LOC103025952 (hspa4,LOC108430974,LOC108274676,LOC100380717)


Basic Information

Item Value
gene id LOC103025952
gene name hspa4,LOC108430974,LOC108274676,LOC100380717
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 7699890 ~ 7719056 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007258574.3
TAAGACTCATCGCAGTGCATCTCTTAGCGCGTGGTGTTGGTTGGACCTGCTGTCTCTCGGTCGGTCCCTCCCTTTAACCGGTTTTCCAGCAGCCGACCGgcttcagtcagtcagtgagagACAGCGCGCGGTGTGTCCGGGCCGGGAGGATGAACTGAGCGCTCACACTGCGCCTCTCTCCGGGTTATATCAGATCAGGGCCGCGGGCTCCGGGTTCAGGCTGTGAACATGTCGGTGGTCGGGTTCGACGTGGGTTTTATGAACTGCTACATCGCAGTGGCGCGAGCCGGCGGCATTGAGACGGTGGCGAACGAGTACAGCGACCGGTGCACGCCAGCATGTGTGTCTTTCGGACCACGAAACCGCTCAATTGGTGCAGCCGCAAAAAGCCAGGTGGTCACTAATTGCAAGAACACCGTCCAGGGATTCAAGCATTTCCATGGGCGAGCTTTCACAGACCCGTTTGTTCAGAGCGTGAAATCCAGCCTTGTTTATGAGCTTTCACAGATGCCCACCGGAACAACAGGAATTAAGGTTATGTACATGGAGGAGGAGAAGGTGTTTAGCATTGAGCAGATCACAGCAATGCTTCTCACCAAGCTGAAGGAGACTGCAGAAAGTGCTCTGAAGAAGCCTGTGGCTGACTGTGTTATATCTGTTCCTTCCTTCTACACTGATGCTGAGAGGAGGTCAGTAGTGGATGCAGCTCAGATCGCTGGACTCAACTGTCTGCGACTCATGAATGAAACTACTGCAGTGGCTCTGGCTTATGGGATTTATAAACAGGACCTCCCAGCCCCCGAAGAGAAGCCCAAAGTAGTGGCGTTTGTGGATCTTGGCCACTCAGGCTACCAGGTCTCTGTGTGTGCCTTCAACAAAGGCAAGCTCAAGGTTCTTGCTACAGCCTTTGACTCTCATTTGGGAGGCAAAGACTTTGATGAGGTCCTCGTAAACCATTTCTGTGAGGAATTTGGGAAGAAGTATAAGCTGGATGTGAAGTCCAAGCCAAGGGCTCTGGTTCGTCTTTACCAGGAGTGCGAGAAACTCAAAAAACTCATGAGTGCAAATTCCTCCGATCTGCCACTTAATATTGAGTGCTTCATGAATGACATTGATGTTACTGGAAAACTGAACAGAGGTCAGTTTGAAGAGATGTGTGCTGACATTCTGGCTCGAGTAGAGGCTCCTCTTCGCAGTATAATGGAACAAGCAAATTTGAAGAATGAGGATATCTgcgctgtggaaattgtgggcGGTGCTTCCAGAATACCAGCAGTTAAGGAGCGAATCAGCAAATTCTTTGGGAAGGAACTGAGCATGACCCTGAATGCAGATGAGGCTGTGGCCAGAGGATGTGCCCTTCAGTGTGCTATCTTGTCTCCTGCCTTCAAAGTCCGAGAGTTTTCCATAACTGATGTTGTTCCCTACCCAATCTCTCTGAAATGGAACTCTGCAGCAGAGGATGGCATAAGTGACTGTGAGGTGTTCCCAAAGAACCACGCAGCTCCGTTTTCCAAAGTGCTAACATTCTACCGGAGAGAACCGTTCTCCTTGGAGGCGTACTACAACAGTCCTACAGACCTGCCCTACCCAGATCCCACAATAGGACAGTACATGATCCAGAAGGTGGTCCCCCAGGCCACGGGCGAGAGttctaaagtaaaagtaaaggtgAGGATTAACATCCATGGGATCTTCAGTGTGTCCAGTGCCTCACTAGTGGAGTTGCAGAAGCCTGAAGAGGGGGAGGAGCCTATGGATACAGAGCAGACTTCATCACCGACTGCAGAGAAGGAGGAAGAGaaccaaaagaaaaaaaaaaaaaaaatgcaggtggATGAAGATCAGCAGAAGTCTCCAGATGATGGACAGAAGgaaaatggagagaaaaaatCAGAATCTGATGAAATGGAGACATCAGAAGAAGGCAAACAAGAGAAGAAGACTGATCAGCCGCCACAAGCTAAAAAGCCTAAAGTCAAGACAAAAGTGCTGGAGCTGCCCATTGAAAACAATCCGCAGTGGCAGCTGGCGATCGAGATGCTTAATCTGTTTGTGGAGAACGAGGGAAAGATGATCATGCAGGACAAGCTTGAAAAAGAGCGCAATGATGCCAAGAACAACGTGGAGGAGTATGTGTACGATATGAGGGACAAACTGCACGGCATGTTTGAGAAGTTCATCACTGAAAGTGACAGAGACGCGTTCTCATTAAAACTGGAGGACACAGAGAACTGGCTGTATGAAGACGGAGAGGACCAACCTAAGCAAGTGTACATTGACAGGCTGGCTGATTTAAAGAAACTGGGCCAACCTGTTCAGGACCGATACTCAGAGTATGAGGAGCGACCAAAGGCTTTTGAGGAGCTGGGGAAACAGCTTCAGCAGTACATGAAAATTGTGGAGGCCTTTAAAATGAAGGACGAGCCGTATGATCATTTGGACGAGGCGGAGGTGCAGAAAGTGGATAAGATGGTGGGTGAGGTTATGATATGGATGAACAGCAAGATGAATCAGCAGAGTAAGCAGAGTCTGAATGTGGATCCAGTGGTGAAAGCTGCAGAGATTATAGCGAAAACAAGGGAGCTGTTCTCCACTTGCAACCCCATCGTGACCAAACCCAAGCCAAAAGTGGAGCTGCCAAAAGACGAAAAACCAGCAGAACAGAATGGACCAGTCAACGGGCAGGAGAGCACTGAAGCCGAGGCTGGGGCCAACGAGAAAGTGCCTGCCGAAGGCACCAACTCCAAACCAGAAATGGACCTTGACTAAGTTGGCTGTGTCCTCCTGTCTTACCCACCCCTCGCCGCTCAAATCATTCCATCTCCCCTGCCATGAGGTTGTTTCGACAGTCAGAATGATTAGTGGCTACATGGTGCATGTTCATCCTtttgttaaaaatgattaaataaataaaccgaAAGCGTAATGCAATAAGAGTGCTCTTTGACATCAAATGCTGTGTGCGCACATGGTTGAGTATATGTGGTGTACTGCGAAATATTTGAATCTGTGGCAACTGTtgggttttaataaatattaagtttAAAGTGTGA

