LOC103041761


Basic Information

Item Value
gene id LOC103041761
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 15662002 ~ 15663287 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007228306.3
cTTTCTTTTTGCAGGCGGACACTGTGTCCTGCAGTATGACGGCTCCTGGTCAGGGTGTCATGCGCTTTGTCCAGTTCTTTCTGATGCCGGGCTTTTTCTTAGGAGTGCTGATTTTGGGCGTGCCTCTTAATGTCTTCTCTCTGTGGGTGTTCTCCCGCCGCCTGAGCCGAAGTAACCGTACCATCCTCTTCCTGCACAACCTGGCCATGGCTGACACCTTCTGGCTGCTGGCCTTGCCATTCCTCATCCAGTACCATTTGGTAGGGATGCAGTGGTCTCTGGGCCTGCCTTTTTGCAAGGTCATCCGTCTCCTCTACCACAACTACTTCTACCTCAGTATATTCTTTGTGACATGCCTGAGTGTTGACCGGTACCTGGCTATCGTCCATCCCCTTCGTTCACCTGTTCTCCTCACTCGTCGACGTGCCGTCATTTTATGCATCAGTGTTTGGCTGTTGGCCTTAGCTCTGAGCATTCCAGTGGGCCAACTGACCTACACCTCTCACTGTGAACACAACAACAGGACAGTCTGCATCATCTACGTCTTCATGGATGAGTTTAATGCCAGCCTGTTGTATTCCCTGAGCTGTTCATGCCTGGGGTTCTTTTTCCCCTTCATTGCGCTCAGCTACTGCTACATCCACAGCGTGTGCCACTTGCGCAGGAGGGCCGACCCCCGCCTCAGAGGCCTGGCCTGGGAACTAGGCGTAGCCATGGTCATCTTCGGACTCTTCTACCTGCCCTATCACCTAAGCAGGAATGCAGCCATTATCATGACAGCTCTGGTTCCCCAGGACTCCTCAGCGAAGGAGGCGGCCTACCTGGCCTTCTCTCTggagatgtgtgtgtgcagccTGTCCTCCTGCACCAACCCTCTGTTCAGCTGCTTTGCAGGAAGGCCCGTTCGCAGGGAGCTGAGGTCCACTCTCATGAGGCTGTGGAAAAAACGCAGAGTGGAGCCTCAAACGAAGCAGAAGAAAGAGGAGAGGAACACGAGTGAAGTAAGCACTGTGACAGCCAGCAAGGCAGAGACTGGTGCTAAGATCAAACCCTGGAGCAGCACAGTGACTGTGAAACTGGTTCACTCGAGGGGTCTGGTGTCGACTCTGACAGCTGAGGCACAGAGCAGATGATTCAGATGCTTCCAAAGAGCCTTAGTGATGAGACTAGACCAGTCTTATAGCTGTGTGATGGTCTGTCTCCCAGTATTAGACGCTGTTGGAAAGTGTTGCAGTATGGACATTTAATATACAAGTTCTTGTGGATCAGTCCTTTTGCTCTGTTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007228306.3 True 1286 mRNA 0.53 1 15662002 15663287

Neighbor

gene id symbol gene type direction distance location
slc17a6 slc17a6,slc17a6a,LOC107555703,LOC107570095,LOC107677426 coding downstream 1169 15645079 ~ 15660833 (-)
LOC111193057 NA coding downstream 37085 15621981 ~ 15624917 (-)
gas2 gas2,LOC107677431,LOC107728426 coding downstream 40145 15581036 ~ 15621857 (-)
LOC103042382 LOC108442690 coding downstream 90462 15563971 ~ 15571540 (-)
ano3 ano3,LOC107677449 coding downstream 118222 15460687 ~ 15543780 (-)
ano5 ano5 coding upstream 3062 15666349 ~ 15710606 (-)
ccdc33 ccdc33 coding upstream 176399 15839686 ~ 15856661 (-)
islr2 islr2,LOC107662462 coding upstream 316694 15979981 ~ 15984118 (-)
sema7a NA coding upstream 351078 16014365 ~ 16026901 (-)
man2c1 man2c1,LOC107682572 coding upstream 376778 16040065 ~ 16051577 (-)
G73910 NA non-coding downstream 17750 15643821 ~ 15644252 (-)
G73877 svip non-coding downstream 84504 15572334 ~ 15577498 (-)
G73870 NA non-coding downstream 133540 15448674 ~ 15528462 (-)
G73869 NA non-coding downstream 207392 15449504 ~ 15454610 (-)
G73862 NA non-coding downstream 230695 15430147 ~ 15431307 (-)
LOC111193099 NA non-coding upstream 190015 15853302 ~ 15953813 (-)
G74091 usp3,LOC107659494 non-coding upstream 440329 16103616 ~ 16108725 (-)
G74199 NA non-coding upstream 539237 16202524 ~ 16215525 (-)
G74202 LOC108433646 non-coding upstream 555809 16219096 ~ 16222273 (-)
G74203 NA non-coding upstream 589205 16252492 ~ 16252752 (-)
LOC103040324 NA other downstream 247389 15381329 ~ 15414613 (-)
LOC103037068 cpne8,LOC108274474,LOC107679956,LOC107752477,LOC107723993,LOC105026415,LOC106561599,LOC105028206 other downstream 447718 15123814 ~ 15214284 (-)
hbp1 hbp1,LOC107732286,LOC107701066 other downstream 864719 14709058 ~ 14797283 (-)
LOC103025073 dynlrb2,LOC103025073,LOC106573385 other downstream 1116466 14542196 ~ 14545536 (-)
G73172 NA other downstream 3040646 12610834 ~ 12621356 (-)
LOC103046265 pkp3 other upstream 95016 15758303 ~ 15780678 (-)
LOC103041134 rps27l,zgc:136826,LOC107752326,LOC107598918,LOC101156845 other upstream 803802 16467089 ~ 16470323 (-)
nrg4 NA other upstream 2213739 17877026 ~ 17885395 (-)
G74591 isl2,LOC105022634 other upstream 2319460 17982747 ~ 18029747 (-)
G74791 NA other upstream 3275887 18939174 ~ 18940464 (-)

Expression


Co-expression Network