sema7a


Basic Information

Item Value
gene id sema7a
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 16014365 ~ 16026901 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007228248.3
ctaaCGGAGAGCTAGCTTCAGTAGaggcagaggaagagagagagaggacacatTGGGACTGTGTGGAGACATGACAGCCGCTGAGGAACGAATTAAACTCTCCTACCGAGCTCTTTTATATGAGTTCTTattatttctgtctgtttttggtTCGAGGGAGATTCCCAGATTAACACTGCATCAAGGCCAACAAATTCTCTACAGCAGAAATTTAAGTCACACAGTCTTCTTACTTCAGAAGGCAGAAGACCGCCTGTTTATAGGGGGATCAAACTATGTGTTAGAAGTTGATGTGAACAGTGGTCGACTAGTAAagAACTTCACACTCACGGATAACAGAGACTCTGTTTGTGATCAGAGTTCTTGTGAAAATACAGTCACAGTAATCGAagatttccagagctgtattttagtgtgtgggacaaatggagaaaacccaaaatgttgGAAATTGTATCCTACGGGGAGTAATCACtccagtgaggtagagcaatacATTGATGGCACTGGGATTTCTCCTTTCACACCTTTACAGAATTCTGTGTCTCTCGAAGCAGATGGGGACCTTTATGCAGCAGCCCCTCTTTATAAAGATGGAACTTCACTACAGTTCCGCAGAAAAGCTGGAAGACAAAACAGTGTATGGATGTATGATCCATGGATTACAGAACCAACCTTCATCTCTTCCTTCCTGGCCAGGAGACGAAATGAATCAATACATGAGAAGATTTATGTCTTTTTTCGAGAGAAAAACCCAGACAGTGGCCCAGAGGCAGACCCTTGGATCTCTAGAGTGGCTAGAGTTTGCAAGGGAGATAAAGGTGGCTCCAAAAGATTCTTCCAGAACATCTGGACGTCCTTCTTGAAAGCACGTCTTGTCTGTGCTATTCCTAGTGAGTCTCTTTACTTCAATCGTCTTCAGGATGTTTTTGTTGTGGAGTCTGAGGACTGGAGGGACTCCAGGGTGTATGCCCTCTTTTCAAGCAGCTGGAACTCCACTGCTGTTTGCATATATTCATTAGCTGAGCTTGATGGCATTTTCGAGAATTCCAAGTTCAAAGGCTACAATGATGAGATTCCAAGCCCAAGGCCAGGAACTtgcgTGGAGGACAGTAGATCTCTGCCTACACATTCTATCAACATCATTAAACATCATCCGGAGATGACTGATTGGATTCACCccatacagaaacacactccCTTCTTCAGAAGCAATAACAATTACACAAAAATAGTAGTGGACAGAGTTCAGGCTGCTGATGAGCAGATGTATAATGTGCTGCTGCTCTCTACGGACACTGGTGTGATCCTTAAGATTTTGGAGGAGAACTCCAATGCCTTTATCATATCTGAAACAATTCTTCTCAATGGCTCTGCTCCTGTGCAGTCAATGAAACTCGACTCTGAAAAGAGAAAGCTGTTTGTCGGATACCCTGGACAGATGTCTGTCTTAGACCTGCAGAGATGCCAGGATTACAAAGCCTCCTGTGAGGATTGTGTTCTTGCCCATTACCCGTACTGTGCATGGACTGAAAACGGCTGCACCTCACAAATtGGGGGAATTCAAAACCTTGCTACTGGTGATACCCTAGTTTGCCGTACAAATtcagtaaacaAAGGTGGAAGAACCAAGCGAGGTACATCATTCTTAACAGCAGCACCACAACCAATAGAACGCATTGTTCCCAAAGGAGTCCCGTACTACCTGTCCTGCCCCATCGAATCCCATCATGCTGCCTACAGCTGGGAGCACAGGAATTTTCACAGCCCTTGCCAACAGACACAGTCCATCTGCCTCCATCTCATACCATCTATCAGTGCAGACGACCATGGAGAGTACACCTGTATGTCCAAAGAGCGGGACTACACGAAAGTGGTTACAAAATACAATCTGCGTGGTCGCCCTGAGCCGAGAACCTTAAGCGGTGGCTGCAAACAGACAGCGCAAAAGGAGTGGCTATTGATTGTATCTGCTGCAGTTCTGTTCTGCATTCACCAGCAAGTCTAGAGTTGTAGGTGTGCTGCACTTTTATTAAGCTTTCCTAATTCTCAGCCTGTCTAGTAAAACCATTCCAGCAGAATGTGAATGCGTTTGATTTACATGCCTGTAACAGGACAGGACCACATTAAATGATTGATGTGTGGACTCTG

