tmem65 (tmem65,LOC103374125,LOC100698042,LOC102786671,LOC101476933,LOC104966521)


Basic Information

Item Value
gene id tmem65
gene name tmem65,LOC103374125,LOC100698042,LOC102786671,LOC101476933,LOC104966521
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 3298210 ~ 3317552 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007257732.3
CGTCAGGAGTCACACAGAAAGTCTCAGAGCTGAAAAATGAAGTGTTTTCTTTGGGATTTTCGTTGTTTTTCTGCATCTAGACATCGAATATCAGACGGAATGTGATTTAAAATTTGTGTAGCACTTCTCTACACAGGTTCCCGCGTGTTAAAAAGACGATAATACTGATATTAAGAGCAGCGGAGCGTGGTTTCCACTTGAGTCACCCTGTTGTCTGGGCagggtttagggtttagggAGTGAACTGGGCTGGCTGAGCTCAAACTGAGCTCCTCACACAGCAGAAAAACTGCCTTCAGACTTCATTACAACACCCGTCCGGCTCAGTTTTTGCTTTAACTCTCACAGAAATGCGGTTTACAGCCTCcaaaagctgagagaagagcgCTGCTGTGGGctttgtgtgtctttgtgagggagagagaagataAATGAAGGACTGACAGAGTCTGTAACCCTGGCTTAGATTCTGCCCAAGACTgactcctcctttcctccacAATGCTGAGGCTGTGTTTGTCCAGAGCTCTGCAGCCATGTGCTCTGGGTCTGAGAGGAGCACAGGGACGGTCCAGCCCCGGCCCCCCGGCACTACTGTTCCATATGCAGAGGTGCTCCTTGGGAACTCACAAGCATAAGGACAAACTAGAGCTGCTAAACTCCCCGAAGGGAGCCAAGGACTTTATCTACAGTCTGCACCCCACGGAGCGGAGCTGCCTACTCAAAGAGCTGCAGAGCTTCGAGTCCATGGCTATTGCTCAagAGAAACTGGAGTCTTTGCCTCCGAACGCCAGCCAGCTGAGATATGTGCTCCTTCATAACGCCATCCCGTTCGTTGGCTTCGGCTTTCTGGACAACGCCATCATGATCGCTGCAGGAACACAGATCGAGCTGTCTATCGGAGTGACGTTGGGAATTTCAACAATGGCAGCGGCTGCTTTGGGGAACCTGGTGTCTGACCTGGCTGGACTGGGaTTAGCAGGTTATGTGGAGGCTCTAGCTGCCAGATTTGGAATGCAGATACCTGACCTCACACCTAAACAGGTCGACATGTGGCAGACCAGAGTCAGCTCACACAtgGGGAAAGCCATCGGAGTCACCATCGGCTGCATTCTGGGGatgtttcctctcttttttctcagtgatgaagatgaagaggagaagaagaagaaaaaggctGCTGCTCATACTGCACCCTCAGACTCCAAGTAATTTACCTGGGTGCTTTGGACTCAGTCCAATTAACACTATACCAATGGCTCACTCCAAATTCCATTAGCTTCTAAAtggagttttattttattacgtTTTACCTGGATTTAATGGAATTCAAGGCTCAGCTGCAAAATATGGGAGTTTGCTGGTTTTGAGAGACatacttaagtttttatttgtttttaagtttgTAAGGTATGGATTTGCACCACAGAGGAGATGTAAGTAAGTGTTAAGGGATGGAGGGAAGGGCAGGAAGGTACTACAGCTaacgtatttttcgcactataaggcgcatcagattataaagcgcattatgcgacactagtaaggaactggGGTCTCgatgtgttttccttctaatttagcaggtgcGAAAAAACTAGTGCTTTGCGTGGTAAgtggctaatgcttatgctgctccagcagtgctagctggggttagcagcaggctacagtccgatatatttACCTcggaatggcaaaagagctagcgcttagcat
>XM_022671966.1
CGTCAGGAGTCACACAGAAAGTCTCAGAGCTGAAAAATGAAGTGTTTTCTTTGGGATTTTCGTTGTTTTTCTGCATCTAGACATCGAATATCAGACGGAATGTGATTTAAAATTTGTGTAGCACTTCTCTACACAGGTTCCCGCGTGTTAAAAAGACGATAATACTGATATTAAGAGCAGCGGAGCGTGGTTTCCACTTGAGTCACCCTGTTGTCTGGGCagggtttagggtttagggAGTGAACTGGGCTGGCTGAGCTCAAACTGAGCTCCTCACACAGCAGAAAAACTGCCTTCAGACTTCATTACAACACCCGTCCGGCTCAGTTTTTGCTTTAACTCTCACAGAAATGCGGTTTACAGCCTCcaaaagctgagagaagagcgCTGCTGTGGGctttgtgtgtctttgtgagggagagagaagataAATGAAGGACTGACAGAGTCTGTAACCCTGGCTTAGATTCTGCCCAAGACTgactcctcctttcctccacAATGCTGAGGCTGTGTTTGTCCAGAGCTCTGCAGCCATGTGCTCTGGGTCTGAGAGGAGCACAGGGACGGTCCAGCCCCGGCCCCCCGGCACTACTGTTCCATATGCAGAGGTGCTCCTTGGGAACTCACAAGCATAAGGACAAACTAGAGCTGCTAAACTCCCCGAAGGGAGCCAAGGACTTTATCTACAGTCTGCACCCCACGGAGCGGAGCTGCCTACTCAAAGAGCTGCAGAGCTTCGAGTCCATGGCTATTGCTCAagAGAGCGCCCCCTTTAGGCGAGGGCTCAGCAAGGACAAGGCTCAGGCCGAGGTCACTGAGGAGAAACTGGAGTCTTTGCCTCCGAACGCCAGCCAGCTGAGATATGTGCTCCTTCATAACGCCATCCCGTTCGTTGGCTTCGGCTTTCTGGACAACGCCATCATGATCGCTGCAGGAACACAGATCGAGCTGTCTATCGGAGTGACGTTGGGAATTTCAACAATGGCAGCGGCTGCTTTGGGGAACCTGGTGTCTGACCTGGCTGGACTGGGaTTAGCAGGTTATGTGGAGGCTCTAGCTGCCAGATTTGGAATGCAGATACCTGACCTCACACCTAAACAGGTCGACATGTGGCAGACCAGAGTCAGCTCACACAtgGGGAAAGCCATCGGAGTCACCATCGGCTGCATTCTGGGGatgtttcctctcttttttctcagtgatgaagatgaagaggagaagaagaagaaaaaggctGCTGCTCATACTGCACCCTCAGACTCCAAGTAATTTACCTGGGTGCTTTGGACTCAGTCCAATTAACACTATACCAATGGCTCACTCCAAATTCCATTAGCTTCTAAAtggagttttattttattacgtTTTACCTGGATTTAATGGAATTCAAGGCTCAGCTGCAAAATATGGGAGTTTGCTGGTTTTGAGAGACatacttaagtttttatttgtttttaagtttgTAAGGTATGGATTTGCACCACAGAGGAGATGTAAGTAAGTGTTAAGGGATGGAGGGAAGGGCAGGAAGGTACTACAGCTaacgtatttttcgcactataaggcgcatcagattataaagcgcattatgcgacactagtaaggaactggGGTCTCgatgtgttttccttctaatttagcaggtgcGAAAAAACTAGTGCTTTGCGTGGTAAgtggctaatgcttatgctgctccagcagtgctagctggggttagcagcaggctacagtccgatatatttACCTcggaatggcaaaagagctagcgcttagcat

