LOC103029142 (LOC108435612,LOC108274509,LOC107571533,LOC107571277,LOC107730909)


Basic Information

Item Value
gene id LOC103029142
gene name LOC108435612,LOC108274509,LOC107571533,LOC107571277,LOC107730909
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 4857848 ~ 4884488 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_015603237.2
AGGCCACGAGGCACAACGAGACTGAAACAGCCCGCGTGCAGTGCAGAAACCACAAGCAGGAGGACTCCGAAGCCGGGAGTAAAAGTACCAACACAGACAGGAGCAGCAGAGAGATAGAAAAGCCCGAGGATCGGCAGCCGCTGAAAGAACACTTTGTTTGTTGTGCTGGTTCTGCTGGAGCTCCGTCGCTTGCTGCTGGACTCCCAGCCCCAGAGCTGGACCTGCAGCAGGAGAGGTTGGTAGTAAACTCTCTGGAGTTTGGTCAGAGTCGCTTCATAGCCGTTTGAACTCTGCTTGTGGAACAAGGACTGCACTGAGACCAGGACTCTCAGTCTGAAAACTTTTACGCACTTTTACGCACTTCTGGACTCTCGCGTCTCGAGCGCGCTCTCGAGCACGCGTCTCGACAACAGCTCTCATCAACTTGCGAGCGTGGAGGAAAAGAAGTTCATTCTGCCTTCCTTCAGCCTTTGAGGTCGATCGAGATCGAGAAACGAGACAGCGAGAGCAGAAATCGTGGATGGAGAGAACTTCTGAAAGATCTTCTTCTTAGAGATCTGCTACAGACAAATATGGCCCAAACATTCTAGTGAAGTCTTCAACCCTCCATCCAAACCAACTTAGTGCACAAAAGTAAACAACCAAAAcaagaaagaacaagaaaacCTACAAGTTTAAACCTAGAACAGGAAACTTGCTCAAGCAAAAAAGAGAGCAGAAGACATCCAGATCAGTTCTATCGATCCATCCATCCTCTAAAAGCAAGAAGATGGAGTGGAGAACCCTCTCCTTGACCGGCCTTTCCTTGGCCCTATGTTTGTGTACTCTTATCGGCCTGACCCACGCTACGCCCTCCGGACCTGCCTCAGCCACCTGCGCCACCCTGGAACAGAGTCGCTTCTTCGGATTGTTCTCCTCCAAAACGGCCCTGCATTCGGCTCCCTGCTCCTGGACCCTGCAGAACCCAGATCCCCGCCGCTACACCGTCTACATGAAGATCACTAAGCCCACTGAGTCCTGCACCCCTCGCCAGATCAAGACCTTCCAGTTCGACTCCTTCTTGGAGACTTCACGCACCTACCTGGGCATGGAGAGCTTCGATGAGGTCGTGCGACTCTGCGATGCTACCTCCTCTGTGGCCTACCTGGAGTCCAGCAAGCAGTTCCTGCAGGTGAGGAAAGTGGTCCCTCGCATTGGCTCTGAGCTTCTGGAGATTGAGGAAGGTTCTGACGATGAAGGCAGCCAGTTCAGTGCAGAGTTCCTGGTTGTTGGCAAGAGGAATCCTAGTGTGCCTGCCTGCGAGATGCTCTGCAAGTGGCTGGAAGACTGCCTGACGACCAGTACCCACGGTAACCCATGTGGTATCATGGCAACCCCATGCCAGTGCTGGGAACCACCCAAGAAGAGGGCAGGTGGCTGCTACAGGGGCGGAGTCTACGTGGACAAGTGTTCATCAACCATCAGAGACAGCAACAGGGATGCCGAGATCATGAAGGGCTGGGCTGGTTGGACTCACTGGTCCGAGTGCAGCAATGAGTGCGGAGGTGGAATCCAGGTTCGCAGCAGGGCATGTCAACCCAAGGATGGCATCTGCGAGGGCGTAGTTGAAGAAGCGCGTGCCTGCAACCCCCAACCCTGCATTGGTAAAGTTCGCCAGCGTAGCCAGGGTCTTCGTTCCATCATTGGCCAGAGGAGGGACAATGGAGAGGAGAGCAGCCTTCTGCAGGTTCCTCAACCAGAAACAAATCAAGATCAGTGGTCTTCATGGAGCGGTTGTTCCGTGAGCTGTGGTGAGGGCTGGCAGAGCCGAACACGCAACTGCATGACATCCGCACTTACCACACTGTGTACCGGCCCCCTGAGAGAGAACAGACCCTGCAACAACTCTGTTGTTTGCCCAGTGAATGGAGCTTGGGATGAGTGGGCACCCTGGAGTTTGTGTTCATCCACCTGCGGACGTGGCTACCGTGACCGTGTCCGCGTCTGCAAGCCACCCAATAATGGAGGAGAACCGTGCAGGGGCCCCACCAAACAGACCAAGTTCTGCAACATCGCTGTGTGCCCTGTCGATGGTTCCTGGAACGATTGGTCCGCCTGGAGTCCATGCTCTGCTTCCTGCTCCAATGGTACGATGCAGCGCACACGCGAGTGCAATGGCCCATCATATGGAGGCTCAGAGTGCAGAGGAGACTGGCGTGAGACTAGCAACTGCTTCCTCAAAGACTGCCCAGTGGACGGGAGATGGCTCTCCTGGAGCTCTTGGGGCAGCTGCAGCAAGACATGTGGAGGAGGAAGCCAGCAGAGGCAGAGAGTGTGTGAAGGGCCATTTTTTGGTGGAGAACCTTGTGTTGGTGACAAAGCTGAACTTAGACGCTGCAATGAAAAGAGATGCCCAGAACCCCATGAGATCTGTGTCGAGGAAAACTATGGCAGTGTGGTGTGGAAGAGGACTCCAGCTGGTGACACTGCAGCTGTTCCTTGCCCCTCTGATGCCACAGGCATGGTCATTCGACGTTGCACCCTGGATGCCGTAGGCTTGGCCTTCTGGGAGAACCCCACCTACGTCAAGTGCATCTCTAAGGAGTTTGAAGACATCCAGGAACTGGCTCGTGAACACTTCAATAAGTCGCAGAAAGGTGTGTTAGTCGATGGTGTGTCTGAGATGCTCTCCAGGCTGAGAATGACCTCAGATGATGGGACGAAGTACAGTGGAGACCTGCTGGCAGTCATGGAAGTTCTGAAGAACACTACTGAAATCTTCCGCGGATCTGGTTACAGCCTCAGTAACGCTGACGTTGAGAACTACGCTCAGACAATCAGCAATTTACTGAAGGAGGAACACCATGGCAAATGGGAAGAGACACAGCtgATGGGAGGCAGCATCAAGGACTTCTTCAGCCTAATTGAAGACTTCATTGACATGATCGGCAAGCAGATGAGAGATTTCCAAGACATTTATGAAGTGACTGAGAACCTTGAGCTGAGCATCCAAAAGCGTCCCAAAACCATGACCTCCGATGTGACTTTCCCAATGAAGGGATGGAGAGGCATGATGGAGTGGGTGCGCAACTCAGAAGAAAAGATCGTTGTGTCCCGCAATGCATTGAGTCTGGATGTACCAGGTGCCGAAGACAGCACAGGCTTTGTGACTGGCATCGTTCTGTACAGAAACCTGGGCCCTATCCTGTCTCTGCAGAGCAACAGCACCCTGCTGAACTCCAAGATTGTCACTGTAACTGTGAAGCCCAACCCTGGTTTCCTGACTGCACCTGTGGAGATCGAGTTCCCTCACCTGCACAATggcaCTATCAATGAGACATGCATTGCCTGGGACGAGAGCGAGACTGCTTCTCTGCTGGGCTCGTGGTCGGCTCGCGGCTGCAGAGCGCTCGCGCTCGACTCCAGaaccaaatgtgtgtgtgactcgCTCTCCACCTTCGCCATCTTAGCGCGGCCAAACCCAGACTCGAACATGGATAAGAACCTGTTGCCGTCGGTTACGATGATCGTGGGATGCGGAGTGTCATCCCTgacactgctgctgctcatcATCATCTATGTCTCTGTTTGGAAGTACATCCGCTCAGAGCGCTCGGTCATCCTCATCAACTTCTGCTTGTCAATAATCTGTTCCAATGCGCTCATCCTGATTGGTCAGACTCAGGCTCGCAACAAGATCATGTGCACCCTGGTCGCAGCCTTCCTgcacttcttcttcttgtccTCTTTCTGCTGGGTTCTGACCGAGGCATGGCAGTCCTACATGGCCGTGACTGGGCGCCTGCGCAACCGGATCATCCGCAAGCGCTTCCTGTGCCTGGGCTGGGGACTTCCTGCCCTGGTGGTGGCCGTCTCTGTGGGATTCACCAAGGCCAAGGGATACGGCACAGTCAACTACTGCTGGCTGTCTCTTGAGGGCGGGCTTCTCTACTCGTTTGTTGGTCCCGCAGCTGCCGTAGTCCTGGTGAACATGGTGATTGGTATTCTGGTCTTTAATAAGCTGGTGTCCAAGGATGGCATCACCGATGTAAAGCTGAAGGAGAGAGCAGGGGCGTCTCTCTGGAGTTCCTGTGTGGTTCTTCCTCTGCTGGCTCTCACATGGATGTCGGCAGTCCTGGCAATCACAGACCGGCGCTCGGCTCTCTTCCAGATCCTCTTCGCCGTCTTCGACTCGCTCGAGGGCTTCATCATCGTCATGGTTCACTGCATCCTGCGCAGAGAGGTTCAGGAAGCTGTGAAGTGTCGCGTCGTCGACCGCAAGGATGACGGGAATGGAGACTCTGGGAGCTCGCTTCAGAACGGCCACACACAGCGCCTGGGTGACCTCGAAAAGGATGCTGACTCCAACAGAACAGGTGGCATGAAGAGCTCTTCAGAGGAGAAGATGCCTCCTCCCCAGATGCCTCTACCCATGGGACCCAACTTCCACACCCTTCCCTCCAACCCCAGCGCCAAGTCACACATGCAGGCCGTCCCCGAGTACTCCAGCCACACGCTGACCCTGCGGAGGGAGAAGGGCCGCGGCGTGGACCCAACCTGCGGAAAGCCCGTCTACGTGTGCGACAGCGACATCTTCAAGCAGATGGACGTGGACCTCGTGAGAAGCCAGACCGAAGGCAGCGGCATGGACGCCGGCGGCTACGTCCTCATGCCAAACACCACGTCTACCCTGCGCTCCAAGCCCAAAGAGGAGCTGTCCTCCACCACCAAGTACAACATCGGCGTGGAGCAGCTGCCTCAGGCCCGTCTCATGCACATGAGCGGCGGCTTCGCCGAGCCCCAGGCCGCCTACGCCAGCAGGACGCTTCCGGCCGACCGCCTCAGCGTTTCCTACTCGGAGGAGCGAGACTCGCCCGTCCAGAACCTGCACAACATCTCCAGCGAGAGCCACATGACCAGCAGCCTGGGAGACACCTTTGACTCCATGAACTCCATGATGTCCAAGAGCGAGACCATCTCCACGCTGTCTATGAGCTCACTGGAAGTTAGTGAAGGGAGGCAGAAATCTCGTTATGCTGAGCTCGACTTTGAGAAGATCATGCATACGCGGAAGCGCCACCAGAACATGTTCCAAGACCTCAACAGAAAAGTACACCACGCTGAGAAGGACAGAGAGTCGCCTGCTTCTGACAGCAAGtctgtgaggtGGAGCGTGTCTTCTGCGGGAAGCGACAAAACCAACCACAGCGACAAGCAGCAGGCCCCAGGAGAGCGGTCGTGGGAGAGCATGCCCCGGTCGCAGACGTCGCCCCCGGCCTGGGTACGGAAAGACCTTGAGCCCCTGGCAGCGTCCCCTCTTGAACTGCCCACCGTGGAGTGGGAAAAGGCCAGCACCACCATCCCTCTGGTGGGCCAAGACATCATCGACCTGCAGACGGAGGTGTGAAGGCCTTGCTGTGAAAACCCCTGTACACCCCTGGCTCCTTTTGGTTTgggaaagaaggaaaagaggGCAGATTCTGAAGGGAATTGGGGAAGCGGTGGAAGCTGGATAGATGCAGAAGGATGAAGGAGATGAAGAGAGGAGTAGAATGAAGAgaaccaaaaaaaaggaaaaggaaaaaaaaagatggacaaaagagagaggaagaaaaggtGTAAGCACAAATTGTGAATTCATGTATCCTCAAGCTTCACCAGTAGCTGTCAGGAAGTAGCATTTGATGGTAACGTTAGTGGAGACGTGGAGATTTGATTGGTTCTCCTCCGGGTCCAAAGTGGTTGGCGAAGGTGGTTCCGCCGAGAGCTTCTCCCATTACTCTTCCGTCTGGTCCAGGAGAGGTGTGGTCTTCATGCCTGTGCCTTTTCAGTTTTTCCTTCGACTTCAGCGTGGAAAGGGGCGGGGCCTCTGGCCAAAGTACCGTCCGATCGCTCGGCTGCTTTGAGCTTGGCCTCTTCGGGGGCCTCTTCCAGCACCTCCTCTCCGCTTGCTAGTGGAGGAAGACGAGCGTCGAGCGACCTCCCAGCAGCCTCTGGGGTATTTCCAACCCTGCGGTGGATGGACGCATGTTTTTGCGAGATGTTTACGCTGTGGTTTGTGGTTTTTAATCGCTTTGATGTAGAGCTGCTTCTATGGAGCTTATTATAGACTCTTCCACTGAACTCTATTCAGAGTCTCTCAGCATAGCTTTTCTGGACTCGTATTCAAGGCTTGTATAGGACTATAAGAGCTGAACATCTGTTGTTGTTATCTTCTATTATTGTTGCAGTTATTATCATTGATTTTTATGTGTTCTTATGTGAATATCATTATGGATATGATTTCTATTGAATGTTatgtttctttattctttattttctttggtTCGAAGATGTTTTGTCACTGATTTTCCAAATAAGTTCAAGTTTTAAGTCAAATCACTCATCAAATCACCAGatcccaaaaaaaagaaatcatctTCAAGGCATAATGAGCTTTTCTTAAGGAGAAAGAGCAGAGGAGAGTGGAGAGGAAGTGGAGGTGTGGCTTCACAGAGACACTCAAACTCAAGACCTCATGCCCCACTTGCATTACGCCACAGCTGCGTCTGGAGCAACCCTGGTGCATTGTTCCCTGGTACCAAACGGCCGGACGCCAGTGACTGTGTTGCGGTGGATACGGATTGTCCTCTGCTGAAGGCCTCATTGGATAATTTGCATCAAATTTTTTGGTTGTGTTTCGCCTCCATTTCCGCTACTTCAGCTCTTTCTACAGCCTTGCGAACTATAGacgaaaaaaagaaatgcattaTTAGGAAACCTCATAGACCATAGCATTGGGCCTTGAGGCACCTCAGCACATCCTTAACTGAGGCTGTTCTGGCCCTGCCTCTCCCATGAGCTTCATCAGAACTTCCACAGTGCCAGCTTGTAGAGACTGCAAACTCTCAGACTCTCACGTTGTGCAGACAGAGCGAAAGATAACTGTGCAATATGACGACGGACGCTTGATGCTCAAGCGAGGCTGATGTCAGACCCttgacatatttttttgttatttccagAGATTTTTGTACTATGTTTATAGAGCATATAGACACATTTATTATGAGAAGAACACTGTATAAGGACTTTGCGTTAGCAACGATCAAAGATTCTTTCACCATGAGGATGTAATGGATGAAAGCACATGACATTGAGTCCTGTGACCAATATtaattttggaaaatgaaaatagatatattatatatatatattatatatatatatatatatatatatatataaagaataatAGACCATAGAGTTTCAGGTAAATACCTTTGGTTTTCTACTTGATGCCCCACCCCCTCCCCATTGTCAGATTACTGAATTGCCAGTCCTCTGTATTGTCCTGTGTTATGGAACTCTATGTGTCACCCTATGTGCCAATAACCTTCCCTCTCGTTCCAGTCTTACACGGTACAGGTGTTCAAGTTCCTACCTGAATGTTTTCTGTCCTTTTTCATTTCTATgtctttattcttttatttttttccacgtGTACAGTTTTCAGAGCACAAAATGAATATGTGTTAtttctaataaaagaaaaatctataTTA

