bnip2 (bnip2,LOC107703138)


Basic Information

Item Value
gene id bnip2
gene name bnip2,LOC107703138
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 16814916 ~ 16829981 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007246489.3
AGTTGAGTTCGCGTTATACCGGAGAGTCCCTGAAACTGCGGAGCTGCTGCGGTGGACGGTCAGGAAATGATGTTCCTGACAGACTTTTAGAGAGGTTTCAGAGTCAGACAGCGGTTAACTGGGTACCATAACTGTGTAGACGGAGAGCGGGTGTGTGAAATGAGGTGTTGTGGGTCTCGGTGAGCGGGGTTTTGAGTGTGTATCGCTGCTCTGTTGCTGTCAGTCAGCGCCGGGCTGGGCTGTGCTGTGGATCGGCGataggaaggaaggaaggaggggaagaagggaGCCTGCGCACTGCGGGGCCACGGAGCGGACTGGAAGAGACACTTTTCGGGAAGTTTGTTTGGAGAGTTGTTTAGTTCTTGAACTATGCTATTGTTACACAAATTGGTTGCCAAGTAGTTTgtatttagctaactaagtttACACAGTTAAAGTCGGCTGGCTCGATGTTTGGCAGGAGTAGCGTTAGGTTAGGTGGGTGAAGATTTGATTATTTGTACGGTGCGAGTTGTTTCGCTGACTTTGGCTAgccagctagttagctagcgttagctactctAGCTCCCCTAGCTGTCTGTGTCTGTTGCTGGGCTTCAGTTGTCACACTGGGCACGCACTGCTTGGTGAAGgaggtttttattattgttgttcagtaggttagctagttagttaactGCGTTTTTAACCTGTCCACCCCCTATGGCCACAGATGTGACTGAGGGTGAAGGAGGCTTAAAACAAAGTGGTAACCTTACAGCCGCTGTGATTATGAACAAAAGCAGCTCCGAGTCAGACACACCCAGGACACTGGAAACGCTGGAAAACAAGCCGACAGGTCTCCACTCGTCACCGTCTGAACCGGGAAACGGTGCGAGTAAGGCCGCCGTGGTGTCTGTGGAGAACGGGGACAGAGCAGCCCAAAACAGGCCCACAAAAACAGGAGACCCGCTACAGGAAACTGCAGCTCCGCACGATGGAGGAAAACAGGAGAGGACACGGACCCAGCAGCCCTCGAGTCCTGTTAAACTACCACAGGCACAGAGCTCACCCGTGGAGCACAATGGAAGTTTTGAGCAACAGGAGTCGGTCGCTACCACAGAAGCTCGATTGAGAatggaaggggtggagctaaaaGAAGAATGGCAAGATGAAGACTTCCCCAGACCTCTACCTGAAGAAGAAGACATTCAACTTGATGACGATCTCTTCCCTGGAGAGGGAGATTCTGCCCCACAATCATATGGATCGAACAGTGGAAAAAGAACGAAAAGGAGGCTGTTGGCCCCAGATATCAGTCTGAATCTAGATCGCAGCGAGGGCTCAGTGCTCTCTGACGAGCTGGATGAAAGCACAGAGTTAGACCTGGATGGCATGGACACCCCCTCAGACAACAGCAACGAGTTTGAATGGGAAGATGATCTTCCAAAGCCCAAGAGCACAGACCTCCTGCAGAAAGGTGTAGAGTCAGTGAGAGAGTACTCTGCCTCTGAGGAACGTGACGAGGGCAGACGCTGGAGGATCTTCCGTATTGGCGATCAGGAGCACAGGGTGGATATGAAGGCTATCGAACCCTACAAAAGAGTTATCAGCCACGGAGGATATTACGGAGATGGACTGAATGCTATCATCGTCTTTGCAGTTTGCTTTATGCCTGAGAGCAATCAACCAAACTATAGATACATAATGGACAATCTTTTCAAGTATGTGATAGGCactctggagctgctggtggcAGAGAACTATATGATTGTGTACCTAAACGGTGCAACTTCTCGTCGTAAGATGCCCAGCGTGGGCTGGCTTAGGAAATGCTATCAGCAGATAGACCGGAGGTTAAGAAAGAATCTCAAGTCTTTGATAATCGTCCATCCCTCTTGGTTCATTCGCACTCTCCTCACCCTCacaaaaccctttataagCTCAAAATTTACCCAAAAAATTAGGTTTGTGTACAGCCTGACAGAACTGGCTGAACTTGTTCCAATGGAATATGTGTCAATACCAGATTGCATCAAGCAGtttgatgaagaaaaaaataggaaaacacATAAAAGGATCGACCAAGACATGCGTGGCAAAGTGGAGATTGGAACCGCAGCAGTGCCGGAGTGAAAGTGAAGAAGAGCGGAATAAGAAGTGGATGACaagaatgttattttttttatgtatgttctCTCAGCTGGAAAATGTTAGTGCCTTTCAAGACTGTGTTGCCTGTTACATGGTGAAATTTTTAATCTTTATTGTAAAAGTGTGCCAAACATTGGTCAAAATCTTGATGTGCTTTAAGCATTTTTATAACCTCTCATGTATGAACTGATTTGTCATTTTTCAAGGAATCCTGTCTCTCGCTCCTATTTAAGGCACTTTGTTTAAGATAGGGGATGCATGTTGTactatgttacatttaaatatatatttatattcaaatgGTGATAAAGGAgagatattaatatatatatatattttttttgcatttggaCAGTCCTGTTTGGTGTTACGGTTGTTTAGTGAAATCTCACAGCGTCATACCTGTTACTGTTTACTGCTTGTTTTGATCTCATATGAGGAAAGCTTTGTGTTGTCCTCTTCCTGTCTGTCCACTGAAAGGGAGGATAAGAAAAGGATGGAACCATTAGTTTACTGTAAGTTTTAGTCACAGGTTGTACTGAATGAATCACGTCATTTGAATTCTGTAGTTCACATTTGTCAAAAAAATTGTTTGGGTGTGGGCTCTTGTATAATATTTCCTTGCAAGTAAACTTCCACACAAAAGGCTGGTCGtttttataa
>XM_007246490.3
GTTGAGTTCGCGTTATACCGGAGAGTCCCTGAAACTGCGGAGCTGCTGCGGTGGACGGTCAGGAAATGATGTTCCTGACAGACTTTTAGAGAGGTTTCAGAGTCAGACAGCGGTTAACTGGGTACCATAACTGTGTAGACGGAGAGCGGGTGTGTGAAATGAGGTGTTGTGGGTCTCGGTGAGCGGGGTTTTGAGTGTGTATCGCTGCTCTGTTGCTGTCAGTCAGCGCCGGGCTGGGCTGTGCTGTGGATCGGCGataggaaggaaggaaggaggggaagaagggaGCCTGCGCACTGCGGGGCCACGGAGCGGACTGGAAGAGACACTTTTCGGGAAGTTTGTTTGGAGAGTTGTTTAGTTCTTGAACTATGCTATTGTTACACAAATTGGTTGCCAAGTAGTTTgtatttagctaactaagtttACACAGTTAAAGTCGGCTGGCTCGATGTTTGGCAGGAGTAGCGTTAGGTTAGGTGGGTGAAGATTTGATTATTTGTACGGTGCGAGTTGTTTCGCTGACTTTGGCTAgccagctagttagctagcgttagctactctAGCTCCCCTAGCTGTCTGTGTCTGTTGCTGGGCTTCAGTTGTCACACTGGGCACGCACTGCTTGGTGAAGgaggtttttattattgttgttcagtaggttagctagttagttaactGCGTTTTTAACCTGTCCACCCCCTATGGCCACAGATGTGACTGAGGGTGAAGGAGGCTTAAAACAAAGTGGTAACCTTACAGCCGCTGTGATTATGAACAAAAGCAGCTCCGAGTCAGACACACCCAGGACACTGGAAACGCTGGAAAACAAGCCGACAGGTCTCCACTCGTCACCGTCTGAACCGGGAAACGGTGCGAGTAAGGCCGCCGTGGTGTCTGTGGAGAACGGGGACAGAGCAGCCCAAAACAGGCCCACAAAAACAGGAGACCCGCTACAGGAAACTGCAGCTCCGCACGATGGAGGAAAACAGGAGAGGACACGGACCCAGCAGCCCTCGAGTCCTGTTAAACTACCACAGGCACAGAGCTCACCCGTGGAGCACAATGGAAGTTTTGAGCAACAGGAGTCGGTCGCTACCACAGAAGCTCGATTGAGAatggaaggggtggagctaaaaGAAGAATGGCAAGATGAAGACTTCCCCAGACCTCTACCTGAAGAAGAAGACATTCAACTTGATGACGATCTCTTCCCTGGAGAGGGAGATTCTGCCCCACAATCATATGGATCGAACAGTGGAAAAAGAACGAAAAGGAGGCTGTTGGCCCCAGATATCAGTCTGAATCTAGATCGCAGCGAGGGCTCAGTGCTCTCTGACGAGCTGGATGAAAGCACAGAGTTAGACCTGGATGGCATGGACACCCCCTCAGACAACAGCAACGAGTTTGAATGGGAAGATGATCTTCCAAAGCCCAAGAGCACAGACCTCCTGCAGAAAGGTGTAGAGTCAGTGAGAGAGTACTCTGCCTCTGAGGAACGTGACGAGGGCAGACGCTGGAGGATCTTCCGTATTGGCGATCAGGAGCACAGGGTGGATATGAAGGCTATCGAACCCTACAAAAGAGTTATCAGCCACGGAGGATATTACGGAGATGGACTGAATGCTATCATCGTCTTTGCAGTTTGCTTTATGCCTGAGAGCAATCAACCAAACTATAGATACATAATGGACAATCTTTTCAAGTATGTGATAGGCactctggagctgctggtggcAGAGAACTATATGATTGTGTACCTAAACGGTGCAACTTCTCGTCGTAAGATGCCCAGCGTGGGCTGGCTTAGGAAATGCTATCAGCAGATAGACCGGAGGTTAAGAAAGAATCTCAAGTCTTTGATAATCGTCCATCCCTCTTGGTTCATTCGCACTCTCCTCACCCTCacaaaaccctttataagCTCAAAATTTACCCAAAAAATTAGGTTTGTGTACAGCCTGACAGAACTGGCTGAACTTGTTCCAATGGAATATGTGTCAATACCAGATTGCATCAAGCAGATCGACCAAGACATGCGTGGCAAAGTGGAGATTGGAACCGCAGCAGTGCCGGAGTGAAAGTGAAGAAGAGCGGAATAAGAAGTGGATGACaagaatgttattttttttatgtatgttctCTCAGCTGGAAAATGTTAGTGCCTTTCAAGACTGTGTTGCCTGTTACATGGTGAAATTTTTAATCTTTATTGTAAAAGTGTGCCAAACATTGGTCAAAATCTTGATGTGCTTTAAGCATTTTTATAACCTCTCATGTATGAACTGATTTGTCATTTTTCAAGGAATCCTGTCTCTCGCTCCTATTTAAGGCACTTTGTTTAAGATAGGGGATGCATGTTGTactatgttacatttaaatatatatttatattcaaatgGTGATAAAGGAgagatattaatatatatatatattttttttgcatttggaCAGTCCTGTTTGGTGTTACGGTTGTTTAGTGAAATCTCACAGCGTCATACCTGTTACTGTTTACTGCTTGTTTTGATCTCATATGAGGAAAGCTTTGTGTTGTCCTCTTCCTGTCTGTCCACTGAAAGGGAGGATAAGAAAAGGATGGAACCATTAGTTTACTGTAAGTTTTAGTCACAGGTTGTACTGAATGAATCACGTCATTTGAATTCTGTAGTTCACATTTGTCAAAAAAATTGTTTGGGTGTGGGCTCTTGTATAATATTTCCTTGCAAGTAAACTTCCACACAAAAGGCTGGTCGtttttataa
>XM_022672207.1
