LOC103035727 (hyal6,LOC108436892,LOC107698319,LOC107752305,LOC105896038,LOC107573512,LOC106561028)


Basic Information

Item Value
gene id LOC103035727
gene name hyal6,LOC108436892,LOC107698319,LOC107752305,LOC105896038,LOC107573512,LOC106561028
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 19023690 ~ 19046218 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007246555.3
TTCAGGCTGGATTTTTCTCTGGTGACAGTTATGTTGGGACAGTGCTGCTGACCCTATTTGCAGCTTGATTAGAGTGCGATTGGGAGGAGCGACAATAATCCAACAACAAAAGACTGCAAATGATGCTTCCATGCATGCCTGTACCAAAAGAGGCACAGAAAAGCTATTATAGAATCAGCACAGAACCAGCCATGGAGAAATCAACACCTAAAGCTGATCTTTTTATTTAGGTGGAGTTTTTGACAGTGTGTAATGACAGAACACTACAGGAAAAGGACACAGCAGATGACCAAGTACAACTGACTCTAAAGGTCACTTTGTGGTTTAAAGAAGACTCACAGTATTTGATAGTAGACTGTAGAAGgTGGGTGACTGATCCATGCAGACCCAGGGGTGATGGCAGTGTCTGACCTGCTGACTGTAGTGCTGTGGGGGTTGGTTGTTGTTCAGGGTGAGCAGCTGAAACAGGCCCACACTCCTCTACTGCCCCATCGGCCGTTTGTGGTGGTGTGGAACGCACCCACTGAATCGTGCCGTCTGCGTTTTAAGGTGGACCTGGATTTAAGTGTATTTGACATTTTTGCTAACCAAAATGAAACACTGAGCGGCCCAAATGTCACCATCTTCTACCACAGTCACCTGGGCTACTACCCTTATTACACCAGCACTGGAGTTCCTATCAATGGAGGCCTGCCTCAGAACCAGAGCCTCAGCAAGCACCTCAACAAAGCCAGAGCTGACATCGACAAGCTCATCCCGTTCAAAGACTTCCGAGGACTTGCTGTGATTGACTGGGAGAACTGGCGTCCTCAGTGGGTGCGCAACTGGGGCTCCAAGGACATCTACCGGAACAAATCCAAGGAGCTCATAAGAAAGGCTCATCCTCGCTGGCCTCAAAGCAAAGTGGAGAATGAAGCCAAGGAGACTTTTGAGAGAGCAGGACAGGCTTTCATGAACTTCACTCTACAGCTTGCAAAGAGTCGCCGGCCACATGGCCTGTGGGGCTTTTACCTGTTTCCAGACTGCTACAACTACGGCTACAAGCAGCACCCACACCGATACACGGGAGAGTGCCCCAATGTGGAGCATGTGCGTAACGACCATCTCATGTGGCTTTGGAAGGAAAGCACAGCGCTCTATCCATCCATATACCTGGACTATGAGCTGAAGTCTTCACCCAACACTGTGAAGTTTGTGCACTATAGGGTCAAGGAGGCAATGCGGATCGCCTCGATCGCCCGGAATGACTTCACTCTGCCTGTGTTCGTGTACTCCAGACCCTTTTATGCCTACACATTCACTGTGCTGTCTGAGAGTGACCTGGTCCACACCATAGGAGAGAGTGCAGCACTGGGTGCAGATGGAgtggtcctgtggggttctTCAGAGTATGCTCGATCTCAGAGAAACTGTCTgacagtgaaaaaatatatcGATGGCCCACTTGGCCATTACGTCATCAACGTTACTTCTGCAGCTAAGCTGTGCAGCAAGGCTCTGTGCAAGAAGAATGGTAAATGTGTTCGCAAGAGCATGGACTCTAAAGCTTACCTGCATTTAAACCCCCGTTTCTTTAACATCCACCTCAACCGAGCCGCCCGCGGCCCTCGTTTCCATGTGAGCGGACACCTCAACTACCACGATATACTGGACATGAAGCACAAATTCACCTGCCAGTGTTACCAGGGCTGGACGGGTATCTACTGTGAAATACCTCAGCTCATCCACCCACTGCCTCCCAGATCAAACGACAGTTTCCTGCCTGAGCTGCTGCTCGTGCTGTCCCTTTATTTCTCCTGTCTGTCCGTCATCATTTTTCTTGGACTGTGTCTCATTATTAAGTGTCTCATCTTATAAACAGTGTTGTTGAAAAGGTTGTGGACACATGTTGAGACAAAGTGCTTGGACATCCAGGCTAGAGCACACTGACAGGGCGAACGTTGACAAGCATGAagcatttgaaaaaaatcttaaatgttTTCTGTTCCTTTAATTTAGTTCATTTGACTTGAAAGTTCATTTTCTACCAGTATTGGTGAATCACTGTAGCCTTTATTTAATAGAACTGTAACAGGAAGTCTGTTTATGTAGTTATTCTACATATGgaaacataacaaaaaatagttgtttacttggagcatgGTCACTCCTCATATCTAGAGTTATAGTAAATTGCCTGAAAGAAGACAAACAAAATGCAGCCTGGGGAACTCTGAACAGCCACTGTGAGAATGCACCAAACTGTAATGACAAAGTTGGTTGACCAAGATGGCTCAGACTTGGTTAAGGCTCCAAAACACTGTCTTCCTACAGTTGTGCCTATAAACTTTGAAGGCTAAAACAATATCTCTCCATCTTGAGCTTTTTTCATCTTAATGAATCACTCACATAATGTGACAGTTATCCCAACTCatacatgtacagctctggaaaaaagagaccatctcagtttctgaataagtttctctaattttgctatttaaat
