dapk2 (dapk2,dapk2b,LOC107752317,LOC107757761,LOC107659496,LOC107573357)


Basic Information

Item Value
gene id dapk2
gene name dapk2,dapk2b,LOC107752317,LOC107757761,LOC107659496,LOC107573357
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 16257338 ~ 16313325 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007228260.3
GCCAatctaacattattttttatttatatttaaatcaaccaatcaccaggTGTGATTAATTGCGATGAAACAGAGAATACCTCTATCATTAGTAGTTTTATTCTAGTTATTTTAGTTCCCACTAGTTATTATAGGGCAGAGTAGCCAGCAGGGCGCGCGCGAGCTGACAGCACGAGCGCGTGCGTGTGTAATAtaagtcagtcagtcagaaGCCGAAGCGGAGCGACCACCGTCCCGGCGCGCGGAcagagagcagcttcagcagcccAGCAGCCACACTGTCCACTGATAGAGAAGAGCCAGAACCTTCAAACACACCCAGAGGAGTCAGCATCTCGTGAGGACTCGTGCGCTGCTGCTGCCCTGAGGGTGGATATTCCCACTGGACCCGCAGACCTGCTTCAGTGTTGAACTTTTATAAAGACACAATCACCATCATCAATGAGGACACTGGGCATGGCTGTGTTCAAGCAACAGAAAGTGGAGGATTTTTATGAAATTGGAGAGGAGCTCGGAAAtGGACAGTTTGCTATAGTGAAGCGATGTAAGGAGAAGAGCACAGGAGTGGAGTATGCAGCAAAGTTCATAAAGAAACGACAGAGCAGAGCGAGCAGGAGAGGAGTGCGGCGAGAGGAGATCGAGAGGGAGGTGAACATTCTTCAACATCTCCAGCACCCCAACATCATCTCACTGCATGATGTCTACGAGAACCGCACCGACGTGGTCCTTATCCTCGAGCTggtCTCTGGAGGAGAGCTCTTTGATTTCCTGGCTCAGAAGGAATCTCTGAGTGAAGAGGAGGCGACGGAGTTTATCAAACAGATTCTGGATGGAGTTCAGTATCTACACTCCAAACGCATTTCGCATTTTGATTTGAAGCCTGAGAATATTATGCTGCTTGACAACAACGTCCCTCTGCCACGAATCAAGCTTATAGACTTTGGCCTGGCTCATAAAATCGAAGATGGTGTCGagttcaaaaatatttttggaaCGCCAGAATTTGTGGCTCCAGAGATTGTCAACTATGAGCCTTTGGGATTAGAAGCAGACATGTGGAGCATCGGAGTCATCACATACATCCTTTTGAGTGGTGCTTCCCCATTTCTGGGCGAGTCTAAACAAGAAACCATGGCAAACATTTCTGGCATGAACTATGAGTTTGATGAGGAATTCTTCGGCAGCACGAGTGAGCTGGCTAAGAACTTCATCAGACAGCTGCTTACAAAAGACACAAGAAAGAGGCTCACAATAGAAGGTGCTCTTAACCACCCGTGGATAAAGCCTGTGAATCCTAGACAAGCTCTGGTGCGCAGACAGTCTGTGGTCAACATTGAGAACTTCAGACGGCAGTACGCTCGCCGGAGATGGAAGttctccttcaggattgtagCTCTCTGTAACCATTTGACACGCATGATGAAGAAACCACAAGACAGGCCTAAAGAGGGATACGTGGAGCGCACAGTGGCCATGTTTGAGAGGGAATGTGAGAGTGATCAGGAGGAGGAGGTAATGCTTAGGAGACCCAGGACCAGGAAGAGGAGCAGCACTTCTTGAATCTTGAAGCTCCTACACAGAGGACAATGGGTCTGTCGTAAGCAAAGACACAccagctgtgaaaaaaaaacacattggtGTAAAACAGTCCCGGTTGTGCCTTTAACAGGTACACACCCTATAAGGAAAGTGTTTTATAAGAGGGTCTGAGTCATGTAAATATATGCCTTGgccacactcacacatacagttGTTTGTCAAATAACTGCGTCAAGAAAAGTGATGCAATAAGTGCCAGGAATTGAAAtaggatgtttttttaaagctgtgcaCAAAATGTTCATGCACTTATTGGGGTTtggggaaaagagagaaagattttTTTACTGCTTATGAAGTTCCATGAGTGAAATGTTAGGTGTAACATGGAAAGCTGTTAAGCAACCGTCCCTGTGAGCAAAGAGCAACGGGACTTTCCAGTCTACTGTCTTAAAAAAGTGCCTGTTGTCTTAATACAGTATGTGCCATGAtattttgcatttgttttgCTACAAATACGCTTATAAACGACCAATGGAATTAAATTGTTGAACTATGTAATATGTTACTAGTGTAGTTAATTAACATTTTCATGATCTAGTTGAGCCTTTTtgtcttaaagtcttaaaagtTCTTTATGGGACAATATCTGTAatatttcatgtatttaaaaACTAACTGAAAGGTGAGTTTGACAGTCTTACATTACTAGGGATTGCACAATACATATTTCACAAGATTAAAGACATCGTTCAGGATACCATATTCAGGattgtctgaaaaaaaatagttgtttctctttttttaatggaaatgtgtcatattttttaaatcagggCACAATATGCTACCTCACAAGACACTTTGGGAagcaaaacatcaaaaacaaccaACCCACACTAGTAGAAAGTTATTATGGTATTCTGGTTCAATCATTTAAtcatactaaaaaaaa