AGTTGAGTTCGCGTTATACCGGAGAGTCCCTGAAACTGCGGAGCTGCTGCGGTGGACGGTCAGGAAATGATGTTCCTGACAGACTTTTAGAGAGGTTTCAGAGTCAGACAGCGGTTAACTGGGTACCATAACTGTGTAGACGGAGAGCGGGTGTGTGAAATGAGGTGTTGTGGGTCTCGGTGAGCGGGGTTTTGAGTGTGTATCGCTGCTCTGTTGCTGTCAGTCAGCGCCGGGCTGGGCTGTGCTGTGGATCGGCGataggaaggaaggaaggaggggaagaagggaGCCTGCGCACTGCGGGGCCACGGAGCGGACTGGAAGAGACACTTTTCGGGAAGTTTGTTTGGAGAGTTGTTTAGTTCTTGAACTATGCTATTGTTACACAAATTGGTTGCCAAGTAGTTTgtatttagctaactaagtttACACAGTTAAAGTCGGCTGGCTCGATGTTTGGCAGGAGTAGCGTTAGGTTAGGTGGGTGAAGATTTGATTATTTGTACGGTGCGAGTTGTTTCGCTGACTTTGGCTAgccagctagttagctagcgttagctactctAGCTCCCCTAGCTGTCTGTGTCTGTTGCTGGGCTTCAGTTGTCACACTGGGCACGCACTGCTTGGTGAAGgaggtttttattattgttgttcagtaggttagctagttagttaactGCGTTTTTAACCTGTCCACCCCCTATGGCCACAGATGTGACTGAGGGTGAAGGAGGCTTAAAACAAAGTGGTAACCTTACAGCCGCTGTGATTATGAACAAAAGCAGCTCCGAGTCAGACACACCCAGGACACTGGAAACGCTGGAAAACAAGCCGACAGGTCTCCACTCGTCACCGTCTGAACCGGGAAACGGTGCGAGTAAGGCCGCCGTGGTGTCTGTGGAGAACGGGGACAGAGCAGCCCAAAACAGGCCCACAAAAACAGGAGACCCGCTACAGGAAACTGCAGCTCCGCACGATGGAGGAAAACAGGAGAGGACACGGACCCAGCAGCCCTCGAGTCCTGTTAAACTACCACAGGCACAGAGCTCACCCGTGGAGCACAATGGAAGTTTTGAGCAACAGGAGTCGGTCGCTACCACAGAAGCTCGATTGAGAatggaaggggtggagctaaaaGAAGAATGGCAAGATGAAGACTTCCCCAGACCTCTACCTGAAGAAGAAGACATTCAACTTGATGACGATCTCTTCCCTGGAGAGGGAGATTCTGCCCCACAATCATATGGATCGAACAGTGGAAAAAGAACGAAAAGGAGGCTGTTGGCCCCAGATATCAGTCTGAATCTAGATCGCAGCGAGGGCTCAGTGCTCTCTGACGAGCTGGATGAAAGCACAGAGTTAGACCTGGATGGCATGGACACCCCCTCAGACAACAGCAACGAGTTTGAATGGGAAGATGATCTTCCAAAGCCCAAGAGCACAGACCTCCTGCAGAAAGGTGTAGAGTCAGTGAGAGAGTACTCTGCCTCTGAGGAACGTGACGAGGGCAGACGCTGGAGGATCTTCCGTATTGGCGATCAGGAGCACAGGGTGGATATGAAGGCTATCGAACCCTACAAAAGAGTTATCAGCCACGGAGGATATTACGGAGATGGACTGAATGCTATCATCGTCTTTGCAGTTTGCTTTATGCCTGAGAGCAATCAACCAAACTATAGATACATAATGGACAATCTTTTCAAGTATGTGATAGGCactctggagctgctggtggcAGAGAACTATATGATTGTGTACCTAAACGGTGCAACTTCTCGTCGTAAGATGCCCAGCGTGGGCTGGCTTAGGAAATGCTATCAGCAGATAGACCGGAGGTTAAGAAAGAATCTCAAGTCTTTGATAATCGTCCATCCCTCTTGGTTCATTCGCACTCTCCTCACCCTCacaaaaccctttataagCTCAAAATTTACCCAAAAAATTAGGTTTGTGTACAGCCTGACAGAACTGGCTGAACTTGTTCCAATGGAATATGTGTCAATACCAGATTGCATCAAGCAGtttgatgaagaaaaaaataggaaaacacATAAAAGaatcTACAGATTTGGATGCTGATGTAATTTCTGCACT