Function

symbol description
hspa4 Predicted to enable ATP binding activity. Involved in chaperone-mediated protein complex assembly and protein insertion into mitochondrial outer membrane. Located in cytosol and extracellular exosome. Implicated in Chagas disease. Biomarker of chronic obstructive pulmonary disease; rheumatoid arthritis; type 2 diabetes mellitus; and ulcerative colitis.

NR:

description
PREDICTED: heat shock 70 kDa protein 4-like

GO:

id name namespace
GO:0005524 ATP binding molecular_function

KEGG:

id description
K09489 HSPA4; heat shock 70kDa protein 4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007258574.3 True 3056 mRNA 0.49 19 7699890 7719056

Neighbor

gene id symbol gene type direction distance location
LOC103026262 gnpi1,gnpda1,LOC103026262,LOC108430975,LOC107741117,LOC107664733,LOC107554697,LOC104938351 coding downstream 2982 7690185 ~ 7696908 (-)
LOC103026574 ndfip1,LOC103026574,LOC108430976,LOC107756695,LOC107677723,LOC107664757,LOC107553337,LOC108274678,LOC105903889 coding downstream 14524 7676287 ~ 7685366 (-)
LOC111193047 LOC108430978 coding downstream 111308 7567400 ~ 7588582 (-)
LOC103030823 LOC108430979 coding downstream 213252 7446578 ~ 7486638 (-)
kif3a kif3a coding downstream 255017 7424683 ~ 7444873 (-)
med12 med12,LOC106604460 coding upstream 7562 7726618 ~ 7768361 (-)
enox2 enox2 coding upstream 148145 7867201 ~ 8174894 (-)
LOC103029481 fgf18a,LOC103029481,LOC108430953,LOC108274431,LOC107747128,LOC107660900,LOC107754488,LOC105893086 coding upstream 1016021 8735077 ~ 8758128 (-)
mfsd7 mfsd7 coding upstream 1533810 9252866 ~ 9276501 (-)
cplx1 cplx1,LOC107751330,LOC107697630,LOC107660193,LOC107587069 coding upstream 1825882 9544938 ~ 9625510 (-)
G71975 NA non-coding downstream 33338 7656662 ~ 7666552 (-)
G71914 NA non-coding downstream 178149 7521532 ~ 7521741 (-)
G71911 NA non-coding downstream 201407 7497781 ~ 7498483 (-)
G71900 NA non-coding downstream 356456 7343234 ~ 7343434 (-)
LOC111193041 NA non-coding downstream 397582 7301826 ~ 7302308 (-)
G72022 NA non-coding upstream 159623 7878679 ~ 7879316 (-)
G72023 NA non-coding upstream 206338 7925394 ~ 7929086 (-)
G72118 NA non-coding upstream 597595 8316651 ~ 8316977 (-)
G72312 NA non-coding upstream 657031 8376087 ~ 8376585 (-)
G72315 NA non-coding upstream 681812 8400868 ~ 8401244 (-)
LOC103027657 LOC108430978 other downstream 109336 7551185 ~ 7590554 (-)
G71862 NA other downstream 386964 7309775 ~ 7312926 (-)
G71826 NA other downstream 642247 7057110 ~ 7057643 (-)
G71771 NA other downstream 875134 6777239 ~ 6824756 (-)
LOC103035656 LOC103035656,LOC108414340,LOC108274783 other downstream 1858183 5829621 ~ 5841707 (-)
LOC103030515 wu:fb13g09,LOC108441781,LOC108274673,LOC107554714,LOC107716370,LOC107677527 other upstream 54839 7773895 ~ 7842280 (-)
G72336 NA other upstream 920482 8639538 ~ 8645601 (-)
G72449 pcdh2g29,LOC108438834,LOC108438829,LOC108274931,LOC108438833 other upstream 1446822 9165878 ~ 9174309 (-)
G72453 NA other upstream 1469343 9188399 ~ 9225559 (-)
elp1 ikbkap,LOC107751344,LOC106611638,LOC105419749 other upstream 2081999 9801055 ~ 9824519 (-)

Expression


Co-expression Network