATGGAAATGGACCTGGGAGCCGAGGCCTGATTCACAGATCATTGATCTGATAGCAGTTGAAAAAGGAAGAGAAGTTCTAGTAAAAGGACCAATTAAACCAGGAAGACTTTCTTCAACCACTTACAATGATCAACTTTTTATCTTTCACATCTCACCTGTGAACTTTAATTATAGTGGGACATACAGGTGTATTACAAATGATCAAAAGATTCCCTACACAACCACAATTCTACACACCATCAGAGTCTCAGTGGAGCCCCCTGATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000009_05522736_05523662.mRNA False 594 mRNA 0.40 3 5522736 5523662

Neighbor

gene id symbol gene type direction distance location
CI01000009_05502414_05506275 NA coding upstream 16461 5499971 ~ 5506275 (+)
CI01000009_05491807_05498189 TFCP2L1 coding upstream 23937 5491807 ~ 5498799 (+)
CI01000009_05418094_05487944 CLASP1, CLASP1A coding upstream 34235 5417979 ~ 5488501 (+)
CI01000009_05411199_05413237 NIFK coding upstream 109063 5411199 ~ 5413673 (+)
CI01000009_05384160_05398034 CACNB4A, CACNB4 coding upstream 124699 5384160 ~ 5398037 (+)
CI01000009_05523743_05526184 NA coding downstream 81 5523642 ~ 5526249 (+)
CI01000009_05538212_05539688 NA coding downstream 14550 5538212 ~ 5539727 (+)
CI01000009_05685508_05688628 NA coding downstream 161846 5685508 ~ 5688633 (+)
CI01000009_05696405_05703318 NA coding downstream 172009 5695671 ~ 5703921 (+)
CI01000009_05704310_05721474 KLF7, KLF7A, KLF7B coding downstream 180331 5703993 ~ 5722006 (+)
G53383 NA non-coding upstream 113063 5409457 ~ 5409673 (+)
G53382 NA non-coding upstream 113972 5408444 ~ 5408764 (+)
G53338 NA non-coding upstream 120508 5399593 ~ 5402228 (+)
G53352 NA non-coding upstream 154786 5365850 ~ 5367950 (+)
G53257 NA non-coding upstream 477796 5044705 ~ 5044940 (+)
G53396 NA non-coding downstream 31108 5554770 ~ 5554990 (+)
G53402 NA non-coding downstream 49972 5573634 ~ 5573866 (+)
G53584 NA non-coding downstream 58795 5582457 ~ 5582685 (+)
G53632 NA non-coding downstream 218590 5742252 ~ 5742466 (+)
G53637 NA non-coding downstream 222913 5746575 ~ 5746951 (+)
CI01000009_03202999_03207060 MPC2, MPC2.S other upstream 2313752 3202207 ~ 3208984 (+)
G51529 NA other upstream 2460149 3062033 ~ 3062587 (+)
G51274 NA other upstream 3172250 2255099 ~ 2350486 (+)
CI01000009_01897343_01919208 PIKFYVE other upstream 3621310 1897343 ~ 1919516 (+)
G51122 NA other upstream 3840770 1680146 ~ 1681966 (+)
CI01000009_05931829_05943829 KCNH3 other downstream 336640 5931718 ~ 5943899 (+)
G53651 NA other downstream 721902 6245564 ~ 6248392 (+)
G56100 NA other downstream 3605638 9129300 ~ 9130286 (+)
CI01000009_09853929_09854476 SAP18 other downstream 4329697 9853929 ~ 9856587 (+)
CI01000009_11761868_11765848 ORMDL1.S, ORMDL1 other downstream 6237124 11761606 ~ 11766944 (+)

Expression


Co-expression Network