Function

NR:

description
semaphorin-7A-like

GO: NA

KEGG:

id description
K06529 SEMA7, CD108; semaphorin 7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007228248.3 True 2151 mRNA 0.45 14 16014365 16026901

Neighbor

gene id symbol gene type direction distance location
islr2 islr2,LOC107662462 coding downstream 30247 15979981 ~ 15984118 (-)
ccdc33 ccdc33 coding downstream 157704 15839686 ~ 15856661 (-)
ano5 ano5 coding downstream 303759 15666349 ~ 15710606 (-)
LOC103041761 NA coding downstream 351078 15662002 ~ 15663287 (-)
slc17a6 slc17a6,slc17a6a,LOC107555703,LOC107570095,LOC107677426 coding downstream 353532 15645079 ~ 15660833 (-)
man2c1 man2c1,LOC107682572 coding upstream 13164 16040065 ~ 16051577 (-)
ca12 ca12 coding upstream 28155 16055056 ~ 16085634 (-)
dapk2 dapk2,dapk2b,LOC107752317,LOC107757761,LOC107659496,LOC107573357 coding upstream 230437 16257338 ~ 16313325 (-)
tbc1d2b tbc1d2b,LOC107698183,LOC102789207 coding upstream 290983 16317884 ~ 16350164 (-)
cib2 cib2,LOC103027299,LOC107573330,LOC107752320,LOC101476243 coding upstream 357648 16384549 ~ 16414345 (-)
LOC111193099 NA non-coding downstream 60552 15853302 ~ 15953813 (-)
G73910 NA non-coding downstream 370113 15643821 ~ 15644252 (-)
G73877 svip non-coding downstream 436867 15572334 ~ 15577498 (-)
G73870 NA non-coding downstream 485903 15448674 ~ 15528462 (-)
G74091 usp3,LOC107659494 non-coding upstream 76715 16103616 ~ 16108725 (-)
G74199 NA non-coding upstream 175623 16202524 ~ 16215525 (-)
G74202 LOC108433646 non-coding upstream 192195 16219096 ~ 16222273 (-)
G74203 NA non-coding upstream 225591 16252492 ~ 16252752 (-)
G74205 NA non-coding upstream 259327 16286228 ~ 16292019 (-)
LOC103046265 pkp3 other downstream 233687 15758303 ~ 15780678 (-)
LOC103040324 NA other downstream 599752 15381329 ~ 15414613 (-)
LOC103037068 cpne8,LOC108274474,LOC107679956,LOC107752477,LOC107723993,LOC105026415,LOC106561599,LOC105028206 other downstream 800081 15123814 ~ 15214284 (-)
hbp1 hbp1,LOC107732286,LOC107701066 other downstream 1217082 14709058 ~ 14797283 (-)
LOC103025073 dynlrb2,LOC103025073,LOC106573385 other downstream 1468829 14542196 ~ 14545536 (-)
LOC103041134 rps27l,zgc:136826,LOC107752326,LOC107598918,LOC101156845 other upstream 440188 16467089 ~ 16470323 (-)
nrg4 NA other upstream 1850125 17877026 ~ 17885395 (-)
G74591 isl2,LOC105022634 other upstream 1955846 17982747 ~ 18029747 (-)
G74791 NA other upstream 2912273 18939174 ~ 18940464 (-)
LOC103034453 LOC108436916,LOC107753633,LOC107659484,LOC107573489,LOC107752304,LOC108181664,LOC107598834 other upstream 2965767 18992668 ~ 19008366 (-)

Expression


Co-expression Network