LOC103024759


Basic Information

Item Value
gene id LOC103024759
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 16088865 ~ 16093616 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007228255.3
ACTGTAATTTATGAGCCCTCATTCACTTCGGCTGCATCCCACAGATCACACCACCGCCATGAAGGAtcttaatgtatttttgctCTTCTTTGCTGTTTTCTACTCTACAAAGGGACAGACTACAGCACCATCCATCTGTGACCTGCCAAAAGATGAAGGAACGGGCTCAGATGTAAAAGTCTACTTATACTACGACAAGGTTGAAGACAAGTGCTTTCCATTCCGTTACATGGGAGAGGGGGGTAATGGAAACCGCTTCACTGCTGAGCATCTCTGCATGAGAAACTGTTCAGCCAGAGCTGAGGAGCTCTACCCTTCAGTCAGATCTGATTCCTGCCACTTGCCGAAGGCTCCAGGAGACTGTTATGGTGCATATCTGCGCTACTACTATGATTCTCTTCATGCGAAGTGCAAGACGTTCTACTGGACTGGCTGTGTGGGAAATGGAAACCGTTTCCTTGATATTCAGCGTTGCAATGATACATGTTTTGGAATTCTAGATGCAGGagaagaaaaggaggaggaAGTGGAATCTGACACACCAATTGGCATCATTTTGGGAGTTGCTTTAGGCATTATTGGAGCCATTATTCTCATTGTTGTGCTTGTTCTGACACTAAAgCCTAGctcaaaaaaaagcaaagcgaAGGCCAAAGAAGTTTCTAAGGATGCAAGTGCTCCTGGACCAGAATTACCTCTTCAAGAAGCAGCGACTGAAATGGCCTGAGGGACCACAGTGCAGTTTGAAACACTGTTTGAAAGTCAGCATGACTACCTAAATATGCCGAAGCATATTTTAGGTAATCACTACAATGGACACAATGTACAGTACATGTGGGCACACAAGATATGTTTTTGTATGAATATGTGACAGTTttgatatgaatatgaacgCAAGTTAAATTAGAAGAGTATGGTTATTAATGTTGTTGTCCCTGTGCTTGATGATTGTAATTTTAGATGTCATATTGGTAAGCTTTGGCACTACTCAAAATACTGCAGAAAGTGTACCATTATTAGTCTGTCTGTTTTAATAAGGAATGTAATCTATGTTGTGCTAAGAGTTCAGCCAGCTCCTATAACACTCCATAGTCATTTCATAAATGTGTCAAAAAAGTAGTTATGTATAGAATTGATGTAATTCCCAATTCAATGCAGAATATTAAGCCCTCAGTCACAGCCTATCTAGCAACATCAACTttgaaaaatacatgtttatttttacagttttttttttctatttctattttcttcttAAAATCTGTACCTTCTATTCCAATAACAGGTCTTCCTGtgtaataactaaaataaaaataaaggaaaaatgacaataaaggaAGACAACAAGGAGGGTgaaattaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007228255.3 True 1363 mRNA 0.39 6 16088865 16093616

Neighbor

gene id symbol gene type direction distance location
neil1 NA coding upstream 48815 16032374 ~ 16040050 (+)
LOC103023069 commd4,LOC103023069,LOC107576274,LOC107757759,LOC107598913 coding upstream 57427 16027462 ~ 16031438 (+)
stra6 stra6,LOC107751266,LOC107589314,LOC107703182,LOC107662458 coding upstream 109762 15951937 ~ 15979103 (+)
LOC103021835 cyp11a,LOC108442685,LOC106561846,LOC105007422,LOC107703186,LOC107751280 coding upstream 249018 15831457 ~ 15839847 (+)
stoml1 stoml1 coding upstream 260316 15821393 ~ 15828549 (+)
usp3 usp3,LOC107659494 coding downstream 1593 16095209 ~ 16108728 (+)
fbxl22 fbxl22 coding downstream 28053 16121669 ~ 16133261 (+)
LOC103025905 LOC108433646 coding downstream 117984 16211600 ~ 16222093 (+)
sh2d7 LOC103027007 coding downstream 266313 16359929 ~ 16369370 (+)
lrrc61 lrrc61,LOC107752319,LOC107598843,LOC107757768 coding downstream 322075 16415691 ~ 16428455 (+)
G73990 man2c1,LOC107752311 non-coding upstream 37322 16050709 ~ 16051543 (+)
G73975 NA non-coding upstream 95029 15993169 ~ 15993836 (+)
G73970 NA non-coding upstream 192343 15895719 ~ 15896522 (+)
G73941 pkp3,LOC107589311 non-coding upstream 323740 15764540 ~ 15765125 (+)
G73891 NA non-coding upstream 419096 15666348 ~ 15669769 (+)
LOC103025699 NA non-coding downstream 40868 16134484 ~ 16147862 (+)
G74168 NA non-coding downstream 192642 16286258 ~ 16291939 (+)
G74182 NA non-coding downstream 280012 16373628 ~ 16373843 (+)
G74191 acsbg1 non-coding downstream 353664 16447280 ~ 16450389 (+)
G74192 NA non-coding downstream 357902 16451518 ~ 16452533 (+)
svip svip other upstream 511332 15572302 ~ 15577533 (+)
rpgrip1l rpgrip1l other upstream 1167862 14891534 ~ 14921003 (+)
G73533 NA other upstream 1439314 14648829 ~ 14649551 (+)
LOC103043719 NA other upstream 3190934 12871484 ~ 12897931 (+)
LOC103022150 brsk2a,brsk2b,LOC107707552,LOC107675281,LOC107600443 other upstream 5461901 10272919 ~ 10626964 (+)
G74169 NA other downstream 193060 16286676 ~ 16288329 (+)
G74649 NA other downstream 2361235 18454851 ~ 18455197 (+)
LOC103029914 scamp5,scamp5a,LOC108436905,LOC103363822,LOC107395508,LOC107703195 other downstream 2377088 18470704 ~ 18479345 (+)
G74832 NA other downstream 2989200 19082816 ~ 19085556 (+)
cadps2 NA other downstream 3046533 19140149 ~ 19322775 (+)

Expression


Co-expression Network