hdac10


Basic Information

Item Value
gene id hdac10
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 24952825 ~ 24966947 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007235102.3
tttctcttttAACAGCCCGCGAGAAGTTGGTGAGGAAGTGAGACGGCTGTCCTCAACTGACCCTAACGAAAACTGCGGGATTACTGACCCAGTTTACACCAGCCGCCAGTCTCTCCCGTTAACCTCTAGTTTGAGGGTCTGTGTTGGTGATTATAATCCACAGCGGTCTACAGTCTACGGCACCATGAGCGGAACTGCGCTGATCTACGATGAGGAGATGAGCCGCTACCAGCTGCTCTGGGACGATCCTGTGTGCGCGATCGAGGTTCCGGAGCGCCTGACGAGGAGCTACGAAGCTGTGAAGAGCGCGGGGCTGGAGAAGCgctgtgtgcctgtctctgtcCGCGAGGGAACGGAGGAGGAGATTCTTCTGTATCACAGCAAAGAATATCTAGAACAAGTAAAACAGACACCTTCCATGAGCGTGGAGGAACTGAAGACCTTCACTCAGCAATTTGGAGATGTCTACTTCCATCCTAACATCTACAATTGTGCTAAGCTGGCTATTGGGGCCTCACTGCAGCTAGTGGACAGTGTAATGAAGGGGAAGGTGAGAAATGGAATGGCCCTTGTCAGGCCCCCTGGTCATCACAGCCAGCGGAGCGCAGCCAATGGTTTCTGTGTGTTCAACAATGTGGCCATTGCAGCTCTCTATGCCAAGAAGCACTACAACCTAAACAGGGTGTTGATCGTGGATTGGGATGTTCACCATGGGCAAGGTGTCCAGTACTGCTTTGAAGAAGACCCTAGTGTGCTGTATTTCTCATGGCACCGCTATGAGCACAAGAGTTTCTGGCCCAATCTTGATGAGTCTGACTATAATACTGTGGGTAAAGGCAAGGGAACTGGCTTCAACATCAATGTGCCCTGGAACAAGGTGGGAATGACCAACAGTGACTACTTATCTGTATTCTTCCATGTCCTTTTGCCTGCTGCATATGAGTTTGATCCTGAGCTGGTGCTGGTCTCTGCAGGATTTGATTCTGCCATAGGAGACCCAGAGGGTCACATGTGTGCCACTCCAGAGATCTTTGGACACCTCACTCACCTTCTCATGTCCTTGGCAAAGGGTAAATTGTGTGTTGTCCTTGAGGGCGGATACAACCTAACCTCACTTACTCAGTCAGTTTGCCAGACAATGCATACCCTGCTTGGAGACCCCACACCTTTACTGAGTGGTATTGGCTCCCCATGTCACAGTGCTCTGGAGTCTGTTGTGAATGTTCGAGCAGTTCACCGGAAGTACTGGAACTTTTTGAAGTATGCAGCCGATCCCCAAATTTTAGAGCCAAGCACCAAGCGCCGCAGATTGGAGAACACGGCTGAAGAGAacaaggaggaggagaacaccgagaaggaaaaggaggagaaaaCCGAGGAGAAGCCTGAGGATATTAAATGGCCTGAGCCCTTACCCAGGCCTGCTCCTCCTGTGCAGACAGTTGTGGCAAGCTCCACAGAACTGGAGTCTCTCCCAAAGGGCTGCCAGATGCTGGGTAAAATCCCACAAAAGTGTATTGAGGAAGCAGAAAAAATCAGGAAAGAACATTTTCAAGGTTTGACTGATAAGACGTCATCAGAGTGCTTCCAGCACATTGTTTCAATTTTGGAGAAAGTACAAAACAAAGAGGTGCGTAATGGCATGGTTGTGGTGCCTGATGTGTGTGCTTCTGTGAGATTTGCTGTTCAGCATGCCTTGAACTCCCTCTCTAAGAGGGTTTTGGTGGTGTTTGTGGGGGATGAGGATGTTCAAGTTGACACAGGCAGTGGgaaaGTGCTTTTGCTGCAGATCTGTAGTAAGGAGCCTGGAGTGGTGAAGTCAGACTACCATGTGCCTGTGTGTCTGAGCAAGGCTGGGCACTCCAGGGCGAGTGTGATGCAGGCACTGATTGGTCTGCTCCTGCCCCTGGCTTACGAGTTTAGTCCTGACCTGGTGCTGCAGGTACTGACGAGCAGTTCTGGGTTGGAGATGCCTGTGTGGGCACAGGTCAGCTCCCTGCTGCAGGGATTAGCACAGGGCAGGACACTGGCCCTACTTCAGGGCTGTGACAAAGACATGGTGGGAGCTACATGTTCCTCTCTGTCTGGTTCTCCTGCTCCTATTCTTGGTCCTCTGGGTCATCCTGTGGATAAAGATGTAGAATTTAttgagaaacagagacagagactggagaAAAAATGGGGCTTGCTGCGCAACTCTTttTCAGAAAGCGGAACAAAGAATCAGGATGGATGAGCAATGAACAAGCACCAGTTGGTCACACCCAGATgacaagacatttttttatagtGTGAGTGATGTTCCATAATAAAAATGACCTTTTAGTTTCTGTCATTTCTTAATCTATATTTTCCTCATTTGCTTTTGGTAGAAGGTATGTCTATgaatttatttcagtgatttagTAAACTGGTTTGctgttacatacattttttgaacaaaactgtttttattgagCCTTACCCATTACTGTCAGTTCATAAGTATTATGAAACACTTCCTGATACAGAGGAAAATTACTGAACATCTGTCATCATCTCAATGTCTTTAGTGGTGGATATGTCCTTTAGGGACAAAagtaaattgttttaattgcaataaataaaagcacCTTAAGatcttttatttacaatttaaagtagtgttgttgttgtagtaatgttataataaatgGCATCAGTGTGCTTCTGCCACTAGTCCTGTAAAGAcaaatattaattctaaaaaacagCACTTGTGTTTtgtaatagttttgtatttttgtattggaATAAGTAATAGATTTCATACAGTGATCCAACTAATCCAACTAAAAGAATGAGTTTTGCTCTGtagtatattgtgttatttccgataaaaaaaaaatctgtattttttcttaatCAATATTTAGCATGATCAGTAAGTTatctatttttttgctttttttgctatCAGTGATTCATATGTAACTATGGGTGAAATCCATATGCGCTTTGTGTCGAGATGGGCCCCAGGGTCTCTTCTTGGAATTGGTACAAAAAACGGTATATGTAATCAGTATTTTGACTGTTTGAGATATGTAGGTGCTTCATGATGACTGACTATGCATTTTAACAACTGATGGAAACCTATGCTGCTGTTTAAGATAATAACAGGCTTTTTAAACAAGTTTAAGGCCagtgattttagttttagtttgctCAACCCTGAGGATGTACTGGTGGGTTGAGGTCTAACATAAAGACTTGTTAAAAACTATGGTGAGCTGAGCAGAACGGGAGTAGCTGGGAGATGCTGGCTGAGAGCTTCCAGCATGTGACTCAAGGGAAAACTGTTTGCTTTCTGACCAAACCGTGGAAGACAGACCATTAAGGTCATCATGCATAGTCAGAAACTCTTCACACAACTTTCTTTGTTTTGCTTCTTTCTTTAACtttgatttatattttcctTATGTTTTTTATCCATTGCATTCAAATCCCTGTTTTTCCAGgacattcttttaaataaactggCAAAGCAAT