>XM_015601364.2
ctcCACTTCATAGTGGAGCCAatctaacattattttttatttatatttaaatcaaccaatcaccaggTGTGATTAATTGCGATGAAACAGAGAATACCTCTATCATTAGTAGTTTTATTCTAGTTATTTTAGTTCCCACTAGTTATTATAGGGCAGAGTAGCCAGCAGGGCGCGCGCGAGCTGACAGCACGAGCGCGTGCGTGTGTAATAtaagtcagtcagtcagaaGCCGAAGCGGAGCGACCACCGTCCCGGCGCGCGGAcagagagcagcttcagcagcccAGCAGCCACACTGTCCACTGATAGAGAAGAGCCAGAACCTTCAAACACACCCAGAGGAGTCAGCATCTCGTGAGGACTCGTGCGCTGCTGCTGCCCTGAGGGTGGATATTCCCACTGGACCCGCAGACCTGCTTCAGTGTTGAACTTTTATAAAGACACAATCACCATCATCAATGAGGACACTGGGCATGGCTGTGTTCAAGCAACAGAAAGTGGAGGATTTTTATGAAATTGGAGAGGAGCTCGGAAAtGGACAGTTTGCTATAGTGAAGCGATGTAAGGAGAAGAGCACAGGAGTGGAGTATGCAGCAAAGTTCATAAAGAAACGACAGAGCAGAGCGAGCAGGAGAGGAGTGCGGCGAGAGGAGATCGAGAGGGAGGTGAACATTCTTCAACATCTCCAGCACCCCAACATCATCTCACTGCATGATGTCTACGAGAACCGCACCGACGTGGTCCTTATCCTCGAGCTggtCTCTGGAGGAGAGCTCTTTGATTTCCTGGCTCAGAAGGAATCTCTGAGTGAAGAGGAGGCGACGGAGTTTATCAAACAGATTCTGGATGGAGTTCAGTATCTACACTCCAAACGCATTTCGCATTTTGATTTGAAGCCTGAGAATATTATGCTGCTTGACAACAACGTCCCTCTGCCACGAATCAAGCTTATAGACTTTGGCCTGGCTCATAAAATCGAAGATGGTGTCGagttcaaaaatatttttggaaCGCCAGAATTTGTGGCTCCAGAGATTGTCAACTATGAGCCTTTGGGATTAGAAGCAGACATGTGGAGCATCGGAGTCATCACATACATCCTTTTGAGTGGTGCTTCCCCATTTCTGGGCGAGTCTAAACAAGAAACCATGGCAAACATTTCTGGCATGAACTATGAGTTTGATGAGGAATTCTTCGGCAGCACGAGTGAGCTGGCTAAGAACTTCATCAGACAGCTGCTTACAAAAGACACAAGAAAGAGGCTCACAATAGAAGGTGCTCTTAACCACCCGTGGATAAAGACCCGTCAGCAAGTTGAAGACCCCAGCTTACCTGCAGAACCCCAGAACAAGGACGAGCCATGCCAGCTGAAGACCAAGCGCTTAAAGGAGTACACCATCCACTCTCACTGCAGCACTGCACCGAACAACACTTATATCAACTTTGAGCGCTTTGCCCGTGTAGTGGAGGACATCTCTGTCATAGAGACGGGCCTGGCGGAGGTGGCAAAGAAGCGGGAGTCACTTCATGGGGACACTGAAGCGCTGCTCTCCATATACAATGAGAAGGAAGCTTGGTAcaaggaagagagtgagagtgtgcgACAGGGCTTCACACAGGTCCGTTACGAGCTCAGAAACGTTGAGGAACTGAGGAAGGGAGTCCAGGAGGATCTGAGAGCAACAGACGCCAACCTGACCAGCATTAGCGACCGCTACCTGGAACGTCAGGCCCACCTGAGCGCTCTGAGAGAGGAGCTGGATGCAGAACTGAGCTGGCTACAGGATGTTTTGGGCTCTTTAAATGGAGAGGTGGAGAATGGAACACAGTGCTCCGCTCCTGCTCTTAATAATGAAGTCAACGAGGCTCTGAAGGAACTGCTGGGCAAAGCCTGTGGAGGAGAGATATGCTGTGGGGTCCTCGCCAAGAACAGCTCATCCCTATCAGAGTCTCCCTGATAGAAATTAGAATGTGTATTTCTCAGGCAGCATGCTTATGTGGGGCATATATGGGTACAACTTTGGCTAGGTGGGTTCCAGTTGGGCAAGGGCTGGTTTTTCATTGTTACAGATCATTTAAACCTCATCTAGTTGTCCCCTCTACAGTATATTACCCAAATGGGGTCCATATTTACCCTCTCTCGGTCCCACCACCACTGCACCCTGTTGGGGGCCCACCACTGGCATCAATATGTGATATGTGGCCAACATAGAacccataaaaaacaaaacttgctGGTTCTCAATTGGACTCATACTGATCCCTCATGGGCGTGTGAACTGGGTTAATGTCAGGGCTCCCAAAGATTTGCATGCATTTTCATGCAATTTCAGTTATTATGCAAATTGGTTAGTGCTTGAATGGTGATTTGTTGGAACTCTTTTGCACACATAGACCTGAATAAGGCTCTGTTttctgttcatatttttgt

