CI01000009_05759177_05759509


Basic Information

Item Value
gene id CI01000009_05759177_05759509
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 5758999 ~ 5759770 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000009_05759177_05759509.mRNA
AGTCCTAAAACATTGCAATATAATCAGGGCGTGCCCAATAAATCGCACAATGCATCAAGGACATTAGAGAAGATTAAATAATTCCTGAATGATATAAGAGTATTACACCCTGATTCCACCAGGCAGCACACATTTGGTCTAACCAGGGTGAGAAAGAAGCCAACAAAAAGGGGAAACCCCACATATATGAACTGCGAAGATGCATAAAGAAAACCAGAGATGGTGTGCATCCATATTTCGTAGCATTTTAAATGATCAGCCATGCATCAAAATTTCCCACCCTGGGTTTGTGTTGCTCTCCCGTTTGCCTCCCCTCCCTCTGCATGCAACAACTACAGCCGCCATGATCTCTTTGTTTCCAACGGGCCGAACCCAAACCAGACTTATATGCCATTCGGGACGAGCCCTTTCCCTCCGGACACTTGTCTCCTCTTACCGATACAGACTCCCTCCGTCACTCTCGAGCCCTCGGAGCTCCACTTTTATTCAGGCCGACACGTAAGAGACCGCGTCAGGCTACACCTCCGTCGCGTCACCGAGAACAACAACACAGAGAACGAGACGAAAATCCGATCATCAACCCCACTGCACTGAGCGAGAGCGGCCGAGAGCGTGGCGGAAAAAGCCGAGTGGTGACGATTACAGACGAAGCGTGGCCGAAGCTTGGCGAAATAATGCGAATACGACACACTTACAAGATTTTGTGAATGAATCTCGACAAATGTTTTTAAAAACAGAAAATTGTTTAGTATACATAGAAACATCAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000009_05759177_05759509.mRNA True 772 mRNA 0.47 1 5758999 5759770

Neighbor

gene id symbol gene type direction distance location
CI01000009_05724421_05725824 NA coding downstream 33165 5723841 ~ 5725834 (-)
CI01000009_05675971_05682578 NA coding downstream 75616 5675772 ~ 5683383 (-)
CI01000009_05571226_05587885 NA coding downstream 170984 5570501 ~ 5588015 (-)
CI01000009_05513478_05515588 NA coding downstream 243411 5513269 ~ 5515588 (-)
CI01000009_05402729_05410456 NA coding downstream 348543 5402504 ~ 5410456 (-)
CI01000009_05784097_05785842 FZD5 coding upstream 24295 5784065 ~ 5785842 (-)
CI01000009_05798886_05836104 PLEKHM3 coding upstream 38112 5797882 ~ 5838430 (-)
CI01000009_05844758_05855489 IDH1 coding upstream 84358 5844128 ~ 5855944 (-)
CI01000009_05949578_05961385 ARMC8 coding upstream 189808 5949578 ~ 5961385 (-)
CI01000009_05977117_05981366 CDC25C.L, RAB5D, RAB5D.S, RAB5B coding upstream 216343 5976113 ~ 5982698 (-)
G54000 NA non-coding downstream 6834 5751940 ~ 5752165 (-)
G53997 NA non-coding downstream 12211 5746575 ~ 5746788 (-)
G53988 NA non-coding downstream 28135 5730634 ~ 5730864 (-)
G53916 NA non-coding downstream 162321 5585039 ~ 5596678 (-)
G53566 NA non-coding downstream 205898 5552890 ~ 5553101 (-)
G54032 NA non-coding upstream 233415 5993185 ~ 5993404 (-)
G54065 NA non-coding upstream 259276 6019046 ~ 6019356 (-)
G54068 NA non-coding upstream 262843 6022613 ~ 6022827 (-)
G54077 NA non-coding upstream 281688 6041458 ~ 6041667 (-)
CI01000009_06046712_06060022 NA non-coding upstream 294414 6045874 ~ 6060442 (-)
G53515 NA other downstream 253751 5502395 ~ 5505248 (-)
G52828 NA other downstream 1527530 4217420 ~ 4231469 (-)
CI01000009_03261739_03262843 NA other downstream 2497042 3261038 ~ 3262843 (-)
CI01000009_02885473_02893975 NA other downstream 2859592 2883688 ~ 2893975 (-)
G52410 NA other downstream 3196466 2551724 ~ 2562533 (-)
G55814 NA other upstream 2666051 8425821 ~ 8428012 (-)
CI01000009_08858198_08860555 NA other upstream 3098382 8856310 ~ 8860563 (-)
G59097 NA other upstream 6528447 12288217 ~ 12289518 (-)
CI01000009_13975122_13976026 NA other upstream 8215618 13975099 ~ 13978614 (-)
G59490 NA other upstream 8273794 14033564 ~ 14037873 (-)

Expression


Co-expression Network