LOC103025929 (adra2da,LOC108430987,LOC105904584,LOC107667592,LOC107757419)


Basic Information

Item Value
gene id LOC103025929
gene name adra2da,LOC108430987,LOC105904584,LOC107667592,LOC107757419
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 6864024 ~ 6868262 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007253582.3
tgtgtgtttgtgtgtgtatgtgtgtgtgtggaagtgggCTGTCCTGCGTGACGTCACCACCCCGCTATCTCTCAAGCGCACATTCCAACATTTCATCCGGAGAGCAGCGCGAGTTTGGCGAGGCGCGCGACACTGGAGTGACGGACAGGCTGACAGACAGCGCGCGTGCAAGAGAGGGAAGATAAAAGCGTGCAGGatcaaagaaaggaaaaaagcgACATTCCCGCGCTCGGATGAAGCTCAGTCcctcttttatctcttttatatgttttttccaTCGTGGATTATTTCTTGGACCACCACTATGTCGACCATCATTAATCCTGACTAGAGTGTGAACCGTGTGCTCGCGCCTTGGGTTTGTCCGCGCGCGCCGGAGAGCTCGAGTGGTTCACCATCCAGACTACTCACTTacctatctctctatctatctatttatatcCACTGGAGACGATGCGCGCATCATGGACTTGACGCACTCCAATGCATCCACGCATGACTCCACCACCGCTAGCACTACCAGCAGCCCCGACAGTAGTGGCCATGGGGGGCTCACGGAGGGCTTGTCCTTCTCCAACACAACCGCGCGGCCGTGGCCGCACGCGGACGTGTCCGCAGCCTTCATCATCCTCGTTGTGTCGCTCCTCATCCTCCTGACCATCGTCGGGAACGCGCTGGTGATCGTGGCCGTGCTGACGAGCCGTGCCCTTCGCGCCCCCCAGAACCTCTTTCTCGTGTCCCTGGCGTGCGCGGACGTGCTCGTGGCCGCGCTTGTGATCCCGTTCTCGCTCGCCAACGAGGTGATGGGCTACTGGTACTTCGGCAGCGTGTGGTGCTCGCTCTACCTGGCGCTGGACGTGCTCTTCTGCACCTCGTCCATCGTGCACCTGTGCGCCATCAGCCTTGACCGCTACTGGTCGGTGACGCGCGCCGTGCGCTACAACCTAAAGCGCACGCCGAGGCGCGTGCGCTGCGCCATCGCCGTCGTGTGGCTGGTGTCGGCTGTCATCTCCTTCCCGCCCATCGTGCTCACGCGCCACGGCGAGGGAGAGTGCCTGCTGAACGAGGAGCCGTGGTACATCCTCTCCTCCGCGCTCGTGTCCTTCTTCGCGCCCGGCTTCATCATGGTCACCGTCTACTGCAAGATCTACCGCGTGGCCAAGCAGCGCTCGGCCACCGTGTGCGCGGCGCAGAACGGCACCATAGCGGCGGCCGTGGCTAAAGCGACGGCGGCAGCAGCAATGCGCGCGGACGCCTGCGCCGTGCGCCGCCGCGCCGCCGACACGGAGAGCGCGAGCAGCCACAGCTCGGGGAGCGAGGCGCGTCGCGAGGAGCTGGACGACATAGACCTGGAGGAGAGTTGCGTTGGAGGGAGGGTGCGGGACATCGGAAGCGGGGGTGCGGGAGGAGGAGCGGGTGGAGGTGGAAAAGTAGGAGGACGCGCACCGTGGGCCACCAGCCGCGCGCTCATCCCGCCGAACAGACCCCCTTACCACCACCAGGCACCGCGCACGGGCGCGTACCGGAGCAGAGCCGCGCAAATGCGCGAGAAGCGCTTCACCTTCGTGCTGGCCGTGGTGATGGGGGGCTTCGTGCTCTGCTGGTTCCCCTTCTTTTTCACCTACAGCCTGAGCGCGCTGTGCAGGGAGAGCTGCGCCGCGCCGGAGGGGCTCTTCAAGCTCTTCTTCTGGATCGGATACTGCAACAGCTCGGTCAACCCCATCATCTACACCATCTTCAACAGGGACTTCAGAAAAGCCTTCAAAAAGATACTGGGGCTCAATCAGCCTGCGAGGACTTAATGCTCAACAGGGCTTCTGCTCATCGCCACAAAGGGACATCCATCACTAAAGGAACAGCCATAGATGTGACGGAACTTATATATGGCTAAAGGAATGTGCCTAAAATATGAAGGAACATACCTAGTGCTAAAGGAATATAATTAGCACTGAAAGAAAATCCCTAGAGGTGAGAAAATAAAGCGCACAGAGGGCTGGAGAAACATCCCTAGATCCCTAGAACTGATGCAACTTTAAAGGAACATTCCTAGCATTGAAGGAATATACTCAGTGCCGAAGAAATATAGAGcgaatatactgtatgtagctGAAGGAAGTCACATAGGGAATGTTAAAGTAACACGCTGTAGGAAAAGTTTGTGCTGATCTACActgtgtgtccaacagttttaGAAACTGTTTAATATGAAGCTTCTTCTGAACTCATTGGtattaataatgatatttaTAATTCAGAAGTTGTTTAACTGTAGAAAAACTTGCAGGTTCATAAACTTTACAGAGATGGTGATGGGAATCAAATTAAAGCCATTTTATTACTGACAAAAAAGTGCCAATGCACTGATATGTGTCttctgagattaaaatatattgCTGATGGTGGGAAAATAGTGATTCTCTGACTTGGGACTGgaaacagaaactgaaaaaaaaaaacagttactgtGCTGAAAAACTGTATCATACCTAGGGCTGAAGGAACATAATTAGCAGTGAAGGAAGGTCCCTAGAGGTGGAAAAAATGCTATTGCTGAAGGAAATCCCATAGGGAGTTTTAAAGTAACATACTTAGAGCTGAAAGAAAAGTTATGCTCTGAATGTATTCAAAAACGTGCTGATCTACACTTTGTGTCCAACAATTTTAGGCTCTGTTTAATCTGAAGCTTCTTTTGAACTCATTCCTATAAAAGAGAATTCTTTCTAATTTCTTCATAATTCAGAAGTGGTTAACCATTGAAAAACTGGCAGGTTCTCACACTTTACAGAGATGGTGATATGATGAAAACCAAATTAAAGCCATCTTAGTTACTATCAAAAAAGTGCCAATTAACTGATATGTGTCTTCTGAGATTAAAATGTAATGCTGGTGGTGGGAAAATGGTGATTCTCTGATTGGGACTGGGGACAGAAGGCTGAAAAAAATAGTTACTGTGCTGAAAATGTACATCATACCTAGGGCTGAAGAATCATAGAGGGCTGGAAAAACAGTATAAGCAGTGCTGAAGAAATTTAACCTATATCTTAAGGAATATAGTTCCCTAGAACTGAtgcaacttttaaaacttttgtagAGCTGCATGTTACACCAATGCTAGAGAAATATTGAAGGAATGTGCTCTGAATGTGTTCAAAAATGTGCTGATCTACACTGTGTGTCCAACAGATTTAGGCTCTGTTTAATCTGAAGCTTCTTCTGAACTCATTGCTCTTAAAGAGAATTGTTCCTAATTTCTTTAAGATTTAGAAGTTGGTTAACTGCAAGTTCATGTACGTGACAGAGATGGAGGTTTAAACCATATTAAAGCCATTTTAGTTAGTATCAAAAAAGGTGCCCATTATTTGATATGTGTCTTCTGAGTTTTATGTATGATGCTGATAATTCGAAAAAATAGTGATACtgtgataaataaaaaacatatatagtgCTGAAAATCTATATATAGCATGGAAGGAACATATTTAATGATAAAGCAATATACCTAGTGCTGAGGAAACATGACTAGTGCTGAAGGAACATGGTTAGGGttgggaaaacaaacaaaggaacAAATGAAACTTGAAGAACTTGAAGTGAAGAAACATAAGTAGCACTGAAGTAATGTAGTATTTAGAGCTGAAAGATCATAGAGTGTCATGAAGAAACATACACATGACTAAGAAACATTTCTAGTGCTGAAGGAACAGGTAGCTAGAACCTGAGGGAACTGACCTAGTTCCGGTAATGTCCCACTGTAAAACCCAGTAAAtgaatttaacttaaaaaatgggaaactacaacaaaaatgacaaacaacaacaaatattcTGTATATTAAGTAGGTTTTAGTATGTAATTTAACGATACagtaacatattttaaagaAGCTACTTTTGTATTCTATAGgtgaacaaaatatatttaaatttagtaattttcatcaataataaaaagaaaaatatatatctaaaataGTCATGGAAAAATAGATGGAGAAACAAAATGCTATAGATTGAACACTACagaacaggggtcggcaataggtgacccacgggccagatgtggcctgcaagcatgaaacatctggcccgtgaggttgtttgaactataatgatcaataatgaaaaaaatgaaattctcTTGCAAACTTTTGTTTAATGTTGgtattcctcccctgtctctctgtcgcgctcggcatgactttagtttctgcccgttctcatttttccacccgttcttggg

