dnajc8 (dnajc8,LOC102775708)


Basic Information

Item Value
gene id dnajc8
gene name dnajc8,LOC102775708
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 4943206 ~ 4954889 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007239848.3
GAGTCACGTGGTCACAGCGCTTCCGACGTCACCTGTGTGTATGTAAGATGGCGgctgcaggagctcctcagGCTCAGGGCAGTGGCTCTGGCGACGACTCGGCTTTCCAGACCTTTTATACGGAGGTGAAGCAGATAGAAAAGAGAGACTCTGTATTGACATCCAAACAGCAGATAGACAGGTTGCTGCGGCCTGGCTCGTCATATTTTAATCTAAACCCGTTTGAGgTTCTTCAGATTGATCCAGAAGCAACAGATGAAGAATTAAAGAAAAGGTTTCGACagTTGTCCATTTTGGTCCATCCAGACAAGAATCAGGATGATCCAGATAGAGCACAGCAGGCTTTCGAAGCGGTTGATAAGGCGTATAAACTTCTGTTGGACGGCGATCAGAAGAAGAGGGCTGTTGACGTGATCCATGCAGGAAAAGAATATGTGGAACATATGATGAGTCAGAAGAAGAAGCAGTTGAAGAAGGATGGGAAGTCCACAGATATAGAGGAGGATGATCCGGAAATGTTCAGGCAAGCTGTTTACAAACAGACCATGAAGCTTTTCGCTGAGCTGGAGATCAAGAGGAAGGAACGAGAAGCCAAGGAGATGCACGAGAGGAAAAGACAAAGAGAAGAGGAGATTGAAACACAAGAACGAGccaaacgagagagagagtggcagaAAAACTTTGAGGAAACGAGGGACGGCCGGGTGGACAGCTGGAGAACCTTCCAGGCCAAAGGCAAGActaagaaggagaagaagaaccgAACGTTCCTCAAGCCCCCGAAGGTCAAAATGGAGCAAAGAGAGTAAAATTAGTGTGTAGAAAGTTTAGAGATTAATACTGCCCTCCCTGCTCatccctctctttttcctttccaGCAATTCGTTCATTCAGGCCTATTTGTTTGCTGTTTAAAGAATGAATCAGCAAAATAATAAATCCACAGATTTACAAAAGTTTCCTCTTACCTGTACTGTAGTCAGATGAACTGGagcaagagaaaaaaggaggacGGCTGCCCGAGAATCTAATATTTTGTGGAACCGTTAGTTTAATCATAGAGAGCCTGTGGTTCAGGAGCATGATGCCCAGCAGGTGGCACTATGGTGCAGTattctccttccctccctctgcTTTTTTCATTGTCCACATTAGAGAGGTCTTGCAATTGAGCTGgagcattgtttaatattgtccgTCTCAGTAAATTAACCCAACATTGCAACCATCACCTCAACAGTCAGGCCTGTAGTGTGTCTAGGGTTtcgtttcattttttttttttttttttttttttaaataaatgtacatatctGTGAAATTTGTGACTCTTGAGAGACTTGGACATGATATACATATGTTGTGCACATAAGAAActagttatttttttctgctggtTAAAGTCTGCGAGTTTTTTTCGTCCGTTTTCTTTTTGTACCCTATTCACCCCAAAATAAAACTGGTTTGTAGTTTA

Function

symbol description
dnajc8 Predicted to be active in nucleus. Orthologous to human DNAJC8 (DnaJ heat shock protein family (Hsp40) member C8).

NR:

description
PREDICTED: dnaJ homolog subfamily C member 8

GO: NA

KEGG:

id description
K09528 DNAJC8; DnaJ homolog subfamily C member 8

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007239848.3 True 1474 mRNA 0.43 9 4943206 4954889

Neighbor

gene id symbol gene type direction distance location
hnrnpr hnrnpr,LOC103029778,LOC105909056 coding upstream 8141 4929177 ~ 4935065 (+)
LOC103029142 LOC108435612,LOC108274509,LOC107571533,LOC107571277,LOC107730909 coding upstream 58718 4857848 ~ 4884488 (+)
dpy19l4 dpy19l4 coding upstream 604124 4306665 ~ 4339082 (+)
LOC103045063 LOC108435620 coding upstream 727490 4132022 ~ 4215716 (+)
LOC103042852 LOC108274605,LOC108435589,LOC105028044 coding upstream 837243 3955008 ~ 4105963 (+)
LOC111193076 NA coding downstream 1390 4956279 ~ 4957026 (+)
LOC111193046 NA coding downstream 24578 4979467 ~ 4980022 (+)
cfap69 cfap69 coding downstream 93617 5048506 ~ 5067507 (+)
LOC103041177 sfxn1,LOC108435595,LOC108275306,LOC107668583,LOC107749734 coding downstream 114012 5068901 ~ 5082606 (+)
LOC103040455 sept8,LOC108435605,LOC103023804 coding downstream 136989 5091878 ~ 5117839 (+)
G71244 NA non-coding upstream 1089 4941409 ~ 4942117 (+)
G71215 NA non-coding upstream 98993 4744153 ~ 4844213 (+)
G71209 NA non-coding upstream 264484 4678331 ~ 4678722 (+)
G71201 NA non-coding upstream 320966 4621818 ~ 4622240 (+)
G71194 NA non-coding upstream 431809 4510801 ~ 4511397 (+)
G71248 NA non-coding downstream 3267 4958156 ~ 5006225 (+)
G71246 NA non-coding downstream 9082 4963971 ~ 4968919 (+)
G71256 NA non-coding downstream 35963 4990852 ~ 4993179 (+)
G71260 NA non-coding downstream 46202 5001091 ~ 5043758 (+)
G71287 nudcd2 non-coding downstream 178846 5133735 ~ 5137567 (+)
atpif1 atpif1,LOC105912502,LOC107571275,LOC104922170,LOC107730904,LOC103378180 other upstream 21386 4915813 ~ 4921820 (+)
LOC103028288 LOC108435610,LOC108275213,LOC106520856 other upstream 501275 4357065 ~ 4441931 (+)
LOC111193071 NA other upstream 1368448 3409670 ~ 3574758 (+)
G70846 NA other upstream 1564596 3377684 ~ 3378610 (+)
LOC103024487 syngap1a,LOC108275193,LOC108439800 other upstream 1650731 3121918 ~ 3292475 (+)
G71247 NA other downstream 1409 4956298 ~ 4980011 (+)
G71249 NA other downstream 8813 4963702 ~ 4967907 (+)
G71414 gstp1 other downstream 545019 5499908 ~ 5505638 (+)
LOC103037414 NA other downstream 717829 5672718 ~ 5678874 (+)
LOC103043949 ppp3cb,LOC108274683,LOC107660165,LOC107758531,LOC107680292,LOC107589094 other downstream 916201 5871090 ~ 5957019 (+)

Expression


Co-expression Network