Function

symbol description
tmem65 Involved in regulation of cardiac conduction. Acts upstream of or within cardiac ventricle development. Predicted to be located in mitochondrial inner membrane. Predicted to be active in mitochondrion. Is expressed in female organism and heart. Orthologous to human TMEM65 (transmembrane protein 65).

NR:

description
transmembrane protein 65-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007257732.3 False 1719 mRNA 0.48 8 3298210 3317552
XM_022671966.1 True 1779 mRNA 0.48 9 3298210 3317552

Neighbor

gene id symbol gene type direction distance location
LOC103047641 c14h5orf24,LOC108439806,LOC107594921,LOC107668575,LOC107749736 coding downstream 270517 3023419 ~ 3027693 (-)
LOC103025117 NA coding downstream 278457 2982047 ~ 3019753 (-)
rmnd5b rmnd5b,LOC105026275,LOC100306854,LOC106612137 coding downstream 315564 2958649 ~ 2982646 (-)
anxa6 anxa6,LOC107750364,LOC107594885 coding downstream 481675 2764145 ~ 2816535 (-)
dctn4 dctn4,LOC107749746 coding downstream 619305 2661511 ~ 2678905 (-)
rnf139 rnf139,LOC106569923 coding upstream 6346 3323898 ~ 3335786 (-)
tatdn1 tatdn1 coding upstream 18657 3336209 ~ 3346476 (-)
mtss1 mtss1,LOC106569924 coding upstream 45019 3362571 ~ 3407431 (-)
LOC103024174 LOC108442487 coding upstream 143685 3461237 ~ 3508996 (-)
LOC103042532 LOC108442489 coding upstream 544566 3862118 ~ 3910529 (-)
G70923 NA non-coding downstream 6249 3277476 ~ 3291961 (-)
G70812 NA non-coding downstream 181121 3116884 ~ 3117089 (-)
G70809 NA non-coding downstream 182215 3110805 ~ 3115995 (-)
G70795 NA non-coding downstream 215005 3082976 ~ 3083205 (-)
G70769 NA non-coding downstream 342036 2954612 ~ 2956174 (-)
G70938 NA non-coding upstream 97036 3414588 ~ 3415039 (-)
G70946 NA non-coding upstream 133353 3450905 ~ 3451612 (-)
G70947 NA non-coding upstream 137325 3454877 ~ 3455224 (-)
G70951 NA non-coding upstream 142329 3459881 ~ 3522387 (-)
G70955 NA non-coding upstream 197486 3515038 ~ 3584641 (-)
tnip1 tnip1,LOC107594924,LOC107750363 other downstream 553138 2704195 ~ 2745072 (-)
LOC103042850 cratb,LOC108435838,LOC108274804,LOC107561339,LOC107758403,LOC105903715,LOC107563340,LOC107679039 other downstream 2263194 1009886 ~ 1035016 (-)
LOC111193045 LOC108442482,LOC102793828 other upstream 126543 3444095 ~ 3458810 (-)
LOC103023864 NA other upstream 258009 3575561 ~ 3703751 (-)
LOC103042226 LOC108274609,LOC107701883,LOC100536156,LOC107747745,LOC107574915,LOC108442488 other upstream 419074 3736626 ~ 3848624 (-)
G71175 NA other upstream 1094396 4411948 ~ 4413011 (-)
G71235 NA other upstream 1564618 4882170 ~ 4884488 (-)

Expression


Co-expression Network