>XM_022672245.1
TGAATAccagaaaaacacaaataagaGCCGCGCTGCCAGGCTGATTAGctatattcattatttactattttcCCATTTCCGCTGGTGATGTGTTTGAGTGAAGACTGATCATTCGTAACTTCTCCTAACGCATGATTTAATCAAACGTGCCTGATGAAAGGATGGCCTTCTTTCATTGGATTGAGTTTGTCGGGAGGTTGTTGATCAGACGGAGATGCAGTACTAAAAAAATGTGGAGTTTTTGACAGTGTGTAATGACAGAACACTACAGGAAAAGGACACAGCAGATGACCAAGTACAACTGACTCTAAAGGTCACTTTGTGGTTTAAAGAAGACTCACAGTATTTGATAGTAGACTGTAGAAGgTGGGTGACTGATCCATGCAGACCCAGGGGTGATGGCAGTGTCTGACCTGCTGACTGTAGTGCTGTGGGGGTTGGTTGTTGTTCAGGGTGAGCAGCTGAAACAGGCCCACACTCCTCTACTGCCCCATCGGCCGTTTGTGGTGGTGTGGAACGCACCCACTGAATCGTGCCGTCTGCGTTTTAAGGTGGACCTGGATTTAAGTGTATTTGACATTTTTGCTAACCAAAATGAAACACTGAGCGGCCCAAATGTCACCATCTTCTACCACAGTCACCTGGGCTACTACCCTTATTACACCAGCACTGGAGTTCCTATCAATGGAGGCCTGCCTCAGAACCAGAGCCTCAGCAAGCACCTCAACAAAGCCAGAGCTGACATCGACAAGCTCATCCCGTTCAAAGACTTCCGAGGACTTGCTGTGATTGACTGGGAGAACTGGCGTCCTCAGTGGGTGCGCAACTGGGGCTCCAAGGACATCTACCGGAACAAATCCAAGGAGCTCATAAGAAAGGCTCATCCTCGCTGGCCTCAAAGCAAAGTGGAGAATGAAGCCAAGGAGACTTTTGAGAGAGCAGGACAGGCTTTCATGAACTTCACTCTACAGCTTGCAAAGAGTCGCCGGCCACATGGCCTGTGGGGCTTTTACCTGTTTCCAGACTGCTACAACTACGGCTACAAGCAGCACCCACACCGATACACGGGAGAGTGCCCCAATGTGGAGCATGTGCGTAACGACCATCTCATGTGGCTTTGGAAGGAAAGCACAGCGCTCTATCCATCCATATACCTGGACTATGAGCTGAAGTCTTCACCCAACACTGTGAAGTTTGTGCACTATAGGGTCAAGGAGGCAATGCGGATCGCCTCGATCGCCCGGAATGACTTCACTCTGCCTGTGTTCGTGTACTCCAGACCCTTTTATGCCTACACATTCACTGTGCTGTCTGAGAGTGACCTGGTCCACACCATAGGAGAGAGTGCAGCACTGGGTGCAGATGGAgtggtcctgtggggttctTCAGAGTATGCTCGATCTCAGAGAAACTGTCTgacagtgaaaaaatatatcGATGGCCCACTTGGCCATTACGTCATCAACGTTACTTCTGCAGCTAAGCTGTGCAGCAAGGCTCTGTGCAAGAAGAATGGTAAATGTGTTCGCAAGAGCATGGACTCTAAAGCTTACCTGCATTTAAACCCCCGTTTCTTTAACATCCACCTCAACCGAGCCGCCCGCGGCCCTCGTTTCCATGTGAGCGGACACCTCAACTACCACGATATACTGGACATGAAGCACAAATTCACCTGCCAGTGTTACCAGGGCTGGACGGGTATCTACTGTGAAATACCTCAGCTCATCCACCCACTGCCTCCCAGATCAAACGACAGTTTCCTGCCTGAGCTGCTGCTCGTGCTGTCCCTTTATTTCTCCTGTCTGTCCGTCATCATTTTTCTTGGACTGTGTCTCATTATTAAGTGTCTCATCTTATAAACAGTGTTGTTGAAAAGGTTGTGGACACATGTTGAGACAAAGTGCTTGGACATCCAGGCTAGAGCACACTGACAGGGCGAACGTTGACAAGCATGAagcatttgaaaaaaatcttaaatgttTTCTGTTCCTTTAATTTAGTTCATTTGACTTGAAAGTTCATTTTCTACCAGTATTGGTGAATCACTGTAGCCTTTATTTAATAGAACTGTAACAGGAAGTCTGTTTATGTAGTTATTCTACATATGgaaacataacaaaaaatagttgtttacttggagcatgGTCACTCCTCATATCTAGAGTTATAGTAAATTGCCTGAAAGAAGACAAACAAAATGCAGCCTGGGGAACTCTGAACAGCCACTGTGAGAATGCACCAAACTGTAATGACAAAGTTGGTTGACCAAGATGGCTCAGACTTGGTTAAGGCTCCAAAACACTGTCTTCCTACAGTTGTGCCTATAAACTTTGAAGGCTAAAACAATATCTCTCCATCTTGAGCTTTTTTCATCTTAATGAATCACTCACATAATGTGACAGTTATCCCAACTCatacatgtacagctctggaaaaaagagaccatctcagtttctgaataagtttctctaattttgctatttaaat

