LOC103034129


Basic Information

Item Value
gene id LOC103034129
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 18970412 ~ 18973313 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007246550.2
AAGATCGTGTATAACTTCCCAGTGAGGAACTCCTATTTTTTACTATAATTAAGTCACCACGTGAACGTAGCATCAATTAGCAGGTGCAGGAGATTATGATAATGAGAATGAGGTACAACGGTAATCCTAGGAAGACATGGGCCATGGGAGAAGAGGAGCTGGTGTGAATGAAATTCAGTTGCTGATCCAGTTTGCTGTTGAGCAACTAGTGCTGGGACTTTAACTTTTTGgtGCTGATGAACCATAACATGATGTTCTTTAGTAACTTGATGTATGCCCATTACTGCTGGACTGTGATCACTGCTTCTCTGATGCCAGGTTtcccttttgtgtttgtgtggaatGCTCCTACAGAACTCTGCAGGAGTCGATTTAGCTTTGAGCTAGATCTGTCTTACTTCCAAATTGTGAGCAGCACATTAAAGACAGCCACTAATCAAAGGGTCTCCATCTTCTATACTGACCGCTTTGGCATCTTCCCTTATGTGGACAAGGAGAGTGGAAAGCATCATGGCAGTGGTCTTCCACAGCTGATTGATTTCACCAGGCACTGGGAGCTGGCTGAGGGGAGCATCATCTTCTATATTCCTGAGGATCAGCCTGGCCTGGCTGTGCTGGATTTTGAGGAGTGGAGACCACAGTGGGTCCGAAACTGGGGCAACAAATATGTTTACAGGGAGCAGTCTATTAAAGCCATCATGCAGAAGAACCTCTCTCTGTCCTATAAAGAAGCACACGCGTTAGCAGTGATTGCGTTTGAGAAGGCAGCAAAGGAGTACTTCCTCCAGTCCTTGAGCCTTGGAAAGAAATTGAGGCCTTCACGTAAATGGGGCTACTACCTGTATCCTGAGTGTTATAACTATCACTACAAAAACAACATGGATCTTTACACAGGAGAGTGTCCAGAAATTGAAAAGCTGAGGAATGACAAGCTGCTCTGGCTTTGGAATGAATCTACCGCCCTctttccatccatctatctggaGCTTGCACTACAGGAGTCCCATCAGGCAAAGCTTTATGCTCGTCACAGGGTTCAGGAAGCCATGAGGGTTTCCAAACTCTCAAACAGGAGCTCTGCTGTTCCTGTTTATCCATACATTCGCCCATGCTTTAAAGACCGTGATGTCAACTACCTGTCTGAGtATGACCTGGTCAACACTGTAGGTGAAGCTGCTGCTTTAGGAGCTGCTGGGGTCATCTCATGGGGTGATATGAAAATCTCAAATTCTGagGTGTCCTGTGCAGCTGCAAAACACCACCTAAAAGAAGTCATGAACCCATACATCTTAAATGTGACCACTGCCACACAGCTGTGCAGTGAAGCCCTGTGTCAGGGTAAGGGCAGGTGTGTGAGGAGGATCTGGGACAGTGGAGAGTATCTTCACTTGTCTCCACAGAGGTATCAAATCTACAAGGACAGCACGAGTGGGCTGTTTGTGAAGGGTCAGATCTCACAGGAGGACGTCGATTGGTTTCAGGAGAGGTTTGACTGTGCGTGCTACACAGGGGAGCCGTGTTATGCACCTCTCGCTCTGAATATTGTTTCCAGGTTTACCTATAATGATGGTTTGTCTTTGTCACACTTCACGATGGTACAATGGCTGGCCTATGCACTGACCATTACATGGATTGTTGTGATTTGTTGATTTGTTGAAGCACTTtcaagataataaaaaaaaactttaca
>XM_022671893.1
agacgGTGTTCAGCATAGAAATACATGGAaacatggaaataaaataaaATCCAGTTTGCTGTTGAGCAACTAGTGCTGGGACTTTAACTTTTTGgtGCTGATGAACCATAACATGATGTTCTTTAGTAACTTGATGTATGCCCATTACTGCTGGACTGTGATCACTGCTTCTCTGATGCCAGGTTtcccttttgtgtttgtgtggaatGCTCCTACAGAACTCTGCAGGAGTCGATTTAGCTTTGAGCTAGATCTGTCTTACTTCCAAATTGTGAGCAGCACATTAAAGACAGCCACTAATCAAAGGGTCTCCATCTTCTATACTGACCGCTTTGGCATCTTCCCTTATGTGGACAAGGAGAGTGGAAAGCATCATGGCAGTGGTCTTCCACAGCTGATTGATTTCACCAGGCACTGGGAGCTGGCTGAGGGGAGCATCATCTTCTATATTCCTGAGGATCAGCCTGGCCTGGCTGTGCTGGATTTTGAGGAGTGGAGACCACAGTGGGTCCGAAACTGGGGCAACAAATATGTTTACAGGGAGCAGTCTATTAAAGCCATCATGCAGAAGAACCTCTCTCTGTCCTATAAAGAAGCACACGCGTTAGCAGTGATTGCGTTTGAGAAGGCAGCAAAGGAGTACTTCCTCCAGTCCTTGAGCCTTGGAAAGAAATTGAGGCCTTCACGTAAATGGGGCTACTACCTGTATCCTGAGTGTTATAACTATCACTACAAAAACAACATGGATCTTTACACAGGAGAGTGTCCAGAAATTGAAAAGCTGAGGAATGACAAGCTGCTCTGGCTTTGGAATGAATCTACCGCCCTctttccatccatctatctggaGCTTGCACTACAGGAGTCCCATCAGGCAAAGCTTTATGCTCGTCACAGGGTTCAGGAAGCCATGAGGGTTTCCAAACTCTCAAACAGGAGCTCTGCTGTTCCTGTTTATCCATACATTCGCCCATGCTTTAAAGACCGTGATGTCAACTACCTGTCTGAGtATGACCTGGTCAACACTGTAGGTGAAGCTGCTGCTTTAGGAGCTGCTGGGGTCATCTCATGGGGTGATATGAAAATCTCAAATTCTGagGTGTCCTGTGCAGCTGCAAAACACCACCTAAAAGAAGTCATGAACCCATACATCTTAAATGTGACCACTGCCACACAGCTGTGCAGTGAAGCCCTGTGTCAGGGTAAGGGCAGGTGTGTGAGGAGGATCTGGGACAGTGGAGAGTATCTTCACTTGTCTCCACAGAGGTATCAAATCTACAAGGACAGCACGAGTGGGCTGTTTGTGAAGGGTCAGATCTCACAGGAGGACGTCGATTGGTTTCAGGAGAGGTTTGACTGTGCGTGCTACACAGGGGAGCCGTGTTATGCACCTCTCGCTCTGAATATTGTTTCCAGGTTTACCTATAATGATGGTTTGTCTTTGTCACACTTCACGATGGTACAATGGCTGGCCTATGCACTGACCATTACATGGATTGTTGTGATTTGTTGATTTGTTGAAGCACTTtcaagataataaaaaaaaactttaca