Function

symbol description
bnip2 Predicted to enable exopolyphosphatase activity. Predicted to be involved in apoptotic process and polyphosphate catabolic process. Predicted to be active in cytoplasm. Orthologous to human BNIP2 (BCL2 interacting protein 2).

NR:

description
BCL2/adenovirus E1B 19 kDa protein-interacting protein 2-like

GO: NA

KEGG:

id description
K18448 BNIP2; BCL2/adenovirus E1B 19 kDa protein-interacting protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007246489.3 True 2799 mRNA 0.46 11 16814916 16829981
XM_007246490.3 False 2762 mRNA 0.46 10 16814916 16829980
XM_022672207.1 False 2097 mRNA 0.49 11 16817642 16829981

Neighbor

gene id symbol gene type direction distance location
otud7a otud7a,si:dkey-37f18.2,LOC107715690,LOC107752330,LOC107659507,LOC107550219,LOC107698115,LOC107598848,LOC108275340 coding downstream 76251 16618151 ~ 16738665 (-)
LOC103042575 LOC108433637 coding downstream 286829 16489647 ~ 16528087 (-)
acsbg1 NA coding downstream 357162 16447496 ~ 16457754 (-)
cib2 cib2,LOC103027299,LOC107573330,LOC107752320,LOC101476243 coding downstream 400571 16384549 ~ 16414345 (-)
tbc1d2b tbc1d2b,LOC107698183,LOC102789207 coding downstream 464752 16317884 ~ 16350164 (-)
LOC103044821 anxa2,LOC108433632,LOC107739086,LOC107724175,LOC107659511,LOC107550215 coding upstream 128593 16958574 ~ 16965560 (-)
ice2 NA coding upstream 136801 16966782 ~ 16988490 (-)
LOC103045127 rora,roraa,LOC108433630,LOC106561150,LOC106573506,LOC103141220 coding upstream 162930 16992911 ~ 17425461 (-)
LOC103045440 zgc:162595,LOC108433606,LOC108275248 coding upstream 758047 17588028 ~ 17600473 (-)
etfa etfa,LOC107712526,LOC107557988 coding upstream 1131714 17961695 ~ 17975485 (-)
G74368 NA non-coding downstream 13865 16797045 ~ 16801051 (-)
G74306 NA non-coding downstream 28877 16770442 ~ 16786039 (-)
G74295 NA non-coding downstream 67394 16743060 ~ 16747522 (-)
G74286 NA non-coding downstream 124559 16659503 ~ 16690357 (-)
G74285 NA non-coding downstream 173260 16640842 ~ 16641656 (-)
G74407 NA non-coding upstream 424936 17254917 ~ 17255289 (-)
G74447 NA non-coding upstream 975354 17805335 ~ 17813965 (-)
G74556 tpm1,LOC108441842 non-coding upstream 1015145 17845126 ~ 17866138 (-)
G74599 slc27a2,LOC108414297 non-coding upstream 1388308 18218289 ~ 18227676 (-)
G74640 NA non-coding upstream 1520650 18350631 ~ 18350936 (-)
LOC103041134 rps27l,zgc:136826,LOC107752326,LOC107598918,LOC101156845 other downstream 344593 16467089 ~ 16470323 (-)
LOC103046265 pkp3 other downstream 1034238 15758303 ~ 15780678 (-)
LOC103040324 NA other downstream 1400303 15381329 ~ 15414613 (-)
LOC103037068 cpne8,LOC108274474,LOC107679956,LOC107752477,LOC107723993,LOC105026415,LOC106561599,LOC105028206 other downstream 1600632 15123814 ~ 15214284 (-)
hbp1 hbp1,LOC107732286,LOC107701066 other downstream 2017633 14709058 ~ 14797283 (-)
nrg4 NA other upstream 1047045 17877026 ~ 17885395 (-)
G74591 isl2,LOC105022634 other upstream 1152766 17982747 ~ 18029747 (-)
G74791 NA other upstream 2109193 18939174 ~ 18940464 (-)
LOC103034453 LOC108436916,LOC107753633,LOC107659484,LOC107573489,LOC107752304,LOC108181664,LOC107598834 other upstream 2162687 18992668 ~ 19008366 (-)
G74838 wasl,LOC105896696,LOC108275301 other upstream 2240957 19070938 ~ 19072888 (-)

Expression


Co-expression Network