Function

symbol description
dapk2b Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in intracellular signal transduction and positive regulation of apoptotic process. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm and nucleus. Orthologous to human DAPK2 (death associated protein kinase 2).
dapk2 Enables ATP binding activity; calmodulin binding activity; and identical protein binding activity. Involved in several processes, including anoikis; positive regulation of granulocyte chemotaxis; and regulation of intrinsic apoptotic signaling pathway. Located in Golgi apparatus.

NR:

description
death-associated protein kinase 2 isoform X1

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG:

id description
K08803 DAPK; death-associated protein kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007228260.3 True 2494 mRNA 0.43 12 16257338 16313308
XM_015601364.2 False 2431 mRNA 0.48 10 16261965 16313325

Neighbor

gene id symbol gene type direction distance location
ca12 ca12 coding downstream 171704 16055056 ~ 16085634 (-)
man2c1 man2c1,LOC107682572 coding downstream 205761 16040065 ~ 16051577 (-)
sema7a NA coding downstream 230437 16014365 ~ 16026901 (-)
islr2 islr2,LOC107662462 coding downstream 273220 15979981 ~ 15984118 (-)
ccdc33 ccdc33 coding downstream 400677 15839686 ~ 15856661 (-)
tbc1d2b tbc1d2b,LOC107698183,LOC102789207 coding upstream 4559 16317884 ~ 16350164 (-)
cib2 cib2,LOC103027299,LOC107573330,LOC107752320,LOC101476243 coding upstream 71224 16384549 ~ 16414345 (-)
acsbg1 NA coding upstream 134171 16447496 ~ 16457754 (-)
LOC103042575 LOC108433637 coding upstream 176322 16489647 ~ 16528087 (-)
otud7a otud7a,si:dkey-37f18.2,LOC107715690,LOC107752330,LOC107659507,LOC107550219,LOC107698115,LOC107598848,LOC108275340 coding upstream 304826 16618151 ~ 16738665 (-)
G74203 NA non-coding downstream 4586 16252492 ~ 16252752 (-)
G74202 LOC108433646 non-coding downstream 35065 16219096 ~ 16222273 (-)
G74199 NA non-coding downstream 41813 16202524 ~ 16215525 (-)
G74091 usp3,LOC107659494 non-coding downstream 148613 16103616 ~ 16108725 (-)
LOC111193099 NA non-coding downstream 303525 15853302 ~ 15953813 (-)
G74211 NA non-coding upstream 3620 16316945 ~ 16321653 (-)
G74265 NA non-coding upstream 194679 16508004 ~ 16508462 (-)
G74285 NA non-coding upstream 327517 16640842 ~ 16641656 (-)
G74286 NA non-coding upstream 346178 16659503 ~ 16690357 (-)
G74295 NA non-coding upstream 429735 16743060 ~ 16747522 (-)
LOC103046265 pkp3 other downstream 476660 15758303 ~ 15780678 (-)
LOC103040324 NA other downstream 842725 15381329 ~ 15414613 (-)
LOC103037068 cpne8,LOC108274474,LOC107679956,LOC107752477,LOC107723993,LOC105026415,LOC106561599,LOC105028206 other downstream 1043054 15123814 ~ 15214284 (-)
hbp1 hbp1,LOC107732286,LOC107701066 other downstream 1460055 14709058 ~ 14797283 (-)
LOC103025073 dynlrb2,LOC103025073,LOC106573385 other downstream 1711802 14542196 ~ 14545536 (-)
LOC103041134 rps27l,zgc:136826,LOC107752326,LOC107598918,LOC101156845 other upstream 153764 16467089 ~ 16470323 (-)
nrg4 NA other upstream 1563701 17877026 ~ 17885395 (-)
G74591 isl2,LOC105022634 other upstream 1669422 17982747 ~ 18029747 (-)
G74791 NA other upstream 2625849 18939174 ~ 18940464 (-)
LOC103034453 LOC108436916,LOC107753633,LOC107659484,LOC107573489,LOC107752304,LOC108181664,LOC107598834 other upstream 2679343 18992668 ~ 19008366 (-)

Expression


Co-expression Network