Function

NR:

description
PREDICTED: brain-specific angiogenesis inhibitor 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_015603237.2 True 7523 mRNA 0.52 31 4857848 4884488

Neighbor

gene id symbol gene type direction distance location
dpy19l4 dpy19l4 coding upstream 518766 4306665 ~ 4339082 (+)
LOC103045063 LOC108435620 coding upstream 642132 4132022 ~ 4215716 (+)
LOC103042852 LOC108274605,LOC108435589,LOC105028044 coding upstream 751885 3955008 ~ 4105963 (+)
LOC103032643 deptor,LOC108442483,LOC108274614,LOC107685573 coding upstream 922744 3923972 ~ 3935104 (+)
LOC103043978 NA coding upstream 1418693 3420240 ~ 3439155 (+)
hnrnpr hnrnpr,LOC103029778,LOC105909056 coding downstream 44689 4929177 ~ 4935065 (+)
dnajc8 dnajc8,LOC102775708 coding downstream 58718 4943206 ~ 4954889 (+)
LOC111193076 NA coding downstream 71791 4956279 ~ 4957026 (+)
LOC111193046 NA coding downstream 94979 4979467 ~ 4980022 (+)
cfap69 cfap69 coding downstream 164018 5048506 ~ 5067507 (+)
G71215 NA non-coding upstream 13635 4744153 ~ 4844213 (+)
G71209 NA non-coding upstream 179126 4678331 ~ 4678722 (+)
G71201 NA non-coding upstream 235608 4621818 ~ 4622240 (+)
G71194 NA non-coding upstream 346451 4510801 ~ 4511397 (+)
G71132 NA non-coding upstream 396706 4445766 ~ 4461142 (+)
G71244 NA non-coding downstream 56921 4941409 ~ 4942117 (+)
G71248 NA non-coding downstream 73668 4958156 ~ 5006225 (+)
G71246 NA non-coding downstream 79483 4963971 ~ 4968919 (+)
G71256 NA non-coding downstream 106364 4990852 ~ 4993179 (+)
G71260 NA non-coding downstream 116603 5001091 ~ 5043758 (+)
LOC103028288 LOC108435610,LOC108275213,LOC106520856 other upstream 415917 4357065 ~ 4441931 (+)
LOC111193071 NA other upstream 1283090 3409670 ~ 3574758 (+)
G70846 NA other upstream 1479238 3377684 ~ 3378610 (+)
LOC103024487 syngap1a,LOC108275193,LOC108439800 other upstream 1565373 3121918 ~ 3292475 (+)
G70604 LOC108436838 other upstream 2498619 2358883 ~ 2359229 (+)
atpif1 atpif1,LOC105912502,LOC107571275,LOC104922170,LOC107730904,LOC103378180 other downstream 31325 4915813 ~ 4921820 (+)
G71247 NA other downstream 71810 4956298 ~ 4980011 (+)
G71249 NA other downstream 79214 4963702 ~ 4967907 (+)
G71414 gstp1 other downstream 615420 5499908 ~ 5505638 (+)
LOC103037414 NA other downstream 788230 5672718 ~ 5678874 (+)

Expression


Co-expression Network