Function

NR:

description
histone deacetylase 10

GO: NA

KEGG:

id description
K18671 HDAC10; histone deacetylase 10

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007235102.3 True 3507 mRNA 0.44 20 24952825 24966947

Neighbor

gene id symbol gene type direction distance location
LOC103025216 NA coding upstream 6139 24927013 ~ 24946686 (+)
LOC103024697 NA coding upstream 33375 24899036 ~ 24919450 (+)
LOC111193061 NA coding upstream 81459 24865790 ~ 24871366 (+)
myrf myrf coding upstream 91899 24802002 ~ 24860926 (+)
fads2 fads2 coding upstream 212742 24725144 ~ 24740083 (+)
LOC103044987 NA coding downstream 219678 25186625 ~ 25230901 (+)
gtf2h1 gtf2h1,LOC107572319 coding downstream 269472 25236419 ~ 25246778 (+)
hps5 hps5,LOC106584758 coding downstream 282683 25249630 ~ 25263215 (+)
LOC111193062 NA coding downstream 302731 25269678 ~ 25271254 (+)
LOC103045999 LOC108429466,LOC106561822 coding downstream 335288 25302235 ~ 25312163 (+)
G76349 NA non-coding upstream 30385 24921135 ~ 24922440 (+)
LOC111193114 NA non-coding upstream 241874 24566804 ~ 24710951 (+)
G76226 NA non-coding upstream 366693 24561664 ~ 24586132 (+)
G76225 NA non-coding upstream 389665 24527631 ~ 24563160 (+)
G76219 NA non-coding upstream 496134 24454211 ~ 24456691 (+)
G76367 NA non-coding downstream 17205 24984152 ~ 24984391 (+)
G76463 NA non-coding downstream 326458 25293405 ~ 25293928 (+)
G76468 NA non-coding downstream 350248 25317195 ~ 25318657 (+)
G76472 mpi,LOC106560745,LOC106584640 non-coding downstream 356446 25323393 ~ 25327069 (+)
G76505 neo1,LOC108275206 non-coding downstream 389317 25356264 ~ 25359567 (+)
G76358 NA other upstream 4676 24946788 ~ 24948149 (+)
LOC111193110 NA other upstream 54288 24873400 ~ 24898537 (+)
G76192 NA other upstream 692319 24258509 ~ 24260506 (+)
LOC103035272 LOC108432640,LOC107569703,LOC107720762,LOC107670190,LOC107740887 other upstream 869981 24053061 ~ 24082844 (+)
LOC103038709 LOC103038709,LOC108432651 other upstream 914964 24032092 ~ 24037861 (+)
LOC103022391 parvb,LOC108432702 other downstream 7994 24974941 ~ 24983714 (+)
LOC103022708 NA other downstream 21449 24988396 ~ 25004515 (+)
G76423 NA other downstream 217138 25184085 ~ 25184732 (+)
LOC103026466 LOC108429386,LOC108274988 other downstream 304309 25271256 ~ 25281371 (+)
G76464 NA other downstream 327554 25294501 ~ 25296468 (+)

Expression


Co-expression Network