Function

symbol description
adra2da Enables alpha2-adrenergic receptor activity. Involved in adenylate cyclase-inhibiting adrenergic receptor signaling pathway. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Is expressed in brain; cerebellum; musculature system; optic tectum; and ovary.

NR:

description
PREDICTED: alpha-2Da adrenergic receptor-like

GO:

id name namespace
GO:0007194 negative regulation of adenylate cyclase activity biological_process
GO:0071875 adrenergic receptor signaling pathway biological_process
GO:0005887 integral component of plasma membrane cellular_component
GO:0004938 alpha2-adrenergic receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007253582.3 True 4239 mRNA 0.47 1 6864024 6868262

Neighbor

gene id symbol gene type direction distance location
LOC103026932 NA coding downstream 270900 6585674 ~ 6593124 (-)
LOC103027842 LOC108430992,LOC104947123,LOC107094991,LOC106517448,LOC103354384,LOC106905160,LOC108240514 coding downstream 280282 6570816 ~ 6583742 (-)
LOC103036141 LOC108430946 coding downstream 325242 6522057 ~ 6538782 (-)
hars hars,LOC106611772,LOC107660169 coding downstream 548183 6293684 ~ 6315841 (-)
LOC103043333 LOC108442486,LOC108275354 coding downstream 642171 6161655 ~ 6221853 (-)
LOC103025318 LOC108430942 coding upstream 81314 6949576 ~ 6956193 (-)
LOC103024994 stc2a,stc2,LOC108430941,LOC108274458,LOC107677705 coding upstream 116956 6985218 ~ 7006934 (-)
LOC103022894 drd1a,LOC108430983,LOC108274482,LOC107553333,LOC107677717,LOC107598377 coding upstream 392719 7260981 ~ 7265921 (-)
kif3a kif3a coding upstream 556421 7424683 ~ 7444873 (-)
LOC103030823 LOC108430979 coding upstream 578316 7446578 ~ 7486638 (-)
G71766 NA non-coding downstream 732 6755432 ~ 6863292 (-)
G71755 NA non-coding downstream 131435 6714141 ~ 6732589 (-)
G71712 NA non-coding downstream 230375 6627067 ~ 6633649 (-)
G71708 NA non-coding downstream 251079 6605271 ~ 6612945 (-)
G71704 NA non-coding downstream 297909 6561124 ~ 6566115 (-)
G71790 LOC105418110,LOC105418502,LOC106676625,LOC102305489,LOC102200059 non-coding upstream 13270 6881532 ~ 6885591 (-)
G71793 NA non-coding upstream 43152 6911414 ~ 6911709 (-)
G71817 NA non-coding upstream 67536 6935798 ~ 6936080 (-)
G71822 NA non-coding upstream 114541 6982803 ~ 6983003 (-)
G71825 NA non-coding upstream 184636 7052898 ~ 7053319 (-)
G71771 NA other downstream 39268 6777239 ~ 6824756 (-)
LOC103035656 LOC103035656,LOC108414340,LOC108274783 other downstream 1022317 5829621 ~ 5841707 (-)
G71458 atp7a,LOC107554685,LOC107684827,LOC107745084,LOC107559604 other downstream 1387649 5471666 ~ 5476375 (-)
trnaw-cca_42 NA other downstream 1939953 4924000 ~ 4924071 (-)
G71235 NA other downstream 1979536 4882170 ~ 4884488 (-)
G71826 NA other upstream 188848 7057110 ~ 7057643 (-)
G71862 NA other upstream 441513 7309775 ~ 7312926 (-)
LOC103027657 LOC108430978 other upstream 682923 7551185 ~ 7590554 (-)
LOC103030515 wu:fb13g09,LOC108441781,LOC108274673,LOC107554714,LOC107716370,LOC107677527 other upstream 905633 7773895 ~ 7842280 (-)
G72336 NA other upstream 1771276 8639538 ~ 8645601 (-)

Expression


Co-expression Network