LOC103033388 (LOC103033709,LOC108428427,LOC105941050,LOC101483816,LOC102290823)


Basic Information

Item Value
gene id LOC103033388
gene name LOC103033709,LOC108428427,LOC105941050,LOC101483816,LOC102290823
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 20903078 ~ 20905520 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007244272.3
TATAAAAAGCCTGACTCTGTCAAACTGCAACAGGCAGAAAACATGGCTTTTTTGTGGATCGTCTCCTGTCTTGCCTTCATTGGCACGGCCTACGGTTGTGGTGCTCCTGCCATTCCCCCTGTGATCACTGGCTATGCCAGGATTGTGAACGGTGAGGAGGCAGTGCCCCACTCCTGGCCCTGGCAGGTGTCTCTGCAGGACAGCACTGGTTGGCACTTCTGCGGCGGCTCCCTCGTTAACCAAAACTGGGTGGTGACTGCTGCTCACTGTGGCGTCAGAACATCCCACTATGTGATCCTGGGAGAGCATGACCGCTCCTCTAACGCTGAGGCCATCCAGACCTTGCGCATTGGAAAGGTTATCCAGCATCCCAGCTACAATTCCAACACCATCAACAATGACATCACCCTGGTCAAGCTGGCCAGTACTGCCCAGCTCAACACCCGTGTGTCTCCTGTGTGTCTCCCTGCTTCCAGCGATGACTACGCAGGAGGCCTGAAGTGTGTCACAACTGGCTGGGGCCTGACCAGATACAATGCTGCAAACACTCCACCTCGTCTGCAGCAGACCGCTCTGCCTCTGCTTACCAACAGTAACTGCCAGCGTTACTGGGGCACCTCGATCACAAGTGTCATGATCTgcgctggagctgctggagcttccTCCTGCATGGGTGACTCTGGTGGTCCTCTGGTCTGCCAAAAGGGTGGAGTTTGGAACCTGGTGGGTGTTGTATCCTGGGGCAGCAGTACCTGCAGCACCTCCTCACCTGGAGTGTATGCTCGGGTCACCAGTTTCCGCTCATGGATTGACCAGACCATCGCCTCCAACTAAAGCTTTGAGAGCCATGTGGACTCAAACCCAGTTTTTGGGTTCCTTTACTTTCTGAATAAAGATGAGATAACataaa

Function

NR:

description
chymotrypsinogen A-like

GO: NA

KEGG:

id description
K01310 CTRB; chymotrypsin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007244272.3 True 910 mRNA 0.54 7 20903078 20905520

Neighbor

gene id symbol gene type direction distance location
trnat-agu_2 NA coding downstream 6902 20896103 ~ 20896176 (-)
LOC103032734 LOC108428429,LOC108275416,LOC107577622,LOC107566260,LOC107682256 coding downstream 25699 20869687 ~ 20877379 (-)
ankrd27 ankrd27 coding downstream 39763 20840504 ~ 20863315 (-)
LOC103029688 si:ch1073-174d20.1,dbndd1,LOC108428370,LOC108275320,LOC107723994,LOC107742629,LOC107559144,LOC107570651 coding downstream 649255 20243366 ~ 20253823 (-)
LOC103045029 LOC108428372 coding downstream 696380 20192525 ~ 20206698 (-)
LOC103033709 LOC103033709,LOC108428427,LOC105941050,LOC101483816 coding upstream 3359 20908879 ~ 20910858 (-)
LOC103034889 LOC108428424,LOC108274948 coding upstream 18218 20923738 ~ 20928274 (-)
LOC103036040 ankrd26,LOC108428422 coding upstream 34398 20939918 ~ 20974749 (-)
LOC103038341 LOC108428358 coding upstream 98533 21004053 ~ 21007646 (-)
morc2 morc2,LOC107674835 coding upstream 116446 21021966 ~ 21042030 (-)
G75295 NA non-coding downstream 108119 20794484 ~ 20794959 (-)
G75286 NA non-coding downstream 333721 20568847 ~ 20569357 (-)
G75270 NA non-coding downstream 600533 20301885 ~ 20302545 (-)
G75243 LOC108428369,LOC107701578,LOC107742623,LOC107559153,LOC107723981,LOC107570647,LOC107688789 non-coding downstream 618436 20278476 ~ 20284642 (-)
G75265 NA non-coding downstream 626634 20272775 ~ 20276444 (-)
G75357 LOC108428367 non-coding upstream 7311 20912831 ~ 20914086 (-)
G75366 NA non-coding upstream 73882 20979402 ~ 20985652 (-)
G75367 NA non-coding upstream 80674 20986194 ~ 20986762 (-)
G75419 NA non-coding upstream 136587 21042107 ~ 21066403 (-)
G75426 chid1,LOC107674841,LOC107655144 non-coding upstream 155938 21061458 ~ 21063620 (-)
LOC103032014 maf,LOC108428434,LOC108274756,LOC102790406,LOC102298902,LOC101477682,LOC102192535,LOC101173775,LOC100702616,LOC107663990,LOC107565340 other downstream 154870 20622641 ~ 20748208 (-)
hsd17b12 hsd17b12,hsd17b12a,LOC107661451,LOC107696265,LOC107573907,LOC107716735,LOC107753600 other downstream 802828 20084428 ~ 20100250 (-)
G75207 api5,LOC107696269,LOC107753602 other downstream 871051 20027162 ~ 20032027 (-)
G75100 LOC108436948,LOC108275266 other downstream 1037096 19859694 ~ 19865982 (-)
G74838 wasl,LOC105896696,LOC108275301 other downstream 1830190 19070938 ~ 19072888 (-)
gatd1 pddc1,LOC102788149 other upstream 159799 21065319 ~ 21071246 (-)
LOC111193105 LOC102794092,LOC108274651,LOC107571202,LOC108428364 other upstream 363984 21269504 ~ 21273017 (-)
LOC103024007 LOC108428399 other upstream 1537216 22442736 ~ 22574013 (-)
LOC103033738 LOC103033738,LOC108444230,LOC106560753,LOC105008418,LOC108274439,LOC107549618,LOC107686877 other upstream 2419057 23324577 ~ 23366216 (-)
LOC103042310 ucmab,ucma,LOC107720768,LOC107569716,LOC107673257,LOC108275358,LOC107559968 other upstream 2921694 23827214 ~ 23833068 (-)

Expression


Co-expression Network