adck2 (adck2,LOC107669038)



Basic Information


Item Value
gene id adck2
gene name adck2,LOC107669038
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 25655765 ~ 25661625 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence


>XM_007235191.2
ATCTGATTGTGAACAAGATCAAACATAAACGTTAAACTTGctaaaacactttactgcagTGAGGGTTGAATAATTTTGAACACAATAATCTGAACACAATACCAGTTGTTATTGAAACAAATAACTGTATATTTTGTGATGATGTGGAAACAACTAatcatgtgtttatttattcaaatatacTATATGCATGTTCTTCgtacaataaaaaatgtttatctcCGGAACAAAGGGCAGAGTGTGTTTCTGCACGGACCTATTTAAAGGTAGAGCAGTGTACTATGAGCCGCATATACACAGCTGagtatgaatgaatgtaaaCATGCTGGAAGCTGAAAGCGGCTGCGGGGCTGAGGGTAACTCCGCGTATCGCTGGTGGAGTGTTTCAGTAAGATAACTGAATCAGTCAGTGTTAGTGAAGATCTTTAGTGAAGGCTGAGCGCGGGGACTGAGACGCACAGCAGCGTCTGTTTATCTGACTGTAGCTCTGGATGAGTGAGTTGAGTTGAATGGCGAACAGCAAAATGATTTGTATTAGAACTGTGTTTGCGTGCTGCGTGTGCTGATGTGTTTGTAGAATCTGAAATGGCATAGTATCAGTATTTACTAAGTTTTACCTTTACAGCCTTATGTGCAGTAAAATTTGGTGTAGCAGGTTTCCACTGAGAGCAGCTTTGGTGTTActgtaagttttattttttttgtaattggaaACAGTTAGTAGACTTTCACAATGCAGTCCAGTCAAATGTAGCTCAAATACAGCCTGTTGGAAGTCTGTACCAAGATTAGAATATCAACTAAGCACCAACTAAGGCTTAAGACCTAAAATATAAACGAGGCTACATCACAATGTCTGCATTTTGTGCAAAGAGCATTTTCCAAAGCCTCAGGTGCTCCATTCACAGAGTTTCAGTGTCAGTTCGATTGACACCATGCAGAACTTTTCTCATCAAACGGGGTCCACTTTTCTCTCAGACTCCCAAAGTGGCCCTGTTTTGTTGGGGTGTTGTTGGAAGTGTCGCATATGCCTCAGCACAGGAGGCAGTACTTCCTCAGAGGACTGCAGAGAAGAAGTCTTCAGTTGCCAGAGTGCAGGTCTACAGGCTCATTTTCTTCCTGAGACTAAGCATCCGTGCCTTGGTACTCCTGTTCAAGTTCACCCCCATCTTGCTGCTCTACCCCCTGACCCTTCTCTCACAGCGCTGGGCCTCCTGTTGGCTCAGTGCCCTGCTGTGGGTCACAGAGTCCTCTGGTCCGACGTTCATCAAGCTTGGTCAGTGGGCCAGCACACGACGGGACATCTTCTCCCAGGAGTTCTGTGACCGCTTTTCACGTCTCCATGTGAGAGTTCAGTCCCACTCCTGGGCTCACACTAAGCAATGTCTGAAGCGGGCCTTCGGTGAGGGCTGGAGGCAGCTGTTTGTGTTCGACAGCAAGGAGCCTGTCGGTTCAGGCTGTGTGGCACAAGTGTACAGGGCCAAGGCTCGAGTCTCGAGTGTGGAGGACCCGGCATTCCAGGAGTTGGTGGAGAGCCTTGAGAAAGAGGACCTGCTCGAAGCGTGGGAGATCCCTGGGCTTGGGAATGCTATAAACCACTGGTTGGGGTCGGAGCAGGTAGGGAAGGTGGAGGAGCTGTCAGAGGGCCAGGAGAGCACTGCTGAATTTCCATACACTCGTAGAAAGTACACAGAAGAGGATTGTCTCATGCCGGTGGCAATAAAGGTGCTTCATCCTGGCATCAGAAGACAAGTTCAAATAGACCTGATTCTTATGAAGGTGGGAAGCGTGCTCATCAGCTTCTTACCTGGCCTTAAGTGGCTCAGTCTGCCTGAGGTGGTGGATGAATTTGAGAAGCTCATGACCAAACAGATAGACCTTCGCTTTGAAGCAAGGAACATTGAACGGTTTAAGAATAACTTCAAGGACTTGGAATATGTCAAGTTTCCAACTCCATTGAGACCATTTGTCACCAGGACTGTCCTGGTGGAGACATATGAGgaaaGTGAACCCATTTCTAGTTACCTCAAATCGGAAGTTCCCGCAGCTGTCAAGCAGAGAATTGCCCGAATGGGAGTGGACACTCTGCTCAAAATGGTGTTTGTGGATAACTTTGTCCACGGAGACCTCCACCCAGGGAATATCCTAGTGCAGAGCGATCAGGGGGCTGGACCTCAAGACAGGGCCACCCTGACAGACCTGTGGGACACAGTGGTGGTCAGCATGAGGCCGACTCCTCCTCCGCTCCGACTGGTGCTGCTGGATGCTGGGATTGTGGCCCAGCTCAGTGAGAACGACCTGTGCAACCTGAGAGCGGTTTTCACTGCTGTTGCTCTCAGACAGGGAGAACGTGTAGCCGAGTTGATTCTGAAACATGCCAGGGCCAGTGAGTGCAAGGATGTGCCTCGATTCAAAAAGGAAATGTCTGAGCTTGTGAACCACGCACTCAGCGACACTCTTTCTCTGGGGAAGATTCAGGTGGCAGATCTGCTGTCTCGAGTGTTTGGATTGCTCATCCGCCATAAGGTGAAGCTGGAGAGTAACTTTGCTTCCGTTGTGTTTGCCATCATGGTACTGGAAGGCCTGGGCAGATCACTGGACCCTAACCTGGACCTGCTGGAGATCGCTAAGCCTCTGCTGCTGAAGAATTGTGCTTCACTTCTCTCCTGAGCTTCTGCATTGAACTGGGGCCACCTGAACACAATGAGCCTGTTTGCGTCCAGTTAGCTTTGACAAATGAGAAACATCTAGGGGATTAATTAGGAATGGATTGGTAATAGATTTTTAATTAGGCAAGGATAAATTGAGGGTTTAACAGGTGTTCattctgttaaaaataaaggtgcaaaTAAATCTACAGTAAATTTTTTAACTTACTCTGGGTCTTTCCCTTTGCCACTCCTTTACAATATCAACTGATGACCTCATTCTCTTGACTGGAATAAAAATTATGAACAATGAGGTACAGATACATTTTGATTTGAGTTACAGCCTAATCAAATTGAGAATTTCCCTAAGATTTGCATCTGAACGAAGTAATAATGAAAGGGTTCAggaaatgtgaacagtcaaggTTTTACACTAAGAATCCAGATGACATACATGCCCTAACAATGCAATGAAACCTAGAGGTCCACACATTCTTAGAAGCACTATTTGGTACACTGTGAATTTAATCCCAGTGAGAATAATTAGCCAGTAATATTCTAAAGTGTGAAAGTAGTGTTATTTATGTTGGTGTGTCTCATTTTATTGTGGGCAACCTCAGGGTTATACTTAAGCAGTCAGTGTCCTATGATACGGTAACTGATGTATAGACTTAATTTTAGACTGGAAAATTTTATCTAACatcagatttatcagtctatAAAACTGATGAAGTACAATCTTATATATTTTGCACAATTGTCTTGTATTATGTTCTGCATggctattttttcttttgccaaccccccaaaaaatccttatctattttgttttattgatttatttactttGTCGGTAAGAACATTTTGCTTTTCTGTGCTCAGACTCCTGTATTAAACGTGTTCACCAATACCAA

Function


symbol description
adck2 Predicted to enable ATP binding activity and protein kinase activity. Predicted to act upstream of or within protein phosphorylation. Orthologous to human ADCK2 (aarF domain containing kinase 2).

NR:

description
uncharacterized aarF domain-containing protein kinase 2

GO: NA

KEGG:

id description
K08869 ADCK, ABC1; aarF domain-containing kinase

RNA


RNA id representative length rna type GC content exon number start site end site
XM_007235191.2 True 3562 mRNA 0.45 8 25655765 25661625

Neighbor


gene id symbol gene type direction distance location
bbs4 bbs4,LOC107754319,LOC107701057 coding downstream 23994 25615420 ~ 25631771 (-)
LOC103047119 neo1,LOC108275206 coding downstream 93818 25351525 ~ 25561947 (-)
mpi mpi,LOC106560745,LOC106584640 coding downstream 328212 25317126 ~ 25327553 (-)
LOC103023960 kiaa1644,LOC108274641 coding downstream 554665 25013293 ~ 25101100 (-)
LOC107197705 NA coding downstream 705743 24949044 ~ 24950022 (-)
mrps35 mrps35 coding upstream 182992 25844617 ~ 25857522 (-)
cdkn1b NA coding upstream 411472 26073097 ~ 26077993 (-)
yars2 yars2 coding upstream 417751 26079376 ~ 26085001 (-)
LOC103026228 LOC108429453,LOC107558597,LOC107549599,LOC107701195,LOC107668648,LOC105913426 coding upstream 429637 26091262 ~ 26134844 (-)
LOC103029104 fbln1,LOC108429449,LOC108275342 coding upstream 729390 26391015 ~ 26438288 (-)
G76590 NA non-coding downstream 10608 25636972 ~ 25645157 (-)
LOC111193116 NA non-coding downstream 14632 25639947 ~ 25641133 (-)
LOC111193115 NA non-coding downstream 16632 25637072 ~ 25639133 (-)
G76585 adpgk,LOC107549595,LOC107745566,LOC107569355 non-coding downstream 40414 25612125 ~ 25615351 (-)
G76579 NA non-coding downstream 59102 25596425 ~ 25596663 (-)
G76595 NA non-coding upstream 51858 25713483 ~ 25713920 (-)
G76676 NA non-coding upstream 100897 25762522 ~ 25830697 (-)
G76701 NA non-coding upstream 416813 26078438 ~ 26079115 (-)
G76706 NA non-coding upstream 425727 26087352 ~ 26102108 (-)
G76707 NA non-coding upstream 484004 26145629 ~ 26146804 (-)
rab3il1 rab3il1,LOC108429468,LOC107549590 other downstream 353997 25282789 ~ 25301768 (-)
G76424 NA other downstream 471296 25184209 ~ 25184469 (-)
G76377 NA other downstream 735400 24914298 ~ 24920365 (-)
LOC103025724 tmem80 other downstream 857149 24791192 ~ 24798616 (-)
deaf1 deaf1,LOC107726848 other downstream 1395235 24240898 ~ 24260530 (-)
LOC103031319 coro2b,LOC108412540,LOC105018662,LOC107549656,LOC107738688 other upstream 1195004 26856629 ~ 26878862 (-)

Expression



Co-expression Network