Function

symbol description
hyal6 Predicted to enable hyalurononglucosaminidase activity. Predicted to be involved in hyaluronan catabolic process. Predicted to act upstream of or within carbohydrate metabolic process. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in cytoplasmic vesicle.

NR:

description
PREDICTED: hyaluronidase-like

GO:

id name namespace
GO:0005975 carbohydrate metabolic process biological_process
GO:0004415 hyalurononglucosaminidase activity molecular_function

KEGG:

id description
K01197 hya; hyaluronoglucosaminidase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007246555.3 False 2485 mRNA 0.46 5 19023690 19042135
XM_022672245.1 True 2487 mRNA 0.46 7 19023690 19046218

Neighbor

gene id symbol gene type direction distance location
LOC103028224 NA coding downstream 36632 18978848 ~ 18987058 (-)
LOC103027908 NA coding downstream 46525 18975308 ~ 18977165 (-)
LOC103034129 NA coding downstream 50377 18970412 ~ 18973313 (-)
dld dld coding downstream 398495 18619136 ~ 18625195 (-)
parp16 parp16,LOC107662480,LOC107589319,LOC107595248 coding downstream 555577 18461375 ~ 18468113 (-)
LOC103036047 NA coding upstream 34930 19081148 ~ 19086198 (-)
asb15 asb15 coding upstream 40675 19086893 ~ 19095789 (-)
ptprz1 ptprz1 coding upstream 318380 19364598 ~ 19437614 (-)
LOC103041446 LOC108436924 coding upstream 416139 19462357 ~ 19473042 (-)
fnbp4 fnbp4,LOC107681673,LOC107753624,LOC107678983 coding upstream 429332 19475550 ~ 19485147 (-)
G74804 NA non-coding downstream 37497 18984195 ~ 18986193 (-)
G74796 NA non-coding downstream 55780 18960804 ~ 18967910 (-)
G74792 gpr37,gpr37a,LOC107753714,LOC107598835,LOC105006086,LOC107752307,LOC107698235 non-coding downstream 73574 18948629 ~ 18950116 (-)
G74740 NA non-coding downstream 373919 18649439 ~ 18649771 (-)
G74735 NA non-coding downstream 383505 18637263 ~ 18640185 (-)
G74910 NA non-coding upstream 233434 19279652 ~ 19341936 (-)
G74915 NA non-coding upstream 241122 19287340 ~ 19290287 (-)
G74928 NA non-coding upstream 279174 19325392 ~ 19418804 (-)
G74909 aass,LOC107753626,LOC107678990,LOC107752301,LOC107698474 non-coding upstream 298727 19344945 ~ 19350011 (-)
G74911 aass,LOC102787118 non-coding upstream 307875 19354093 ~ 19355051 (-)
LOC103034453 LOC108436916,LOC107753633,LOC107659484,LOC107573489,LOC107752304,LOC108181664,LOC107598834 other downstream 15324 18992668 ~ 19008366 (-)
G74791 NA other downstream 83226 18939174 ~ 18940464 (-)
G74591 isl2,LOC105022634 other downstream 993943 17982747 ~ 18029747 (-)
nrg4 NA other downstream 1138295 17877026 ~ 17885395 (-)
LOC103041134 rps27l,zgc:136826,LOC107752326,LOC107598918,LOC101156845 other downstream 2553367 16467089 ~ 16470323 (-)
G74838 wasl,LOC105896696,LOC108275301 other upstream 24720 19070938 ~ 19072888 (-)
G75100 LOC108436948,LOC108275266 other upstream 813476 19859694 ~ 19865982 (-)
G75207 api5,LOC107696269,LOC107753602 other upstream 980944 20027162 ~ 20032027 (-)
hsd17b12 hsd17b12,hsd17b12a,LOC107661451,LOC107696265,LOC107573907,LOC107716735,LOC107753600 other upstream 1038210 20084428 ~ 20100250 (-)
LOC103032014 maf,LOC108428434,LOC108274756,LOC102790406,LOC102298902,LOC101477682,LOC102192535,LOC101173775,LOC100702616,LOC107663990,LOC107565340 other upstream 1576423 20622641 ~ 20748208 (-)

Expression


Co-expression Network