LOC103032770 (calml4)


Basic Information

Item Value
gene id LOC103032770
gene name calml4
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 26986544 ~ 26999262 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007231192.3
CGCACGTGTGTGAGTGAGCGGGCGAGTGCGCGCGCTGACAGGATAACAGAAGCGGTCACTGTAGCTGTAAAATGGCAAAGTTTCTGTCGCACGATCAGATCACTGAATTTAAAGAGTGCTTTTCACTCTATGACAAAAAGCACAAGGGTAAAATCAAAGCCCAGGACCTGATCACAGTGATGAGATGCCTTGGCTGCAGTCCAACCCTGATGGAAGTGGATAGACATCTGAAGAGACATAATATAGATAAGTGTGAGGAGCTGGACTTCTCCACTTTTCTCACCATAATGTATGAACAGCTTCAGCAGGAGAACCCTGAAGCTGAGATTCTGCAGGCCCTGAGCAGAATGGACAAGCAGAAGAACGGTTATGTTCTGGCCTCTGAGCTCAGAGCAACACTGAGAGTAATGGGAGAGAAGCTCACAGATCAAGAAGTGGATGAGCTCTTCAGAGAGGCTGGCGTGGGCGATGACGAAAACATTCACTATGAAGAGTTTGCGAAGATGGTGACACTGCAATCAACACGATGCTGAAGAGCCTTTacaaagagacagacaatgTGTTAATAGTTTAACAACACACTGGAGGGGAAATTTATTACTGTTTACACTGAGCAATCCTGAGCAGAGGAACCATCACATAATAGTGTTGGTTTAGTAGAGTTCAGATTACTAATAAAGCACTAAATCTTTTTAAGAGGCTTCATTAGACTGATTTACATGCTTAGAGTAGAATTGTATAGAAGATTTATAGcctcatacacactctcactaACATTATTATCAAAGATAAGTACTTGACTGGGTGCCAGTTGGTCAAATCATTTACTAAGCGTGGGACGTTTTGAGAAATGACCACTTGttgatgctgtgtgtgtgtgttttgaacaGTACTATGAAAGAAGGGTGTGTGAGGAATTGTGAGCTTTGTGTTTTCTTAAACTGGAGACTTTTagatttaaccttttttattttttcataaatgtttttttttttaactacagtAGATTTGCACAGATCTGTATTTCACAGATACATTCACATTGATCTGAAGCAGCAGATCAATGTCTCATCTTAAAGTAATATGGGAGATTCTGTTGTAAGAACtattataaataaagttaagGTTTGTTCTTTTCTATAGCAATAATACCCAGTCCGCTCAATTCTGTAGAGGATATTGCTACACGTTTTAAGTATCATTGACTGCACTCCTATATCTTCAATCTAACAATCTTCTTGAATTTGTTTTTATGAAACATCCTGACAAAAGTTTACATCAGCTtcatgaaaaatgtttttaactcACAGCTCGGCTCTTATAACGATGAATCCTATTGtaaaatcccaaataaaaagaCATTCATGAATAAATA

Function

symbol description
calml4 Predicted to enable calcium ion binding activity and enzyme regulator activity. Predicted to be involved in regulation of catalytic activity.

NR:

description
calmodulin-like protein 4

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007231192.3 True 1375 mRNA 0.39 5 26986544 26999262

Neighbor

gene id symbol gene type direction distance location
LOC103032468 cln6,LOC108412537 coding upstream 4141 26968636 ~ 26982403 (+)
LOC103031630 LOC108412538 coding upstream 28150 26891876 ~ 26958394 (+)
mon2 mon2 coding upstream 415829 26515189 ~ 26570715 (+)
LOC103027405 LOC108429445,LOC108274519,LOC107558592,LOC107668651 coding upstream 472523 26490615 ~ 26514021 (+)
LOC103027718 akr1d1,LOC108429448,LOC108429446,LOC103366982,LOC103366736,LOC108250100,LOC103380316 coding upstream 502363 26475507 ~ 26484181 (+)
LOC111193118 NA non-coding upstream 300866 26683888 ~ 26685678 (+)
G76838 NA non-coding upstream 306654 26679640 ~ 26679890 (+)
G76833 NA non-coding upstream 415145 26571180 ~ 26571399 (+)
G76655 NA non-coding upstream 839792 26145625 ~ 26146752 (+)
G76646 LOC108429453,LOC107701195,LOC107549599,LOC107728334,LOC108275118,LOC107668648 non-coding upstream 893351 26087189 ~ 26093193 (+)
G76931 NA non-coding downstream 932 27000194 ~ 27000955 (+)
G76939 NA non-coding downstream 48323 27047585 ~ 27047821 (+)
G76464 NA other upstream 1690076 25294501 ~ 25296468 (+)
LOC103026466 LOC108429386,LOC108274988 other upstream 1705173 25271256 ~ 25281371 (+)
G76423 NA other upstream 1801812 25184085 ~ 25184732 (+)
LOC103022708 NA other upstream 1982029 24988396 ~ 25004515 (+)
LOC103022391 parvb,LOC108432702 other upstream 2002830 24974941 ~ 24983714 (+)

Expression


Co-expression Network