ndufb9 (ndufb9)


Basic Information

Item Value
gene id ndufb9
gene name ndufb9
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 3347768 ~ 3353595 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007257729.2
ACGGCGGACCTTGATGACACTTCAGTCTCCCACAATCCCTCAGCGGCGCAGTGGAGATCATGGCTGCGTATTTAACCCACCAGCAGAAAGTTCTGCGGCTCTATAAGAAGTCCCTTCGGCACCTGGAGTCCTGGTGCATCTTCAGggATAAGTATCGTTTCTATGCCTGCCTCCTGAGAGGACGGTTCGATGAGAATAAGGGTGAGAAAGACATGGTGAAAGCCACCAAGATGCTGAAAGCTGGAGAAGAGGAGTTCTGGGCTAACCAGCATCCTCAGCCCTACCTGTTCCCCGACTCACCTGGTGGAACCTCTTACGAGAGATACGAATGCTACAAGGTTCCTGAATGGTGTCTGGACCACTGGCACCCCTCTGAGAAGGCCCAGTACCCTGACTACTTCGCAAAGAGAGAGCAGTGGAAGAAGCTGAGAGCCCAGAGCTGGGAGAGAGAGGTCCAGCAGTTGCAGGAGGAGACTCCAGCTGATGGTCCCAAATCCGAGGCTCTTCCTCCAGCCCGCAGGGAGGGCGACCTCCCCCCTCTGTGGTGGCAGTACGTGACCCGTCCCAGAGAGCGCCCCATGTAAACGGCATCCACGCATCGcaaaccacacacagacacacacacactgcatcactCAGTCCTCTCACCCGTGTCCTCAGAGTGCACTCCTGGATCAGTGTGATGAATCGACTCGACCCTGATCTGTTAGTGTGTTAAATTAACAGAGTGCTGAGTGAaacagtctgtgtgtgtagtTTAGGTAGCTggagagtcagtgtgtgtggctgaactgtacagagagataaagtgCACAGTGTGCAAATCACTAATAAACCTGTTCCATACAAGTGA

Function

symbol description
ndufb9 Predicted to act upstream of or within mitochondrial electron transport, NADH to ubiquinone. Predicted to be located in mitochondrial inner membrane and respirasome. Predicted to be part of mitochondrial respiratory chain complex I. Human ortholog(s) of this gene implicated in nuclear type mitochondrial complex I deficiency 24. Orthologous to human NDUFB9 (NADH:ubiquinone oxidoreductase subunit B9).

NR:

description
PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9

GO: NA

KEGG:

id description
K03965 NDUFB9; NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 9

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007257729.2 True 853 mRNA 0.53 4 3347768 3353595

Neighbor

gene id symbol gene type direction distance location
LOC103046819 LOC108439802,LOC107669127,LOC107714775 coding upstream 234134 3095884 ~ 3113634 (+)
LOC103047122 LOC108439803 coding upstream 265829 3058524 ~ 3081939 (+)
LOC103025421 n4bp3 coding upstream 401039 2871576 ~ 2946729 (+)
LOC103021672 LOC108439811,LOC107749774,LOC107653301,LOC107594902 coding upstream 481552 2857895 ~ 2866216 (+)
LOC103025734 LOC108439812,LOC108275395,LOC105903016,LOC107749739,LOC107653313,LOC107594883 coding upstream 493664 2828409 ~ 2854104 (+)
LOC103043978 NA coding downstream 66645 3420240 ~ 3439155 (+)
LOC103032643 deptor,LOC108442483,LOC108274614,LOC107685573 coding downstream 570377 3923972 ~ 3935104 (+)
LOC103042852 LOC108274605,LOC108435589,LOC105028044 coding downstream 601413 3955008 ~ 4105963 (+)
LOC103045063 LOC108435620 coding downstream 778427 4132022 ~ 4215716 (+)
dpy19l4 dpy19l4 coding downstream 953070 4306665 ~ 4339082 (+)
G70820 NA non-coding upstream 24800 3293459 ~ 3322968 (+)
G70821 NA non-coding upstream 41747 3305533 ~ 3306021 (+)
G70819 NA non-coding upstream 71246 3274595 ~ 3276522 (+)
G70779 NA non-coding upstream 290804 3046392 ~ 3056964 (+)
G70742 rmnd5b,LOC106612137,LOC105026275,LOC107653309 non-coding upstream 385658 2958702 ~ 2962110 (+)
G70848 NA non-coding downstream 45748 3399343 ~ 3458582 (+)
G70859 NA non-coding downstream 106360 3459955 ~ 3460502 (+)
G70860 NA non-coding downstream 107103 3460698 ~ 3478336 (+)
G70880 NA non-coding downstream 201921 3555516 ~ 3556070 (+)
G70883 NA non-coding downstream 244489 3598084 ~ 3599084 (+)
LOC103024487 syngap1a,LOC108275193,LOC108439800 other upstream 55293 3121918 ~ 3292475 (+)
G70604 LOC108436838 other upstream 988539 2358883 ~ 2359229 (+)
lrrtm2 lrrtm2,LOC107680618,LOC107750357,LOC103471148 other upstream 1154209 2088920 ~ 2193559 (+)
G70522 NA other upstream 2078364 1268767 ~ 1269404 (+)
G70385 NA other upstream 2341930 1005483 ~ 1005838 (+)
G70846 NA other downstream 24089 3377684 ~ 3378610 (+)
LOC111193071 NA other downstream 56075 3409670 ~ 3574758 (+)
LOC103028288 LOC108435610,LOC108275213,LOC106520856 other downstream 1003470 4357065 ~ 4441931 (+)
atpif1 atpif1,LOC105912502,LOC107571275,LOC104922170,LOC107730904,LOC103378180 other downstream 1562218 4915813 ~ 4921820 (+)
G71247 NA other downstream 1602703 4956298 ~ 4980011 (+)

Expression


Co-expression Network