CI01000009_05724421_05725824


Basic Information

Item Value
gene id CI01000009_05724421_05725824
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 5723841 ~ 5725834 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000009_05724421_05725824.mRNA
AGTGCAGACAATGGATACGAAACAGGCAAAGTTTGTCTGGGCTGATGCCACTGAGTTCTTTTGGATCCTTATCCCAGCAGCGTCTCCTCTGTTGGTCTCCTCCAGTGCACCGGACTACTACGTTCTTACATGGGTGCCAGCATCAACACAAAGCAAAAGAACTCTTTCCAGTGTCAAGAGCATCACACAAGTCTTTTTAAAAACAAAAAAACAACAAAACAACAAAGGCAAGAAAGTGTCGCTGCGCATCATTTCGGTCGCCTGTGAGTTGACGGGCGTGAAGAGCAGAGAAGAGTTCGCTCCTGAGCGAAGAGTACGAGAAATCAGCACACATCCTGAGCGTTGCCGTATTTTTTGTTTTTCATTTATCCCACGCAGAGACTGCTTCGGGGGCCGTGCATTGCGTTTGGCCGCTACTTCCATTGGTCACTCCTCAGAACGTATTGGCAATGTTGTTTTCCGTGTTTGGTTGCTTGCTGTATACGACATAGCTGCAGAGCCAAGTGATCAGACCTGGAAAAACATCTGTAAAGAGAGAAAAAGAGAGAGTTAGCTTGGAATCACTTAAGGAAAGAGAGTGATGATTGCGCTAAAGAGGACCACAGTCTAAGTTTCTTGGAAGATGTGTGGCAGCTTTGCAGATGGAACAGAGAAAACAACATTTGGCGTTTGGGAAAAAATGAATTTTTAAGCATAGCCAGCTTTTTGCTCTGAAACTGGTGACAGATCGTTTTGAACGCATATCTTGCCAATGCAGTTAGCAGCAGAGCCTGTGCTGAGCCTTGCGCAAGAAATAATTTTTTGGGAGTATGACCACAAATCACAGCAAGCCTGTTTGAATTAGGAAATTATTTCAAGGCTGGAGGTGATATGGTATTGTTTAAACTGTGCGGCTGCATTAGGTATGTAGCACTTGAGTCATAGCGGTTGGTTTTTCGTAGTGGGCCATGGGCTTTTTTGTGTCATCATCAATTAAGCTCACATGTAACCGCTGCTGGTAGGAGTAATTCATAATAGTGCTTAGAAAATACAGTGTTGAGATGCCATTTCTACTTTACATTTATATGGCTGTGAGGATTACTGTATTACAGCCAAAAAAGTGTTGAAAGTGAATCTTAACTGGAATGAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000009_05724421_05725824.mRNA True 1133 mRNA 0.43 4 5723841 5725834

Neighbor

gene id symbol gene type direction distance location
CI01000009_05675971_05682578 NA coding downstream 40458 5675772 ~ 5683383 (-)
CI01000009_05571226_05587885 NA coding downstream 135826 5570501 ~ 5588015 (-)
CI01000009_05513478_05515588 NA coding downstream 208253 5513269 ~ 5515588 (-)
CI01000009_05402729_05410456 NA coding downstream 313385 5402504 ~ 5410456 (-)
CI01000009_05367161_05370504 PTPLB, HACD2, DKFZP459B2333 coding downstream 353337 5365766 ~ 5370504 (-)
CI01000009_05759177_05759509 NA coding upstream 33165 5758999 ~ 5759770 (-)
CI01000009_05784097_05785842 FZD5 coding upstream 58231 5784065 ~ 5785842 (-)
CI01000009_05798886_05836104 PLEKHM3 coding upstream 72048 5797882 ~ 5838430 (-)
CI01000009_05844758_05855489 IDH1 coding upstream 118294 5844128 ~ 5855944 (-)
CI01000009_05949578_05961385 ARMC8 coding upstream 223744 5949578 ~ 5961385 (-)
G53916 NA non-coding downstream 127163 5585039 ~ 5596678 (-)
G53566 NA non-coding downstream 170740 5552890 ~ 5553101 (-)
G53556 NA non-coding downstream 177204 5539205 ~ 5546637 (-)
G53552 NA non-coding downstream 184153 5523644 ~ 5539688 (-)
G53514 NA non-coding downstream 215052 5506972 ~ 5508789 (-)
G53988 NA non-coding upstream 4800 5730634 ~ 5730864 (-)
G53997 NA non-coding upstream 20741 5746575 ~ 5746788 (-)
G54000 NA non-coding upstream 26106 5751940 ~ 5752165 (-)
G54032 NA non-coding upstream 267351 5993185 ~ 5993404 (-)
G54065 NA non-coding upstream 293212 6019046 ~ 6019356 (-)
G53515 NA other downstream 218593 5502395 ~ 5505248 (-)
G52828 NA other downstream 1492372 4217420 ~ 4231469 (-)
CI01000009_03261739_03262843 NA other downstream 2461884 3261038 ~ 3262843 (-)
CI01000009_02885473_02893975 NA other downstream 2824434 2883688 ~ 2893975 (-)
G52410 NA other downstream 3161308 2551724 ~ 2562533 (-)
G55814 NA other upstream 2699987 8425821 ~ 8428012 (-)
CI01000009_08858198_08860555 NA other upstream 3132318 8856310 ~ 8860563 (-)
G59097 NA other upstream 6562383 12288217 ~ 12289518 (-)
CI01000009_13975122_13976026 NA other upstream 8249554 13975099 ~ 13978614 (-)
G59490 NA other upstream 8307730 14033564 ~ 14037873 (-)

Expression


Co-expression Network