LOC103037091


Basic Information

Item Value
gene id LOC103037091
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 5696919 ~ 5731315 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007253622.3
acacactcacacacacttcactcacTCTAGTGCACTCAGACCCAGCTCTGCTCTAGCTGACTCAACtcagttcctctctctctctctctctctcatcaggCTCAGGATAACTCCTGAACTGTGTGGTAGAGGAATGAGCAGAGCCCAAACTAATCAAACAGCGCCAACCGCAGGGGAACAGTGGTAACTTCATCTCAGAGAGAGGACACATTTAGAGAAGCACTTCTGTGGGAAGTGTTCTGTTTACCTGCaaacacacctatacacacactcacacacactttcacccAGCAGTTCAGACCagtccccccacacacacacacactccaccatgCTGCAGCAGATCCTAGCAGATATGTACATCGAGCCGGAGATCCTGGAGGCTCTGAACGAAGAGCAGAAGAAGACTCTGTTTCTGAAGATGAGGGAAGAGCAGGTGCGGCGGTGgaaggaaagagaggagaagGAGGGCAAAGAGGGGAGGAAGGAGAAGCCCAAGCCAAAGAAAGGCCCTTGTAAGACTGTGAGCTGGCTCCTGGGTCAAGATGGAGAAGTGCACGTCTGCATTATTGGAGAGCCGGACGAGCTGAAGTCACCTAAACTCCTCTTGTCTGAACTCAGGGACCGAAATGGAACCAGCAAAATCAACAGACCTCAGGCTACAGAGCCACTCAAAAGCAGCCTGGCCAGCATACCGGTCCAGCAAGCCAGCACTGCACCAGGCATAGAACTGCTGCTGAAAAAAGCAGAGGAGATGGAGCACTCAGACTCTGTACCAGACAGCCTGAAACAGGACAGCGATTCTGACTCGCAGGACGACCTGAAGGACCAAAAGGACGACTCGGACTCCTCAGAGTCCTCAAACACCTCAAACACCTCCCCGAGCGACCACAACAGTGACCTGGCCCTTCCCAAACCCCACCGGACAGACAGAGGCACGTCTGTAACAGAGAGACTCAACCAGCTGAACCTACAGAGAAATGCCCAGGTGCAGCTGCCTGTCACCAACAAGCCCCGCCCACAGGACACGCCCACACAGGACAAAGgATTGGCAAATGAGCAGGTGATCAGCTCGTCTTATGGAAGCCGCGTGGCTCAGCTGAGGAGGAACTTCAACGCACCCAACGCCAAAACCACTTCGCCATGCGCCAAACCGCCCATCCCCATCAAACCCGCTCATCTGCTGGCCTCCACTTCGGCCAGATGAGCACATCCACCCAGCAAATCGGCTCATCTGCTGGCCTCCGTCGCCATCAGATAAGCCCTGCACACACAGAGAGCGGTCTAAGCTGTGGACTGTCGTTAACTTGATGTTACAAAACCTGTAAATAAACCTCCATGAACAAAAAGCAGAGCGACGGACTCGTGCACCATTCGCTACCAGCTACCTTCTTTCTCCCTGGGCTGATGTACAGATACGCAGCAGCACAGGGGGCCTGTACATATGGTGGGAGAGaacgagggcgagagagagaggggtagtgTATATGAAGCCAAAATCCTCTCAATCTCTTCACTGCACTGCAGCACATCATCTCCGAAgggtcaacacacacacacacacacacagccttggCTTTCATGTCTTGGCCTGCCTTCCTGTATCTAGTTTTCACAAGGTATGGCGTCCACTGTCCAGTGGGCTGAGTTTTGTGCTAATTCTTTTATGTATTCGTGTCCGAGTTTTTTTGACACGGTCAGTTCTCCTGAAGGGAAGAAAGACCAAAGGTGTTTTCTACTCTTTGTATAATCTAATGTGCTTTTTGTAAATGATGTCgcactgtaataaaaacatgaaaataaaactTTGTAATATTTCA

Function

GO:

id name namespace
GO:0003774 motor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007253622.3 True 1820 mRNA 0.51 6 5696919 5731315

Neighbor

gene id symbol gene type direction distance location
LOC103044251 NA coding upstream 202355 5491422 ~ 5494564 (+)
LOC103038898 NA coding upstream 211755 5480388 ~ 5485164 (+)
atp7a atp7a,LOC101485317 coding upstream 220488 5430689 ~ 5476431 (+)
atp10b NA coding upstream 288904 5339650 ~ 5408015 (+)
gabrb2 gabrb2,LOC107554707,LOC107684828 coding upstream 383261 5182503 ~ 5313658 (+)
tmem173 NA coding downstream 230965 5962280 ~ 5987766 (+)
LOC103031741 NA coding downstream 277246 6008561 ~ 6011401 (+)
trnaa-agc_14 NA coding downstream 305487 6036802 ~ 6036874 (+)
trnaa-agc_15 NA coding downstream 306361 6037676 ~ 6037748 (+)
LOC103031423 NA coding downstream 540901 6272216 ~ 6291384 (+)
G71490 NA non-coding upstream 88973 5607718 ~ 5607946 (+)
G71489 NA non-coding upstream 93598 5603120 ~ 5603321 (+)
G71473 NA non-coding upstream 163950 5527996 ~ 5532969 (+)
G71474 NA non-coding upstream 164624 5528455 ~ 5532295 (+)
G71411 NA non-coding upstream 286606 5409031 ~ 5410313 (+)
G71518 ube2d2,UBE2D2,ube2d1,ube2d2l,LOC106611705,LOC105010898,LOC100695155 non-coding downstream 69088 5800403 ~ 5859364 (+)
G71527 NA non-coding downstream 93119 5824434 ~ 5828822 (+)
G71528 LOC103035656,LOC108414340,LOC108274783 non-coding downstream 97573 5828888 ~ 5841703 (+)
G71567 NA non-coding downstream 235239 5966554 ~ 6018103 (+)
G71566 NA non-coding downstream 280907 6012222 ~ 6014382 (+)
LOC103037414 NA other upstream 18045 5672718 ~ 5678874 (+)
G71414 gstp1 other upstream 191281 5499908 ~ 5505638 (+)
G71247 NA other upstream 716908 4956298 ~ 4980011 (+)
G71249 NA other upstream 729012 4963702 ~ 4967907 (+)
atpif1 atpif1,LOC105912502,LOC107571275,LOC104922170,LOC107730904,LOC103378180 other upstream 775099 4915813 ~ 4921820 (+)
LOC103043949 ppp3cb,LOC108274683,LOC107660165,LOC107758531,LOC107680292,LOC107589094 other downstream 139775 5871090 ~ 5957019 (+)
G71682 LOC108430946,LOC108416517 other downstream 794326 6525641 ~ 6538794 (+)
G71788 LOC105418110,LOC105418502,LOC106676625,LOC102305489,LOC102201812 other downstream 1150272 6881587 ~ 6885541 (+)
LOC103030246 pcdh2ab8,pcdh2ab10,pcdh2ab12,LOC108430950,LOC101884096,LOC108274577,LOC107588388,LOC108430926,LOC108430925,LOC108430922,LOC108275110,LOC108430948,LOC108275111,LOC107588302,LOC107660888,LOC107754492,LOC107655665 other downstream 3137813 8869128 ~ 9036026 (+)
G72281 LOC107754548,LOC108274935,LOC107754545,LOC107754498 other downstream 3411584 9142899 ~ 9149419 (+)

Expression


Co-expression Network