Function

GO: NA

KEGG:

id description
K01197 hya; hyaluronoglucosaminidase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007246550.2 True 1690 mRNA 0.46 5 18970412 18973144
XM_022671893.1 False 1554 mRNA 0.46 5 18970412 18973313

Neighbor

gene id symbol gene type direction distance location
dld dld coding downstream 345217 18619136 ~ 18625195 (-)
parp16 parp16,LOC107662480,LOC107589319,LOC107595248 coding downstream 502299 18461375 ~ 18468113 (-)
LOC103028541 apba2,LOC108436900,LOC105892347,LOC106584731,LOC106530680,LOC103462423 coding downstream 521857 18430338 ~ 18448555 (-)
duox1 duox1,LOC108436899,LOC107712499,LOC106561775 coding downstream 544318 18406321 ~ 18426094 (-)
LOC103025779 tjp1b,LOC108414298,LOC107589322 coding downstream 594758 18228352 ~ 18375654 (-)
LOC103027908 NA coding upstream 1995 18975308 ~ 18977165 (-)
LOC103028224 NA coding upstream 5535 18978848 ~ 18987058 (-)
LOC103035727 hyal6,LOC108436892,LOC107698319,LOC107752305,LOC105896038,LOC107573512,LOC106561028 coding upstream 50377 19023690 ~ 19046218 (-)
LOC103036047 NA coding upstream 107835 19081148 ~ 19086198 (-)
asb15 asb15 coding upstream 113580 19086893 ~ 19095789 (-)
G74796 NA non-coding downstream 2502 18960804 ~ 18967910 (-)
G74792 gpr37,gpr37a,LOC107753714,LOC107598835,LOC105006086,LOC107752307,LOC107698235 non-coding downstream 20296 18948629 ~ 18950116 (-)
G74740 NA non-coding downstream 320641 18649439 ~ 18649771 (-)
G74735 NA non-coding downstream 330227 18637263 ~ 18640185 (-)
G74716 NA non-coding downstream 341007 18629061 ~ 18629405 (-)
G74804 NA non-coding upstream 10882 18984195 ~ 18986193 (-)
G74910 NA non-coding upstream 306339 19279652 ~ 19341936 (-)
G74915 NA non-coding upstream 314027 19287340 ~ 19290287 (-)
G74928 NA non-coding upstream 352079 19325392 ~ 19418804 (-)
G74909 aass,LOC107753626,LOC107678990,LOC107752301,LOC107698474 non-coding upstream 371632 19344945 ~ 19350011 (-)
G74791 NA other downstream 29948 18939174 ~ 18940464 (-)
G74591 isl2,LOC105022634 other downstream 940665 17982747 ~ 18029747 (-)
nrg4 NA other downstream 1085017 17877026 ~ 17885395 (-)
LOC103041134 rps27l,zgc:136826,LOC107752326,LOC107598918,LOC101156845 other downstream 2500089 16467089 ~ 16470323 (-)
LOC103046265 pkp3 other downstream 3189734 15758303 ~ 15780678 (-)
LOC103034453 LOC108436916,LOC107753633,LOC107659484,LOC107573489,LOC107752304,LOC108181664,LOC107598834 other upstream 19355 18992668 ~ 19008366 (-)
G74838 wasl,LOC105896696,LOC108275301 other upstream 97625 19070938 ~ 19072888 (-)
G75100 LOC108436948,LOC108275266 other upstream 886381 19859694 ~ 19865982 (-)
G75207 api5,LOC107696269,LOC107753602 other upstream 1053849 20027162 ~ 20032027 (-)
hsd17b12 hsd17b12,hsd17b12a,LOC107661451,LOC107696265,LOC107573907,LOC107716735,LOC107753600 other upstream 1111115 20084428 ~ 20100250 (-)

Expression


Co-expression Network