LOC103041625 (ddah2,LOC108435833,LOC107660989,LOC106570066)


Basic Information

Item Value
gene id LOC103041625
gene name ddah2,LOC108435833,LOC107660989,LOC106570066
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 957420 ~ 972843 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007239718.3
cacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagtcatggCCAACGTGTGTCCGTACGGCCGCTTCACCCATGCCATCGTCAGGGGTATCCCCGAGTCGTTTGGGCAGCGAGCGGACGGTGGCGAGAGTGTGTCGGTGGACGTGGCGAAGGCCCAGAGACAGTTTGGGGTCCTGACCGGGGCCCTGAGGCAGAAGGTGGGCCTGCAGCTCATCGAGATCCCCGCCGACCCCGAACTCCCCGAGAGCTGGAGGATCGAGGACATAGCCGTCATTCAGGGAGACACGGCGCTCATCACACGACCCTTCAAACAGCAGAGACGTGCAGAGGCAGACGCAGTGAGGCGTGTGATGAACGAGCTGAATCTGACGGTGGTGGAGATGGGTGTGGAGGAGGGAGGGTCTGGAGGGGCCACTCTGGAGGGCAGTGATGTTCTCTTCACTGGGAGGGAGTTCTTCGTGGGAATTTCCAAACACACCAACCACAGAGGAGCTGAAGTTCTGGCTGATACGTTCAGGGACTTTGCTGTGTCCACAGTACCTGTGTGCGGAGGCTGTCGTCTGAAGAACATCTGCTCTATGGGAGGTCCTGAGACCATCGTCTTCAGTAACAGCGAGGGAGCGAAGAAAACCCAGCggATGATGGAGCAGTTGACTGATCATCACTACGACGTGTTATCTGTGTCTGAAGACGTGGCCTCCAACTGTGTGTACGTCCGCGGCCCGGCTAAAGTGGACTATCTGCTCCACCCGACAGCCGACGAGTGTCCAAACAGCATCACCGCCTTCCAGAAGCTCCCAGACTACACCCTTCTCCCCACAGCCTGCAGTGAGGCCTCCAAACTGGGAGGGGCGCTGTCCTCCTTCTGCCTGCTCATCAACAGGAAGCCCAACTATTCTTAAacccttttttaaaaatctttagaaatgtctaaaagcaataaataaacaattacattacaatacatc

Function

symbol description
ddah2 Predicted to enable amino acid binding activity and dimethylargininase activity. Predicted to be involved in arginine metabolic process; citrulline metabolic process; and positive regulation of nitric oxide biosynthetic process. Predicted to act upstream of or within arginine catabolic process. Orthologous to human DDAH2 (dimethylarginine dimethylaminohydrolase 2).

NR:

description
PREDICTED: N(G),N(G)-dimethylarginine dimethylaminohydrolase 2-like

GO:

id name namespace
GO:0005737 cytoplasm cellular_component
GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines molecular_function

KEGG:

id description
K01482 DDAH, ddaH; dimethylargininase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007239718.3 True 1015 mRNA 0.56 5 957420 972843

Neighbor

gene id symbol gene type direction distance location
LOC103041930 clic1,LOC108274855,LOC107660990,LOC107753388,LOC107708731,LOC107679037,LOC107564667 coding upstream 44898 899894 ~ 912522 (+)
LOC103042240 LOC103042240 coding upstream 80016 867909 ~ 877404 (+)
LOC103036550 NA coding upstream 179414 640691 ~ 778006 (+)
LOC111193065 NA coding upstream 547198 404610 ~ 410222 (+)
LOC103044001 NA coding upstream 680223 257979 ~ 277197 (+)
gpx3 LOC108415088 coding downstream 1717895 2690738 ~ 2701134 (+)
LOC103025734 LOC108439812,LOC108275395,LOC105903016,LOC107749739,LOC107653313,LOC107594883 coding downstream 1855566 2828409 ~ 2854104 (+)
LOC103021672 LOC108439811,LOC107749774,LOC107653301,LOC107594902 coding downstream 1885052 2857895 ~ 2866216 (+)
LOC103025421 n4bp3 coding downstream 1898733 2871576 ~ 2946729 (+)
LOC103047122 LOC108439803 coding downstream 2085681 3058524 ~ 3081939 (+)
G70372 NA non-coding upstream 22 950907 ~ 957398 (+)
G70366 NA non-coding upstream 19800 863521 ~ 937620 (+)
G70361 NA non-coding upstream 43237 913053 ~ 914183 (+)
G70345 NA non-coding upstream 175683 741336 ~ 781737 (+)
G70355 NA non-coding upstream 187653 768928 ~ 769767 (+)
G70373 NA non-coding downstream 47 972890 ~ 974277 (+)
G70374 rps5,LOC107086176 non-coding downstream 5720 978563 ~ 1019860 (+)
G70379 NA non-coding downstream 11902 984745 ~ 985851 (+)
G70405 NA non-coding downstream 115967 1088810 ~ 1123221 (+)
G70413 NA non-coding downstream 136816 1109659 ~ 1111771 (+)
LOC111193067 NA other upstream 102262 845025 ~ 855158 (+)
LOC103042548 NA other upstream 117206 794712 ~ 840214 (+)
LOC111193042 NA other upstream 636484 317331 ~ 320936 (+)
G70385 NA other downstream 32640 1005483 ~ 1005838 (+)
G70522 NA other downstream 295924 1268767 ~ 1269404 (+)
lrrtm2 lrrtm2,LOC107680618,LOC107750357,LOC103471148 other downstream 1116077 2088920 ~ 2193559 (+)
G70604 LOC108436838 other downstream 1386040 2358883 ~ 2359229 (+)
LOC103024487 syngap1a,LOC108275193,LOC108439800 other downstream 2149075 3121918 ~ 3292475 (+)

Expression


Co-expression Network